RNA–Protein interactions for RNA: ENST00000518944.1

CHCHD7-208, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 7, human

TSL 2

Gene CHCHD7, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHCHD7-208	ENST00000518944	KIZ	Q2M2Z5	673 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	SLC35F1	Q5T1Q4	408 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	CRIP3	Q6Q6R5	217 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	DPP8	Q6V1X1	898 aa	Predicted RBP	4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	EP400NL	Q6ZTU2	488 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944		Q6ZUG5	572 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	USP53	Q70EK8	1073 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	NOP9	Q86U38	636 aa	Known RBP	4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	REXO1L1P	Q8IX06	675 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	DNER	Q8NFT8	737 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	PIP4K2C	Q8TBX8	421 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	DCAF4	Q8WV16	495 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	LMF1	Q96S06	567 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	ZFYVE21	Q9BQ24	234 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	HIRIP3	Q9BW71	556 aa	Predicted RBP	4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	CD248	Q9HCU0	757 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	ARHGAP20	Q9P2F6	1191 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	FBXL7	Q9UJT9	491 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	TESMIN	Q9Y4I5	508 aa		4.56	□□□□□ -1.68
CHCHD7-208	ENST00000518944	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944		B2RBV5	119 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	PATE3	B3GLJ2	98 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944		H0Y858	1186 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	AMH	P03971	560 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	APP	P05067	770 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	GRK2	P25098	689 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	GRK3	P35626	688 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	PPP2R2A	P63151	447 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	GRIN1	Q05586	938 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	PRKD1	Q15139	912 aa	Predicted RBP	4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	OTOP3	Q7RTS5	596 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	DTX3	Q8N9I9	347 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	SGSM3	Q96HU1	749 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	IER2	Q9BTL4	223 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	ZNF747	Q9BV97	191 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	PHF20	Q9BVI0	1012 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	JAM3	Q9BX67	310 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	ZNF341	Q9BYN7	854 aa		4.55	□□□□□ -1.68
CHCHD7-208	ENST00000518944	ARNTL	O00327	626 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	GJB6	O95452	261 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	CKM	P06732	381 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	FAH	P16930	419 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	ACVRL1	P37023	503 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	ARID5A	Q03989	594 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	TUSC3	Q13454	348 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	USP10	Q14694	798 aa	Known RBP	4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	SKIDA1	Q1XH10	827 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	PAN2	Q504Q3	1202 aa	Known RBP	4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	ZFPM1	Q8IX07	1006 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	IFNL3	Q8IZI9	196 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	ALG1	Q9BT22	464 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	SLITRK6	Q9H5Y7	841 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	ZFP69B	Q9UJL9	534 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	DSE	Q9UL01	958 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	SLC4A7	Q9Y6M7	1214 aa		4.54	□□□□□ -1.68
CHCHD7-208	ENST00000518944	FAM47E-STBD1	D6RA91	191 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	CUTA	O60888	179 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	KLHL18	O94889	574 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	GLRB	P48167	497 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	RAC3	P60763	192 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	SLC10A6	Q3KNW5	377 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	NUDT10	Q8NFP7	164 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	WDR48	Q8TAF3	677 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	UHMK1	Q8TAS1	419 aa	Known RBP	4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	NUDT11	Q96G61	164 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	C1orf159	Q96HA4	380 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	AJUBA	Q96IF1	538 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	LRRC37B	Q96QE4	947 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	KCNJ15	Q99712	375 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	AARSD1	Q9BTE6	412 aa	Known RBP	4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	CARD11	Q9BXL7	1154 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944	HS3ST3A1	Q9Y663	406 aa		4.53	□□□□□ -1.68
CHCHD7-208	ENST00000518944		A0A1W2PQU0	124 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	KNG1	P01042	644 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	ETFB	P38117	255 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	GPR85	P60893	370 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	PFKP	Q01813	784 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	CDSN	Q15517	529 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	ZMAT1	Q5H9K5	638 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	SPDYA	Q5MJ70	313 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	DENND5A	Q6IQ26	1287 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	LBX2	Q6XYB7	198 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	NLGN4X	Q8N0W4	816 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	LRRC47	Q8N1G4	583 aa	Known RBP	4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	STPG3	Q8N7X2	389 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944		Q8TCH9	128 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	CLEC4D	Q8WXI8	215 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	IPO9	Q96P70	1041 aa	Known RBP	4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	ADO	Q96SZ5	270 aa		4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	ZFR2	Q9UPR6	939 aa	Known RBP	4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	TMA7	Q9Y2S6	64 aa	Known RBP	4.52	□□□□□ -1.69
CHCHD7-208	ENST00000518944	PRODH	O43272	600 aa		4.51	□□□□□ -1.69
CHCHD7-208	ENST00000518944	DLX3	O60479	287 aa		4.51	□□□□□ -1.69
CHCHD7-208	ENST00000518944	CNOT4	O95628	575 aa	Known RBP	4.51	□□□□□ -1.69
CHCHD7-208	ENST00000518944	FGFR1	P11362	822 aa		4.51	□□□□□ -1.69
CHCHD7-208	ENST00000518944	COL6A1	P12109	1028 aa		4.51	□□□□□ -1.69
CHCHD7-208	ENST00000518944	COMT	P21964	271 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms