RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 RSRP1Q9BUV0 290 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 NOC4LQ9BVI4 516 aaKnown RBP3.26□□□□□ -1.89
SKP1-204ENST00000517691 TMEM39BQ9GZU3 492 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 ABCB6Q9NP58 842 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 AATFQ9NY61 560 aaKnown RBP eCLIP3.26□□□□□ -1.89
SKP1-204ENST00000517691 ADAMTS1Q9UHI8 967 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 ATP8A1Q9Y2Q0 1164 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 DAGLAQ9Y4D2 1042 aa3.26□□□□□ -1.89
SKP1-204ENST00000517691 COL1A1P02452 1464 aaPredicted RBP3.25□□□□□ -1.89
SKP1-204ENST00000517691 MROH7-TTC4A0A0A0MT08 1334 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 AOX1Q06278 1338 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 TTC41PQ6P2S7 1318 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 WDR90Q96KV7 1748 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 CHD4Q14839 1912 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 GPR75-ASB3A0A0A6YYF3 556 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 ATXN7O15265 892 aaPredicted RBP3.25□□□□□ -1.89
SKP1-204ENST00000517691 SCGB1D2O95969 90 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 MYL1P05976 194 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 EDN3P14138 238 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 ACPPP15309 386 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 PDE6AP16499 860 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 NASPP49321 788 aaPredicted RBP3.25□□□□□ -1.89
SKP1-204ENST00000517691 PDE1AP54750 535 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 DYNLL1P63167 89 aaKnown RBP3.25□□□□□ -1.89
SKP1-204ENST00000517691 POU5F1BQ06416 359 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 PPP2R5AQ15172 486 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 LRRFIP1Q32MZ4 808 aaKnown RBP3.25□□□□□ -1.89
SKP1-204ENST00000517691 SUPT20HL1Q3ZLR7 823 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 ARSHQ5FYA8 562 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 CST9Q5W186 159 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 DDX42Q86XP3 938 aaKnown RBP eCLIP3.25□□□□□ -1.89
SKP1-204ENST00000517691 HOMER1Q86YM7 354 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 TEX11Q8IYF3 940 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 PDILTQ8N807 584 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 RASGRP4Q8TDF6 673 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 SH3RF3Q8TEJ3 882 aaPredicted RBP3.25□□□□□ -1.89
SKP1-204ENST00000517691 ZNF384Q8TF68 577 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 TGFBRAP1Q8WUH2 860 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 ZBED3Q96IU2 234 aaPredicted RBP3.25□□□□□ -1.89
SKP1-204ENST00000517691 BTBD6Q96KE9 485 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 FSD1Q9BTV5 496 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 EHD4Q9H223 541 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 PTPRHQ9HD43 1115 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 NDFIP2Q9NV92 336 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 PCDHGC4Q9Y5F7 938 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 SCINQ9Y6U3 715 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 PASKQ96RG2 1323 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 PITPNM2Q9BZ72 1349 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 ZNF532Q9HCE3 1301 aa3.25□□□□□ -1.89
SKP1-204ENST00000517691 TMEM238LA0A1B0GVL6 79 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 DBX1A6NMT0 343 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 UBE2Q2LH0YL09 131 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 RNF113AO15541 343 aaKnown RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 BNIP3LO60238 219 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 TRPA1O75762 1119 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 MAPTP10636 758 aaKnown RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 RGS3P49796 1198 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 GP2P55259 537 aaKnown RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 FCGRTP55899 365 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 HUNKP57058 714 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 NFIAQ12857 509 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 LBRQ14739 615 aaKnown RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 SLC4A8Q2Y0W8 1093 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 DEFB115Q30KQ5 88 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 EFHC2Q5JST6 749 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 NBPF12Q5TAG4 269 aaPredicted RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 SLCO4C1Q6ZQN7 724 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 MOB2Q70IA6 237 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 CENPQQ7L2Z9 268 aaPredicted RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 MIGA2Q7L4E1 593 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 ARMC9Q7Z3E5 817 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 ADGRA1Q86SQ6 560 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 CREBRFQ8IUR6 639 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 CCNJLQ8IV13 435 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 MAPKAPK5Q8IW41 473 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 ZFPM1Q8IX07 1006 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 SDR16C5Q8N3Y7 309 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 PAF1Q8N7H5 531 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 CEP120Q8N960 986 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 PI4K2BQ8TCG2 481 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 FAM151AQ8WW52 585 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 RELTQ969Z4 430 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 HOOK2Q96ED9 719 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 ABHD17AQ96GS6 310 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 SLC30A3Q99726 388 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 ZKSCAN3Q9BRR0 538 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 ZHX3Q9H4I2 956 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 LIN7BQ9HAP6 207 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 GBA2Q9HCG7 927 aaPredicted RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 PPP4R2Q9NY27 417 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 STAP2Q9UGK3 403 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 SAP30BPQ9UHR5 308 aaKnown RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 TPX2Q9ULW0 747 aaKnown RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 ANGEL1Q9UNK9 670 aaKnown RBP3.24□□□□□ -1.89
SKP1-204ENST00000517691 FZD1Q9UP38 647 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 PPP2R3BQ9Y5P8 575 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 CCDC88AQ3V6T2 1871 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 DYTNA2CJ06 578 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 DCDC2BA2VCK2 349 aa3.24□□□□□ -1.89
SKP1-204ENST00000517691 KHNYNO15037 678 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms