RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 TIGD2Q4W5G0 525 aa0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 NAALADL2Q58DX5 795 aa0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 PLEKHG4Q58EX7 1191 aa0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 NOM1Q5C9Z4 860 aaKnown RBP0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 SLC9A4Q6AI14 798 aa0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 PP632Q6XCG6 107 aa0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 CMTR2Q8IYT2 770 aaKnown RBP0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 GPR135Q8IZ08 494 aa0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 FNBP4Q8N3X1 1017 aaPredicted RBP0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 LCORLQ8N3X6 602 aa0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 LINC00476Q8WZB0 136 aa0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 DPF1Q92782 380 aa0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 CAVIN3Q969G5 261 aa0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 GAL3ST3Q96A11 431 aa0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 TMEM209Q96SK2 561 aa0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 NGRNQ9NPE2 291 aaKnown RBP0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 SAMM50Q9Y512 469 aa0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 USP24Q9UPU5 2620 aa0.35□□□□□ -2.35
SCARNA21.1-201ENST00000515996 GFRA2O00451 464 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 ENC1O14682 589 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 LPXNO60711 386 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 CLASP2O75122 1294 aaKnown RBP0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 GADD45BO75293 160 aaPredicted RBP0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 PROP1O75360 226 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 SNRPB2P08579 225 aaKnown RBP0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 GSTM1P09488 218 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 USP5P45974 858 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 LURAP1LQ8IV03 231 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 ANKRD35Q8N283 1001 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 LILRA3Q8N6C8 439 aaPredicted RBP0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 VGLL2Q8N8G2 317 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 RETREG2Q8NC44 543 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 FAM13CQ8NE31 585 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 WFIKKN2Q8TEU8 576 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 CFHR4Q92496 578 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 COQ10AQ96MF6 247 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 WDR11Q9BZH6 1224 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 SLC24A3Q9HC58 644 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 MSL2Q9HCI7 577 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 CHST7Q9NS84 486 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 MDN1Q9NU22 5596 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 MUC2Q02817 5179 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 UBR4Q5T4S7 5183 aa0.34□□□□□ -2.36
SCARNA21.1-201ENST00000515996 OTOGLQ3ZCN5 2332 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 KMT2DO14686 5537 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 MANSC4A6NHS7 340 aaPredicted RBP0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 MYMKA6NI61 221 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 ADAM10O14672 748 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 FGF10O15520 208 aaPredicted RBP0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 KNG1P01042 644 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 NTRK1P04629 796 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 PRR35P0CG20 571 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 ITPKBP27987 946 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 HNRNPA3P51991 378 aaKnown RBP0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 YARSP54577 528 aaKnown RBP0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 SEMA3AQ14563 771 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 PHF19Q5T6S3 580 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 PTF1AQ7RTS3 328 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 DCP2Q8IU60 420 aaKnown RBP0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 TAB3Q8N5C8 712 aaPredicted RBP0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 WBP2Q969T9 261 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 HMCESQ96FZ2 354 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 YIPF4Q9BSR8 244 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 CARD11Q9BXL7 1154 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 GPR87Q9BY21 358 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 ELOVL5Q9NYP7 299 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 ANKFY1Q9P2R3 1169 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 PUF60Q9UHX1 559 aaKnown RBP0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 ADAM30Q9UKF2 790 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 WASF3Q9UPY6 502 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 AKAP2Q9Y2D5 859 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 BTBD3Q9Y2F9 522 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 SH3BP1Q9Y3L3 701 aa0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 MAFBQ9Y5Q3 323 aaPredicted RBP0.33□□□□□ -2.36
SCARNA21.1-201ENST00000515996 KIF26BQ2KJY2 2108 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 FBN3Q75N90 2809 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 TNFRSF10CO14798 259 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 PPEF2O14830 753 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 MGST3O14880 152 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 SGSM2O43147 1006 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 CKMP06732 381 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 HKR1P10072 659 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 CKBP12277 381 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 XRCC5P13010 732 aaKnown RBP0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 MPSTP25325 297 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 RRADP55042 308 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 RNF4P78317 190 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 PDE4BQ07343 736 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 LAMB3Q13751 1172 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 SMAD2Q15796 467 aaKnown RBP0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 TBR1Q16650 682 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 TMC5Q6UXY8 1006 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 CUZD1Q86UP6 607 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 GJD3Q8N144 294 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 ZBTB38Q8NAP3 1195 aaPredicted RBP0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 DENND1AQ8TEH3 1009 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 MTA3Q9BTC8 594 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 SLC12A9Q9BXP2 914 aa0.32□□□□□ -2.36
SCARNA21.1-201ENST00000515996 AP5M1Q9H0R1 490 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms