RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 NKRFO15226 690 aaKnown RBP eCLIP6.08□□□□□ -1.44
LINC00534-201ENST00000517400 MAFKO60675 156 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 TADA3O75528 432 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 EYA4O95677 639 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 AMY2AP04746 511 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 CYBBP04839 570 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 DBHP09172 617 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 COL6A2P12110 1019 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 AMY2BP19961 511 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 SCNN1BP51168 640 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 GALK1P51570 392 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 ANAPC15P60006 121 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 FYB2Q5VWT5 728 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 STEAP3Q658P3 488 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 STRA8Q7Z7C7 330 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 NBPF11Q86T75 865 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 DCP2Q8IU60 420 aaKnown RBP6.08□□□□□ -1.44
LINC00534-201ENST00000517400 C2orf69Q8N8R5 385 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 CHST14Q8NCH0 376 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 OR2W6PQ8NHA6 318 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 UHMK1Q8TAS1 419 aaKnown RBP6.08□□□□□ -1.44
LINC00534-201ENST00000517400 PIP4K2CQ8TBX8 421 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 SEC14L1Q92503 715 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 SMOC1Q9H4F8 434 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 NUDT5Q9UKK9 219 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 ATP8A1Q9Y2Q0 1164 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 NUP153P49790 1475 aaKnown RBP6.08□□□□□ -1.44
LINC00534-201ENST00000517400 PRXQ9BXM0 1461 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 SCAPERQ9BY12 1400 aa6.08□□□□□ -1.44
LINC00534-201ENST00000517400 MPOP05164 745 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 CPEP16870 476 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 JAM2P57087 298 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 DSG1Q02413 1049 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 NR1I3Q14994 352 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 HHIPL2Q6UWX4 724 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 ARHGAP36Q6ZRI8 547 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 CISD2Q8N5K1 135 aaKnown RBP6.07□□□□□ -1.44
LINC00534-201ENST00000517400 SH3RF2Q8TEC5 729 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 PEX11GQ96HA9 241 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 INTS4Q96HW7 963 aaKnown RBP6.07□□□□□ -1.44
LINC00534-201ENST00000517400 FAM126AQ9BYI3 521 aaPredicted RBP6.07□□□□□ -1.44
LINC00534-201ENST00000517400 PDGFDQ9GZP0 370 aaPredicted RBP6.07□□□□□ -1.44
LINC00534-201ENST00000517400 AP5M1Q9H0R1 490 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 SLC6A17Q9H1V8 727 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 SMURF1Q9HCE7 757 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 MCM8Q9UJA3 840 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 DSEQ9UL01 958 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 ZNF652Q9Y2D9 606 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 ZKSCAN5Q9Y2L8 839 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 NUB1Q9Y5A7 615 aa6.07□□□□□ -1.44
LINC00534-201ENST00000517400 CDK13Q14004 1512 aaKnown RBP6.07□□□□□ -1.44
LINC00534-201ENST00000517400 TTC37Q6PGP7 1564 aa6.06□□□□□ -1.44
LINC00534-201ENST00000517400 FER1L4A9Z1Z3 1794 aa6.06□□□□□ -1.44
LINC00534-201ENST00000517400 EFCAB5A4FU69 1503 aa6.06□□□□□ -1.44
LINC00534-201ENST00000517400 PPM1GO15355 546 aaPredicted RBP6.06□□□□□ -1.44
LINC00534-201ENST00000517400 SGSM2O43147 1006 aa6.06□□□□□ -1.44
LINC00534-201ENST00000517400 BRINP1O60477 761 aa6.06□□□□□ -1.44
LINC00534-201ENST00000517400 ZBTB7AO95365 584 aa6.06□□□□□ -1.44
LINC00534-201ENST00000517400 GLI1P08151 1106 aa6.06□□□□□ -1.44
LINC00534-201ENST00000517400 BPIP17213 487 aa6.06□□□□□ -1.44
LINC00534-201ENST00000517400 STRN3Q13033 797 aa6.06□□□□□ -1.44
LINC00534-201ENST00000517400 EFCAB2Q5VUJ9 269 aa6.06□□□□□ -1.44
LINC00534-201ENST00000517400 DDX42Q86XP3 938 aaKnown RBP eCLIP6.06□□□□□ -1.44
LINC00534-201ENST00000517400 RPUSD2Q8IZ73 545 aaKnown RBP6.06□□□□□ -1.44
LINC00534-201ENST00000517400 NLGN4XQ8N0W4 816 aa6.06□□□□□ -1.44
LINC00534-201ENST00000517400 PHOSPHO1Q8TCT1 267 aa6.06□□□□□ -1.44
LINC00534-201ENST00000517400 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.06□□□□□ -1.44
LINC00534-201ENST00000517400 UHRF1BP1Q6BDS2 1440 aa6.06□□□□□ -1.44
LINC00534-201ENST00000517400 CFAP74Q9C0B2 1584 aa6.06□□□□□ -1.44
LINC00534-201ENST00000517400 SLC12A8A0AV02 714 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 ZC3H12DA2A288 527 aaKnown RBP6.05□□□□□ -1.44
LINC00534-201ENST00000517400 PTPDC1A2A3K4 754 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 ZNF891A8MT65 544 aaPredicted RBP6.05□□□□□ -1.44
LINC00534-201ENST00000517400 MAN2B1O00754 1011 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 ZEB2O60315 1214 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 GAS7O60861 476 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 YBX3P16989 372 aaKnown RBP eCLIP6.05□□□□□ -1.44
LINC00534-201ENST00000517400 KRT15P19012 456 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 CDK11BP21127 795 aaKnown RBP6.05□□□□□ -1.44
LINC00534-201ENST00000517400 EPHA5P54756 1037 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 SLC9A5Q14940 896 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 SART3Q15020 963 aaKnown RBP6.05□□□□□ -1.44
LINC00534-201ENST00000517400 KCNMB1Q16558 191 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 ADGRF1Q5T601 910 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 ZSWIM9Q86XI8 627 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 IRF2BP1Q8IU81 584 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 NXPE1Q8N323 547 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 SMC1BQ8NDV3 1235 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 TTC1Q99614 292 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 BOCQ9BWV1 1114 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 IFT22Q9H7X7 185 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 SRPK3Q9UPE1 567 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 SIT1Q9Y3P8 196 aa6.05□□□□□ -1.44
LINC00534-201ENST00000517400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.04□□□□□ -1.441e-6■■■□□ 14.8
LINC00534-201ENST00000517400 HECW1Q76N89 1606 aa6.04□□□□□ -1.44
LINC00534-201ENST00000517400 OR14I1A6ND48 311 aa6.04□□□□□ -1.44
LINC00534-201ENST00000517400 F8W031 263 aaPredicted RBP6.04□□□□□ -1.44
LINC00534-201ENST00000517400 ABLIM1O14639 778 aa6.04□□□□□ -1.44
LINC00534-201ENST00000517400 CLASP2O75122 1294 aaKnown RBP6.04□□□□□ -1.44
LINC00534-201ENST00000517400 HMGB1P09429 215 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms