RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 HERVK_113Q902F9 699 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 ARHGAP45Q92619 1136 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 ATG4CQ96DT6 458 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 RIOK1Q9BRS2 568 aaKnown RBP7.3□□□□□ -1.24
PABPC1-207ENST00000518716 LRFN3Q9BTN0 628 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 API5Q9BZZ5 524 aaKnown RBP7.3□□□□□ -1.24
PABPC1-207ENST00000518716 MRPL18Q9H0U6 180 aaKnown RBP7.3□□□□□ -1.24
PABPC1-207ENST00000518716 C11orf16Q9NQ32 467 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 SMC4Q9NTJ3 1288 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 REV3LO60673 3130 aa7.3□□□□□ -1.24
PABPC1-207ENST00000518716 PARP14Q460N5 1801 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 MYADML2A6NDP7 307 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 DCDC2CA8MYV0 355 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 CTAGE5O15320 804 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 SLC25A27O95847 323 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 SNAI1O95863 264 aaPredicted RBP7.29□□□□□ -1.24
PABPC1-207ENST00000518716 CD4P01730 458 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 PGK2P07205 417 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 CT47B1P0C2W7 299 aaPredicted RBP7.29□□□□□ -1.24
PABPC1-207ENST00000518716 FCER1AP12319 257 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 CSF2RAP15509 400 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 CYP7A1P22680 504 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 GRNP28799 593 aaKnown RBP7.29□□□□□ -1.24
PABPC1-207ENST00000518716 PPIGQ13427 754 aaKnown RBP eCLIP7.29□□□□□ -1.24
PABPC1-207ENST00000518716 CCINQ13939 588 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 KCNA10Q16322 511 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 TNNI3KQ59H18 835 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 OGFOD2Q6N063 350 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 TMED8Q6PL24 325 aaPredicted RBP7.29□□□□□ -1.24
PABPC1-207ENST00000518716 MAMDC4Q6UXC1 1216 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 TTC6Q86TZ1 520 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 CERS3Q8IU89 383 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 FAM126BQ8IXS8 530 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 AGGF1Q8N302 714 aaeCLIP7.29□□□□□ -1.24
PABPC1-207ENST00000518716 MSL3Q8N5Y2 521 aaKnown RBP7.29□□□□□ -1.24
PABPC1-207ENST00000518716 MIGA1Q8NAN2 632 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 SLC43A3Q8NBI5 491 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 PPM1EQ8WY54 764 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 TTC9Q92623 222 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 UPF3AQ9H1J1 476 aaKnown RBP7.29□□□□□ -1.24
PABPC1-207ENST00000518716 EPHX3Q9H6B9 360 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 STARD7Q9NQZ5 370 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 DBNLQ9UJU6 430 aaKnown RBP7.29□□□□□ -1.24
PABPC1-207ENST00000518716 YBX2Q9Y2T7 364 aaKnown RBP7.29□□□□□ -1.24
PABPC1-207ENST00000518716 TMX2Q9Y320 296 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 FPGT-TNNI3KV9GXZ4 949 aa7.29□□□□□ -1.24
PABPC1-207ENST00000518716 SYNRGQ9UMZ2 1314 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 DNAJC25-GNG10A0A024R161 153 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 ERC2O15083 957 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 ADCY6O43306 1168 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 AKR1A1P14550 325 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 TFF2Q03403 129 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 G3BP1Q13283 466 aaKnown RBP eCLIP7.28□□□□□ -1.24
PABPC1-207ENST00000518716 RAB30Q15771 203 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 CCDC85BQ15834 202 aaPredicted RBP7.28□□□□□ -1.24
PABPC1-207ENST00000518716 PSRC1Q6PGN9 363 aaPredicted RBP7.28□□□□□ -1.24
PABPC1-207ENST00000518716 ELMSAN1Q6PJG2 1045 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 NCAPG2Q86XI2 1143 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 RIOX2Q8IUF8 465 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 SSH3Q8TE77 659 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 NUP133Q8WUM0 1156 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 TANGO6Q9C0B7 1094 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 VCPKMTQ9H867 229 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 CABP5Q9NP86 173 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 IL23AQ9NPF7 189 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 ZFATQ9P243 1243 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 STOML1Q9UBI4 398 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 ZNF214Q9UL59 606 aaPredicted RBP7.28□□□□□ -1.24
PABPC1-207ENST00000518716 TRANK1O15050 2925 aa7.28□□□□□ -1.24
PABPC1-207ENST00000518716 PRR19A6NJB7 356 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 POM121CA8CG34 1229 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 ARVCFO00192 962 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 VWA5AO00534 786 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 DUSP11O75319 330 aaKnown RBP7.27□□□□□ -1.25
PABPC1-207ENST00000518716 FLOT1O75955 427 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 GNAI2P04899 355 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 ACRP10323 421 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 RARSP54136 660 aaKnown RBP7.27□□□□□ -1.25
PABPC1-207ENST00000518716 GJA9P57773 515 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 SEMA3FQ13275 785 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 CCDC158Q5M9N0 1113 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 TTC39AQ5SRH9 613 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 CCDC174Q6PII3 467 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 TMEM179Q6ZVK1 233 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 FAM9BQ8IZU0 186 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 TMEM199Q8N511 208 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 EAF2Q96CJ1 260 aaPredicted RBP7.27□□□□□ -1.25
PABPC1-207ENST00000518716 FGD4Q96M96 766 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 UBL7Q96S82 380 aaPredicted RBP7.27□□□□□ -1.25
PABPC1-207ENST00000518716 MMP19Q99542 508 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 KATNBL1Q9H079 304 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 NKX2-4Q9H2Z4 354 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 ANTXR1Q9H6X2 564 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 FBXO28Q9NVF7 368 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 MSRAQ9UJ68 235 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 NOP58Q9Y2X3 529 aaKnown RBP7.27□□□□□ -1.25
PABPC1-207ENST00000518716 GRIN2DO15399 1336 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 MROH7Q68CQ1 1323 aa7.27□□□□□ -1.25
PABPC1-207ENST00000518716 GBF1Q92538 1859 aa7.26□□□□□ -1.25
PABPC1-207ENST00000518716 SMIM22K7EJ46 135 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms