RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 RPRD2Q5VT52 1461 aaKnown RBP-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 LMTK3Q96Q04 1460 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ASPMQ8IZT6 3477 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RALGAPA1Q6GYQ0 2036 aa-0.55□□□□□ -2.5
SCARNA20.2-201ENST00000516052 COL4A5P29400 1685 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MIA3Q5JRA6 1907 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DENND4AQ7Z401 1863 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SLX4Q8IY92 1834 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DYSFO75923 2080 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 IGLV3-10A0A075B6K4 115 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MYOCOSA0A1B0GUC4 107 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SLC35F4A4IF30 521 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 C5orf49A4QMS7 147 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TMEM8BA6NDV4 472 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PRR23AA6NEV1 266 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CCDC85CA6NKD9 419 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 FAM155AB1AL88 458 aaPredicted RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 H3BMH7 237 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SUPT5HO00267 1087 aaKnown RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RFXAPO00287 272 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SIVA1O15304 175 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PPM1GO15355 546 aaPredicted RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SLC16A3O15427 465 aaKnown RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZSCAN12O43309 604 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SPRY3O43610 288 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TRAK2O60296 914 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PPP1R11O60927 126 aaPredicted RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ULK1O75385 1050 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TCEA3O75764 348 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PHF14O94880 888 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 LUC7L3O95232 432 aaKnown RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 FSTL3O95633 263 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 IGKV3-15P01624 115 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 WNT1P04628 370 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ALPLP05186 524 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 THBDP07204 575 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CELA2AP08217 269 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 KRT16P08779 473 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TGFB3P10600 412 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 HAPLN1P10915 354 aaPredicted RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PNMTP11086 282 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SRFP11831 508 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 FCGR2AP12318 317 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MT1GP13640 62 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 HRES1P13985 223 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SELLP14151 372 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 VAV1P15498 845 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PAMP19021 973 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CELP19835 753 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ATP2B1P20020 1258 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TRHP20396 242 aaPredicted RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 VARSP26640 1264 aaKnown RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MST1P26927 711 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 HNRNPH3P31942 346 aaKnown RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RNASE4P34096 147 aaKnown RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PCGF2P35227 344 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TIMP3P35625 211 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ETV4P43268 484 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MAPK8P45983 427 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 KCNC1P48547 511 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PTH2RP49190 550 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 CTCFP49711 727 aaPredicted RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 HTR6P50406 440 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DNM2P50570 870 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZNF133P52736 654 aaPredicted RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 UCNP55089 124 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 JAM2P57087 298 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 LOXL3P58215 753 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ERVK11-1P61568 191 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 YBX1P67809 324 aaKnown RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DLG4P78352 724 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MT1HP80294 61 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 VLDLRP98155 873 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TAGLNQ01995 201 aaKnown RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 DSC2Q02487 901 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SRSF4Q08170 494 aaKnown RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PDE4DQ08499 809 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PPIDQ08752 370 aaKnown RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 GRSF1Q12849 480 aaKnown RBP eCLIP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 SRSF5Q13243 272 aaKnown RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 KLF1Q13351 362 aaPredicted RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 MOGSQ13724 837 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 KLF9Q13886 244 aaPredicted RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 HNRNPDQ14103 355 aaKnown RBP-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ETFDHQ16134 617 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 PTPRNQ16849 979 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 NKPD1Q17RQ9 610 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 GEN1Q17RS7 908 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 VWC2Q2TAL6 325 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 FAM214AQ32MH5 1076 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TBC1D25Q3MII6 688 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 NRN1LQ496H8 165 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 Q4G0T1 1027 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TNNI3KQ59H18 835 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 TRIM61Q5EBN2 209 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZNF618Q5T7W0 954 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ALS2CLQ60I27 953 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 WBP2NLQ6ICG8 309 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 RGMBQ6NW40 437 aa-0.56□□□□□ -2.5
SCARNA20.2-201ENST00000516052 ZNF774Q6NX45 483 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms