RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 ERMNQ8TAM6 284 aa11.87□□□□□ -0.51
PABPC1-203ENST00000517921 USP6NLQ92738 828 aa11.87□□□□□ -0.51
PABPC1-203ENST00000517921 ERCC4Q92889 916 aaPredicted RBP11.87□□□□□ -0.51
PABPC1-203ENST00000517921 PAGE5Q96GU1 130 aa11.87□□□□□ -0.51
PABPC1-203ENST00000517921 CDK5RAP3Q96JB5 506 aa11.87□□□□□ -0.51
PABPC1-203ENST00000517921 MTRQ99707 1265 aa11.87□□□□□ -0.51
PABPC1-203ENST00000517921 EIF2AK1Q9BQI3 630 aaKnown RBP11.87□□□□□ -0.51
PABPC1-203ENST00000517921 CUEDC2Q9H467 287 aa11.87□□□□□ -0.51
PABPC1-203ENST00000517921 MAGEF1Q9HAY2 307 aa11.87□□□□□ -0.51
PABPC1-203ENST00000517921 TBC1D22BQ9NU19 505 aa11.87□□□□□ -0.51
PABPC1-203ENST00000517921 BLOC1S4Q9NUP1 217 aa11.87□□□□□ -0.51
PABPC1-203ENST00000517921 STK17AQ9UEE5 414 aa11.87□□□□□ -0.51
PABPC1-203ENST00000517921 STK24Q9Y6E0 443 aa11.87□□□□□ -0.51
PABPC1-203ENST00000517921 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.86□□□□□ -0.51
PABPC1-203ENST00000517921 POTEFA5A3E0 1075 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 ARIH2O95376 493 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 CCNE2O96020 404 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 HOXC6P09630 235 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 SPATA31C1P0DKV0 1188 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 UBA1P22314 1058 aaKnown RBP11.86□□□□□ -0.51
PABPC1-203ENST00000517921 SP2Q02086 613 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 MAP2K5Q13163 448 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 EPHA7Q15375 998 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 KANK3Q6NY19 840 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 POTEGQ6S5H5 508 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 LRSAM1Q6UWE0 723 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 EEPD1Q7L9B9 569 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 MIER3Q7Z3K6 550 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 DPP9Q86TI2 863 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 NEK9Q8TD19 979 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 SOCS4Q8WXH5 440 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 MAML3Q96JK9 1138 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 SENP7Q9BQF6 1050 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 POLR3CQ9BUI4 534 aaPredicted RBP11.86□□□□□ -0.51
PABPC1-203ENST00000517921 KATNBL1Q9H079 304 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 NT5C3AQ9H0P0 336 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 KIAA1468Q9P260 1216 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 SYNGAP1Q96PV0 1343 aa11.86□□□□□ -0.51
PABPC1-203ENST00000517921 TNPO2O14787 897 aaKnown RBP11.85□□□□□ -0.51
PABPC1-203ENST00000517921 LACTBP83111 547 aaPredicted RBP11.85□□□□□ -0.51
PABPC1-203ENST00000517921 KRT76Q01546 638 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 CACNB1Q02641 598 aaPredicted RBP11.85□□□□□ -0.51
PABPC1-203ENST00000517921 CYP4A11Q02928 519 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 ZNF746Q6NUN9 644 aaPredicted RBP11.85□□□□□ -0.51
PABPC1-203ENST00000517921 CATSPER3Q86XQ3 398 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 MSL3Q8N5Y2 521 aaKnown RBP11.85□□□□□ -0.51
PABPC1-203ENST00000517921 RDM1Q8NG50 284 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 RAD54LQ92698 747 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 STAMQ92783 540 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 CCDC34Q96HJ3 373 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 DYDC2Q96IM9 177 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 HSD17B14Q9BPX1 270 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 ARHGAP39Q9C0H5 1083 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 BCAS3Q9H6U6 928 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 JPH1Q9HDC5 661 aaPredicted RBP11.85□□□□□ -0.51
PABPC1-203ENST00000517921 TUFT1Q9NNX1 390 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 VTA1Q9NP79 307 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 KBTBD4Q9NVX7 518 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.85□□□□□ -0.51
PABPC1-203ENST00000517921 SLC5A4Q9NY91 659 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 RGL1Q9NZL6 768 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 HOOK1Q9UJC3 728 aaKnown RBP11.85□□□□□ -0.51
PABPC1-203ENST00000517921 TUBE1Q9UJT0 475 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 GJD2Q9UKL4 321 aa11.85□□□□□ -0.51
PABPC1-203ENST00000517921 HTTP42858 3142 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 WDR64B1ANS9 1081 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 GTPBP6O43824 516 aaPredicted RBP11.84□□□□□ -0.51
PABPC1-203ENST00000517921 FARP2O94887 1054 aaPredicted RBP11.84□□□□□ -0.51
PABPC1-203ENST00000517921 SNAI1O95863 264 aaPredicted RBP11.84□□□□□ -0.51
PABPC1-203ENST00000517921 TGFB3P10600 412 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 MUTP22033 750 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 CASP1P29466 404 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 SFNP31947 248 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 RGS2P41220 211 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 AFMP43652 599 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 PSMC4P43686 418 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 JAK3P52333 1124 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 FCGRTP55899 365 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 CAP1Q01518 475 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 TYRO3Q06418 890 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 DPYDQ12882 1025 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 CTTNQ14247 550 aaKnown RBP11.84□□□□□ -0.51
PABPC1-203ENST00000517921 MCM6Q14566 821 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 CCDC62Q6P9F0 684 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 KCNV1Q6PIU1 500 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 GAS2L3Q86XJ1 694 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 LARP4BQ92615 738 aaKnown RBP11.84□□□□□ -0.51
PABPC1-203ENST00000517921 ERO1AQ96HE7 468 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 TRIM47Q96LD4 638 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 APBA2Q99767 749 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 LXNQ9BS40 222 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 TINF2Q9BSI4 451 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 WRAP73Q9P2S5 460 aaPredicted RBP11.84□□□□□ -0.51
PABPC1-203ENST00000517921 SLC9A2Q9UBY0 812 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 TCEAL9Q9UHQ7 104 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 DDX41Q9UJV9 622 aaKnown RBP11.84□□□□□ -0.51
PABPC1-203ENST00000517921 KIAA1024Q9UPX6 916 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 TELO2Q9Y4R8 837 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 PCDHA5Q9Y5H7 936 aa11.84□□□□□ -0.51
PABPC1-203ENST00000517921 TRIP12Q14669 1992 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms