RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 TSG101Q99816 390 aa13.57□□□□□ -0.24
PCM1-203ENST00000517545 UBAP1LF5GYI3 381 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 TDP2O95551 362 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 MAGOHP61326 146 aaKnown RBP13.56□□□□□ -0.24
PCM1-203ENST00000517545 CALCRLQ16602 461 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 ECM1Q16610 540 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 PARP10Q53GL7 1025 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 USP17L2Q6R6M4 530 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 SCFD2Q8WU76 684 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 RAD54LQ92698 747 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 MAGOHBQ96A72 148 aaKnown RBP13.56□□□□□ -0.24
PCM1-203ENST00000517545 LUC7LQ9NQ29 371 aaKnown RBP13.56□□□□□ -0.24
PCM1-203ENST00000517545 TPX2Q9ULW0 747 aaKnown RBP13.56□□□□□ -0.24
PCM1-203ENST00000517545 SRRM3A6NNA2 597 aaPredicted RBP13.56□□□□□ -0.24
PCM1-203ENST00000517545 DAPK3O43293 454 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 KIF4AO95239 1232 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 ELF1P32519 619 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 PPP2R2AP63151 447 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 FKBP3Q00688 224 aaKnown RBP13.56□□□□□ -0.24
PCM1-203ENST00000517545 DRP2Q13474 957 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 E2F5Q15329 346 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 SNCBQ16143 134 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 ZCWPW2Q504Y3 356 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 FBXO33Q7Z6M2 555 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 MYOCDQ8IZQ8 938 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 SYN2Q92777 582 aaPredicted RBP13.56□□□□□ -0.24
PCM1-203ENST00000517545 MTMR9Q96QG7 549 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 AMACRQ9UHK6 382 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 ODF2LQ9ULJ1 636 aa13.56□□□□□ -0.24
PCM1-203ENST00000517545 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.56□□□□□ -0.24
PCM1-203ENST00000517545 ACTN1P12814 892 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 CRKLP46109 303 aaKnown RBP13.55□□□□□ -0.24
PCM1-203ENST00000517545 SCTRP47872 440 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 ERFEQ4G0M1 354 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 WLSQ5T9L3 541 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 EP400NLQ6ZTU2 488 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 MDM1Q8TC05 714 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 SNX29Q8TEQ0 813 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 LRRC45Q96CN5 670 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 ACTR5Q9H9F9 607 aaPredicted RBP13.55□□□□□ -0.24
PCM1-203ENST00000517545 C6orf50Q9HD87 102 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 STK17AQ9UEE5 414 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 C21orf2O43822 256 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 PTK2Q05397 1052 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 COASYQ13057 564 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 CUL1Q13616 776 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 UIMC1Q96RL1 719 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 EDIL3O43854 480 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 USP11P51784 963 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 CACNB1Q02641 598 aaPredicted RBP13.55□□□□□ -0.24
PCM1-203ENST00000517545 ASIC2Q16515 512 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 CACNA2D3Q8IZS8 1091 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 METTL13Q8N6R0 699 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 SGSM3Q96HU1 749 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 CELF4Q9BZC1 486 aaKnown RBP13.55□□□□□ -0.24
PCM1-203ENST00000517545 NUCKS1Q9H1E3 243 aaKnown RBP13.55□□□□□ -0.24
PCM1-203ENST00000517545 CCDC87Q9NVE4 849 aa13.55□□□□□ -0.24
PCM1-203ENST00000517545 BSDC1Q9NW68 430 aaPredicted RBP13.55□□□□□ -0.24
PCM1-203ENST00000517545 NOC2LQ9Y3T9 749 aaKnown RBP13.55□□□□□ -0.24
PCM1-203ENST00000517545 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.55□□□□□ -0.24
PCM1-203ENST00000517545 ECM2O94769 699 aaPredicted RBP13.54□□□□□ -0.24
PCM1-203ENST00000517545 NF2P35240 595 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 ZNF571Q7Z3V5 609 aaPredicted RBP13.54□□□□□ -0.24
PCM1-203ENST00000517545 PIGSQ96S52 555 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 RIC8AQ9NPQ8 531 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 KIAA1551Q9HCM1 1747 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 BIRC3Q13489 604 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 REXO1Q8N1G1 1221 aaKnown RBP13.54□□□□□ -0.24
PCM1-203ENST00000517545 SH3RF3Q8TEJ3 882 aaPredicted RBP13.54□□□□□ -0.24
PCM1-203ENST00000517545 TATDN2Q93075 761 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 UBA5Q9GZZ9 404 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 TTI1O43156 1089 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 GNA11P29992 359 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 KRT71Q3SY84 523 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 SOGA3Q5TF21 947 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 RUFY4Q6ZNE9 571 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 RPAINQ86UA6 219 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 TXNRD3Q86VQ6 643 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 TRIM59Q8IWR1 403 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 LRRC57Q8N9N7 239 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 DNAJC19Q96DA6 116 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 GANQ9H2C0 597 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 DPH5Q9H2P9 285 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 AIPL1Q9NZN9 384 aa13.54□□□□□ -0.24
PCM1-203ENST00000517545 SAP30BPQ9UHR5 308 aaKnown RBP13.54□□□□□ -0.24
PCM1-203ENST00000517545 LAMB1P07942 1786 aa13.53□□□□□ -0.24
PCM1-203ENST00000517545 FAM170AA1A519 330 aa13.53□□□□□ -0.24
PCM1-203ENST00000517545 C5orf60A6NFR6 353 aa13.53□□□□□ -0.24
PCM1-203ENST00000517545 TMCO5BA8MYB1 307 aa13.53□□□□□ -0.24
PCM1-203ENST00000517545 KRIT1O00522 736 aa13.53□□□□□ -0.24
PCM1-203ENST00000517545 ZBTB48P10074 688 aaPredicted RBP13.53□□□□□ -0.24
PCM1-203ENST00000517545 TMC3Q7Z5M5 1100 aa13.53□□□□□ -0.24
PCM1-203ENST00000517545 ZNF444Q8N0Y2 327 aaPredicted RBP13.53□□□□□ -0.24
PCM1-203ENST00000517545 PROM2Q8N271 834 aa13.53□□□□□ -0.24
PCM1-203ENST00000517545 ACTRT1Q8TDG2 376 aa13.53□□□□□ -0.24
PCM1-203ENST00000517545 TRIM31Q9BZY9 425 aa13.53□□□□□ -0.24
PCM1-203ENST00000517545 F8W031 263 aaPredicted RBP13.53□□□□□ -0.24
PCM1-203ENST00000517545 PGRMC1O00264 195 aaKnown RBP13.53□□□□□ -0.24
PCM1-203ENST00000517545 DHX9Q08211 1270 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms