RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CDK8P49336 464 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 PFKFB3Q16875 520 aaPredicted RBP11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 RNF34Q969K3 372 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 OSBPL9Q96SU4 736 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 NDST4Q9H3R1 872 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 PNPLA7Q6ZV29 1317 aa11.82□□□□□ -0.52
PCDHGA1-202ENST00000517417 MEGF6O75095 1541 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 A0A087X0B3 334 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 FOSP01100 380 aaPredicted RBP11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 MMP10P09238 476 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 SNAP25P60880 206 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 GRAPQ13588 217 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 BRDTQ58F21 947 aaPredicted RBP11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 NAA35Q5VZE5 725 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 CLEC4GQ6UXB4 293 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 ADSSL1Q8N142 457 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 GRAPLQ8TC17 118 aaPredicted RBP11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 AMFRQ9UKV5 643 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 LAD1O00515 517 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 LIG4P49917 911 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 SLC20A2Q08357 652 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 PPP2R5DQ14738 602 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 KRT71Q3SY84 523 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 ARHGAP27Q6ZUM4 889 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 SYCE1Q8N0S2 351 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 SREK1Q8WXA9 508 aaKnown RBP11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 CYP19A1P11511 503 aaPredicted RBP11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 NR1D1P20393 614 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 LLGL1Q15334 1064 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 TAF12Q16514 161 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 EXOC3L4Q17RC7 722 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 TEKT3Q9BXF9 490 aa11.81□□□□□ -0.52
PCDHGA1-202ENST00000517417 LRRIQ4A6NIV6 560 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 H2AFZP0C0S5 128 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 H2AFVQ71UI9 128 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 SRBD1Q8N5C6 995 aaKnown RBP11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 SPATA4Q8NEY3 305 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 SH3RF3Q8TEJ3 882 aaPredicted RBP11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 IWS1Q96ST2 819 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 FAM196BA6NMK8 535 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 CLIC2O15247 247 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 RPS6KA4O75676 772 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 BARGINQ6ZT62 677 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 AK8Q96MA6 479 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 SNX12Q9UMY4 172 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 TRPC6Q9Y210 931 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 ESYT3A0FGR9 886 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 KRIT1O00522 736 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 KLK7P49862 253 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 LRRC53A6NM62 1247 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 DAPK3O43293 454 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 BMP3P12645 472 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 HOXA13P31271 388 aaPredicted RBP11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 DCAF15Q66K64 600 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 NCAPG2Q86XI2 1143 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 CDAN1Q8IWY9 1227 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 UHMK1Q8TAS1 419 aaKnown RBP11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 ZNF526Q8TF50 670 aaPredicted RBP11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 BRIP1Q9BX63 1249 aa11.8□□□□□ -0.52
PCDHGA1-202ENST00000517417 IRAK1P51617 712 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 MTMR3Q13615 1198 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 SMARCAL1Q9NZC9 954 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 SWAP70Q9UH65 585 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 SRGNP10124 158 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 FKBP3Q00688 224 aaKnown RBP11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 GADL1Q6ZQY3 521 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 SMC6Q96SB8 1091 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 ZNF577Q9BSK1 485 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 DPH5Q9H2P9 285 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 METTL14Q9HCE5 456 aaKnown RBP11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 SSX2IPQ9Y2D8 614 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 PABPN1LA6NDY0 278 aaKnown RBP11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 PRPF6O94906 941 aaKnown RBP11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 EARS2Q5JPH6 523 aaKnown RBP11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 SLC27A3Q5K4L6 730 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 TBC1D9BQ66K14 1250 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 POMGNT1Q8WZA1 660 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 AS3MTQ9HBK9 375 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 PI4KBQ9UBF8 816 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 EIF3HO15372 352 aaKnown RBP eCLIP11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 HERVK_113P62684 666 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 GFPT1Q06210 699 aaPredicted RBP11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 ANKRD40Q6AI12 368 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 APBB1IPQ7Z5R6 666 aaPredicted RBP11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 DGKHQ86XP1 1220 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 MCF2L2Q86YR7 1114 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 CACNA2D3Q8IZS8 1091 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 SH2D3CQ8N5H7 860 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 POLD4Q9HCU8 107 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 ANKFY1Q9P2R3 1169 aa11.79□□□□□ -0.52
PCDHGA1-202ENST00000517417 HNRNPDLO14979 420 aaKnown RBP11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 FOXP2O15409 715 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 ABL1P00519 1130 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 FCER1AP12319 257 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 KCNB1Q14721 858 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 SETDB1Q15047 1291 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 JPH2Q9BR39 696 aaPredicted RBP11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 RNF14Q9UBS8 474 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 LRRC37A3O60309 1634 aa11.78□□□□□ -0.52
PCDHGA1-202ENST00000517417 IGBP1P78318 339 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms