RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 LRRC55Q6ZSA7 311 aa10.71□□□□□ -0.7
ARFGEF1-203ENST00000518230 SV2BQ7L1I2 683 aa10.71□□□□□ -0.7
ARFGEF1-203ENST00000518230 ANKS1AQ92625 1134 aa10.71□□□□□ -0.7
ARFGEF1-203ENST00000518230 CELF4Q9BZC1 486 aaKnown RBP10.71□□□□□ -0.7
ARFGEF1-203ENST00000518230 TRIM31Q9BZY9 425 aa10.71□□□□□ -0.7
ARFGEF1-203ENST00000518230 BLOC1S4Q9NUP1 217 aa10.71□□□□□ -0.7
ARFGEF1-203ENST00000518230 ZNF652Q9Y2D9 606 aa10.71□□□□□ -0.7
ARFGEF1-203ENST00000518230 PCDHGC5Q9Y5F6 944 aa10.71□□□□□ -0.7
ARFGEF1-203ENST00000518230 COL4A1P02462 1669 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 SRRM3A6NNA2 597 aaPredicted RBP10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 MGRN1O60291 552 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 DRD4P21917 467 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 VPS72Q15906 364 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 SLC18A3Q16572 532 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 RUFY4Q6ZNE9 571 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 TEX11Q8IYF3 940 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 PNMA1Q8ND90 353 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 TCP11Q8WWU5 503 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 LRRC45Q96CN5 670 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 THOC1Q96FV9 657 aaKnown RBP10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 DPH5Q9H2P9 285 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 CUEDC2Q9H467 287 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 NOD2Q9HC29 1040 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 IL17RBQ9NRM6 502 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 TBC1D7Q9P0N9 293 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 L3MBTL1Q9Y468 752 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 ATP6V0A2Q9Y487 856 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 C5orf60A6NFR6 353 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 ATP6V1G2O95670 118 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 CLTAP09496 248 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 TFAP4Q01664 338 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 DHX9Q08211 1270 aaKnown RBP10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 BIRC3Q13489 604 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 LACTB2Q53H82 288 aaPredicted RBP10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 MSL1Q68DK7 614 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 SCFD2Q8WU76 684 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 STAMBPL1Q96FJ0 436 aa10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 DCP1AQ9NPI6 582 aaPredicted RBP10.7□□□□□ -0.7
ARFGEF1-203ENST00000518230 CICQ96RK0 1608 aaPredicted RBP10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 USP17L3A6NCW0 530 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 USP17L4A6NCW7 530 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 STXBP3O00186 592 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 TRAF5O00463 557 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 TTI1O43156 1089 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 PPIP5K2O43314 1243 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 ORC4O43929 436 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 KIF4AO95239 1232 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 CDC25CP30307 473 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 KLHL30Q0D2K2 578 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 GRB10Q13322 594 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 USP17L1Q7RTZ2 530 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 PNMA8AQ86V59 439 aaPredicted RBP10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 CCDC50Q8IVM0 306 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 NUDT12Q9BQG2 462 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 SH3GLB2Q9NR46 395 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 CEP72Q9P209 647 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 MAD2L2Q9UI95 211 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 PNMA2Q9UL42 364 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 JAG2Q9Y219 1238 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 TMCO5BA8MYB1 307 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 CTNND1O60716 968 aaKnown RBP10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 CAND2O75155 1236 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 TRIM37O94972 964 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 CLSTN1O94985 981 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 USP17L8P0C7I0 530 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 PRPHP41219 470 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 SEMA3FQ13275 785 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 CUL1Q13616 776 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 CRYMQ14894 314 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 SF3B3Q15393 1217 aaKnown RBP10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 NAIF1Q69YI7 327 aaPredicted RBP10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 BICDL1Q6ZP65 573 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 DYNLL2Q96FJ2 89 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 CALML4Q96GE6 196 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 AK8Q96MA6 479 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 MAGEF1Q9HAY2 307 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 ATP8A1Q9Y2Q0 1164 aa10.69□□□□□ -0.7
ARFGEF1-203ENST00000518230 ARAP2Q8WZ64 1704 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 CCT8L1PA6NM43 557 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 KRIT1O00522 736 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 RTN2O75298 545 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 PPP1R2P41236 205 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 MYO1EQ12965 1108 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 TBC1D9BQ66K14 1250 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 UNC13DQ70J99 1090 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 KCNK18Q7Z418 384 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 TBC1D1Q86TI0 1168 aaPredicted RBP10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 GUF1Q8N442 669 aaKnown RBP10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 METTL13Q8N6R0 699 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 MAGEC3Q8TD91 643 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 ZNF622Q969S3 477 aaKnown RBP eCLIP10.68□□□□□ -0.72e-6■■■□□ 15.7
ARFGEF1-203ENST00000518230 PNMA5Q96PV4 448 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 FGFBP2Q9BYJ0 223 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 MTFR1LQ9H019 292 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 ATP6V0A4Q9HBG4 840 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 VAT1LQ9HCJ6 419 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 BARHL2Q9NY43 387 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 GGT7Q9UJ14 662 aa10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 COL1A1P02452 1464 aaPredicted RBP10.68□□□□□ -0.7
ARFGEF1-203ENST00000518230 DLEC1Q9Y238 1755 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms