RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TRIP6Q15654 476 aaKnown RBP4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 GRIK5Q16478 980 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 NAALADL2Q58DX5 795 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 FAM47CQ5HY64 1035 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 TMEM63BQ5T3F8 832 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 KIAA1614Q5VZ46 1190 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 MAMSTRQ6ZN01 415 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 TOGARAM2Q6ZUX3 1019 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 COPS6Q7L5N1 327 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 DDX53Q86TM3 631 aaKnown RBP4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 FEZF2Q8TBJ5 459 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 PPP1R13LQ8WUF5 828 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 ZDHHC15Q96MV8 337 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 KIF2CQ99661 725 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 IFIH1Q9BYX4 1025 aaKnown RBP4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 EPN3Q9H201 632 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 AS3MTQ9HBK9 375 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 ZSWIM6Q9HCJ5 1215 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 MEGF8Q7Z7M0 2845 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 NBASA2RRP1 2371 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 ADGRA3Q8IWK6 1321 aa4.13□□□□□ -1.75
SCARNA13-201ENST00000516672 A0A087X0B3 334 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 PATE3B3GLJ2 98 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 PARNO95453 639 aaKnown RBP4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 SNAI1O95863 264 aaPredicted RBP4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 ITGB6P18564 788 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 MAPK8P45983 427 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 KCNJ4P48050 445 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 CXCL12P48061 93 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 FXR2P51116 673 aaKnown RBP eCLIP4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 EPHA5P54756 1037 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 HDLBPQ00341 1268 aaKnown RBP4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 RUNX1T1Q06455 604 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 HNRNPDQ14103 355 aaKnown RBP4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 FSCN1Q16658 493 aaKnown RBP4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 CCDC144BQ3MJ40 725 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 SLC44A4Q53GD3 710 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 HHIPL2Q6UWX4 724 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 ZNF804AQ7Z570 1209 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 SLCO6A1Q86UG4 719 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 ABRAQ8N0Z2 381 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 CCDC155Q8N6L0 562 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 CHST13Q8NET6 341 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 SNIP1Q8TAD8 396 aaKnown RBP4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 L3MBTL2Q969R5 705 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 CHRDQ9H2X0 955 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 DONSONQ9NYP3 566 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 FAM198AQ9UFP1 575 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 SEPT9Q9UHD8 586 aaPredicted RBP4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 APOBEC2Q9Y235 224 aaKnown RBP4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 NOD1Q9Y239 953 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 ASTN1O14525 1302 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 PCNX2A6NKB5 2137 aa4.12□□□□□ -1.75
SCARNA13-201ENST00000516672 BCLAF3A2AJT9 711 aaKnown RBP4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 FAM149AA5PLN7 773 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 GNAT3A8MTJ3 354 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 PLK4O00444 970 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 MEFVO15553 781 aaPredicted RBP4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 ZEB2O60315 1214 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 N4BP1O75113 896 aaKnown RBP4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 RPP40O75818 363 aaKnown RBP4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 HNRNPA1P09651 372 aaKnown RBP eCLIP4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 ALDH7A1P49419 539 aaKnown RBP4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 ERVFC1P60507 584 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 GPC5P78333 572 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 IRX4P78413 519 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 ACVR2BQ13705 512 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 NCAPHQ15003 741 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 SKOR2Q2VWA4 1001 aaPredicted RBP4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 ZNF792Q3KQV3 632 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 PDE12Q6L8Q7 609 aaKnown RBP4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 RSPO2Q6UXX9 243 aaPredicted RBP4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 LRP10Q7Z4F1 713 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 WDR5BQ86VZ2 330 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 C12orf40Q86WS4 652 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 NCAPG2Q86XI2 1143 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 DBF4BQ8NFT6 615 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 CAGE1Q8TC20 777 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 GAB3Q8WWW8 586 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 MARVELD3Q96A59 401 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 CAMK1GQ96NX5 476 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 NELL2Q99435 816 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 THUMPD2Q9BTF0 503 aaKnown RBP4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 CARD14Q9BXL6 1004 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 GSX1Q9H4S2 264 aaPredicted RBP4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 GPRC5CQ9NQ84 441 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 SDK1Q7Z5N4 2213 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 SIPA1L1O43166 1804 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 ROCK2O75116 1388 aaKnown RBP4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 COL1A2P08123 1366 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 TLN2Q9Y4G6 2542 aa4.11□□□□□ -1.75
SCARNA13-201ENST00000516672 SPEF2Q9C093 1822 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 PLXNA4Q9HCM2 1894 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 C19orf81C9J6K1 198 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 E9PAM4 449 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 K7ESF4 209 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 SNAP23O00161 211 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 HAX1O00165 279 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 CCDC192P0DO97 292 aa4.1□□□□□ -1.75
SCARNA13-201ENST00000516672 FCER1AP12319 257 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms