RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 ANKRD35Q8N283 1001 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 FBXL16Q8N461 479 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SRBD1Q8N5C6 995 aaKnown RBP6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TTC16Q8NEE8 873 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SHCBP1Q8NEM2 672 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 REPS2Q8NFH8 660 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RAET1EQ8TD07 263 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SREK1Q8WXA9 508 aaKnown RBP6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 DDX11Q96FC9 970 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ZNF274Q96GC6 653 aaPredicted RBP6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TRIM47Q96LD4 638 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TRERF1Q96PN7 1200 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PIGSQ96S52 555 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 AGXT2Q9BYV1 514 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GRIP2Q9C0E4 1043 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ALDH8A1Q9H2A2 487 aaPredicted RBP6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SLKQ9H2G2 1235 aaPredicted RBP6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RIOX1Q9H6W3 641 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 JMJD4Q9H9V9 463 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 HOMER2Q9NSB8 354 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RBM28Q9NW13 759 aaKnown RBP6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 VTI1BQ9UEU0 232 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PNMA2Q9UL42 364 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ZNF214Q9UL59 606 aaPredicted RBP6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TPCN1Q9ULQ1 816 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GABRQQ9UN88 632 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RIPK3Q9Y572 518 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 V9GY48 417 aaPredicted RBP6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ZNF536O15090 1300 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MYH4Q9Y623 1939 aa6.7□□□□□ -1.34
SCARNA6.1-201ENST00000516989 LAMA4Q16363 1823 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 hCG_1642624A0A1W2PR95 340 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TTC24A2A3L6 582 aaPredicted RBP6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CPLX1O14810 134 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ATP2A1O14983 1001 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ZBTB5O15062 677 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CYTH3O43739 400 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 STRNO43815 780 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PPFIA3O75145 1194 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 FCER1AP12319 257 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TAL1P17542 331 aaPredicted RBP6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SMARCA1P28370 1054 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CDC27P30260 824 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 COPB2P35606 906 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 FLT3LGP49771 235 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RCAN1P53805 252 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 EVCP57679 992 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 AKAP17AQ02040 695 aaKnown RBP6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PRKCZQ05513 592 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 KCTD2Q14681 263 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TKFCQ3LXA3 575 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GNASQ5JWF2 1037 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CPLX2Q6PUV4 134 aaKnown RBP6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TMTC3Q6ZXV5 915 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 FBXO11Q86XK2 927 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CHST13Q8NET6 341 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RRP36Q96EU6 259 aaKnown RBP6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 IL17RAQ96F46 866 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TBC1D32Q96NH3 1257 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MMP19Q99542 508 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 KIF2CQ99661 725 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 AMNQ9BXJ7 453 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 NCOA5Q9HCD5 579 aaKnown RBP6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RNF146Q9NTX7 359 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SLC5A4Q9NY91 659 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SEC63Q9UGP8 760 aaKnown RBP6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SRRDQ9UH36 339 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 FBXO40Q9UH90 709 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PCDHA1Q9Y5I3 950 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PTPRFP10586 1907 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 CASP8AP2Q9UKL3 1982 aa6.69□□□□□ -1.34
SCARNA6.1-201ENST00000516989 THSD7BQ9C0I4 1608 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 LOC285556D6RIA3 1793 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PTPDC1A2A3K4 754 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SLC15A5A6NIM6 579 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PFKFB2O60825 505 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MICAL2O94851 1124 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PGK2P07205 417 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TIMP2P16035 220 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 RGS2P41220 211 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PLA2G4AP47712 749 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PRMT2P55345 433 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 TRAF1Q13077 416 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ORC1Q13415 861 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 BAATQ14032 418 aaPredicted RBP6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PKN2Q16513 984 aaKnown RBP6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ME3Q16798 604 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SLC35G1Q2M3R5 365 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 NSMFQ6X4W1 530 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SPNS2Q8IVW8 549 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 NECAB1Q8N987 351 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MTMR8Q96EF0 704 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 SPZ1Q9BXG8 430 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 ACAD9Q9H845 621 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 FAM13BQ9NYF5 915 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 GJD2Q9UKL4 321 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 LIMCH1Q9UPQ0 1083 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PTPN22Q9Y2R2 807 aa6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 MRPL11Q9Y3B7 192 aaKnown RBP6.68□□□□□ -1.34
SCARNA6.1-201ENST00000516989 PTCH2Q9Y6C5 1203 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms