RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 SSBP05455 408 aaKnown RBP eCLIP9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 SPATA31C1P0DKV0 1188 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 CYP3A7P24462 503 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 SH3BP5LQ7L8J4 393 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 CATSPER3Q86XQ3 398 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 SH3GL2Q99962 352 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 POLD4Q9HCU8 107 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 AJAP1Q9UKB5 411 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 ATP6V0A2Q9Y487 856 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 MYO1CO00159 1063 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 SHOX2O60902 331 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 NPM3O75607 178 aaKnown RBP9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 PALMO75781 387 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 FTCDO95954 541 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 MCM3P25205 808 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 JAG1P78504 1218 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 NAB2Q15742 525 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 MAP9Q49MG5 647 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 SND1Q7KZF4 910 aaKnown RBP eCLIP9.33□□□□□ -0.927e-7■□□□□ 8.6
CTNNA1-210ENST00000518825 CACNA2D4Q7Z3S7 1137 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 GPBP1Q86WP2 473 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 TBC1D5Q92609 795 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 SYN2Q92777 582 aaPredicted RBP9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 IKZF4Q9H2S9 585 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 SMCHD1A6NHR9 2005 aa9.33□□□□□ -0.92
CTNNA1-210ENST00000518825 DDTLA6NHG4 134 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 OPLAHO14841 1288 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 FGFR1OPO95684 399 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 SERPING1P05155 500 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 FAM153BP0C7A2 387 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 ZBTB48P10074 688 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 TCP1P17987 556 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 MRPL12P52815 198 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 FAM153CQ494X1 144 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 HERC4Q5GLZ8 1057 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 IRF2BP2Q7Z5L9 587 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 SP8Q8IXZ3 490 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 AFAP1L1Q8TED9 768 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 CEP63Q96MT8 703 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 TSG101Q99816 390 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 EMILIN3Q9NT22 766 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 STIM2Q9P246 746 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 ADAMTS1Q9UHI8 967 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 FAM153AQ9UHL3 310 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 FAM86B1E9PN63 330 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 MEIS1O00470 390 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 MPHOSPH10O00566 681 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 PPEF1O14829 653 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 FAM86B2P0C5J1 330 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 ARID5AQ03989 594 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 GIT2Q14161 759 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 SEPT2Q15019 361 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 CCDC40Q4G0X9 1142 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 TDRD12Q587J7 1177 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 TTMPQ5BVD1 217 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 GPATCH4Q5T3I0 446 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 SFMBT2Q5VUG0 894 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 EPM2AIP1Q7L775 607 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 RNF10Q8N5U6 811 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 FAM133AQ8N9E0 248 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 OLIG1Q8TAK6 271 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 RBM46Q8TBY0 533 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 COA1Q9GZY4 146 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 AIPL1Q9NZN9 384 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 SWAP70Q9UH65 585 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 RRP15Q9Y3B9 282 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 PCDHGC5Q9Y5F6 944 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 MYO3BQ8WXR4 1341 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 ESYT3A0FGR9 886 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 GRID2IPA4D2P6 1211 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 ANKRD65E5RJM6 399 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 EEF2P13639 858 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 GCFC2P16383 781 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 SLC9A1P19634 815 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 KCNA1Q09470 495 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 KCNH2Q12809 1159 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 ADAM9Q13443 819 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 SLC18A3Q16572 532 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 MEI1Q5TIA1 1274 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 SLC30A10Q6XR72 485 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 ARHGAP27Q6ZUM4 889 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 CYP2W1Q8TAV3 490 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 PIK3R5Q8WYR1 880 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 ARL8AQ96BM9 186 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 NOX5Q96PH1 765 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 GOLPH3Q9H4A6 298 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 PCDHA1Q9Y5I3 950 aa9.32□□□□□ -0.92
CTNNA1-210ENST00000518825 GRIN2DO15399 1336 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 GOLGA6BA6NDN3 693 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 RSPH10B2B2RC85 870 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 RSPH10BP0C881 870 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 CARSP49589 748 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 SLC9C1Q4G0N8 1177 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 ZNF571Q7Z3V5 609 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 INPP4AQ96PE3 977 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 ALS2CR12Q96Q35 445 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 ANO3Q9BYT9 981 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 LRRC27Q9C0I9 530 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 NT5C3AQ9H0P0 336 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 DHX36Q9H2U1 1008 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms