RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 STXBP3O00186 592 aa11.15□□□□□ -0.62
SMG7-215ENST00000515829 TMED8Q6PL24 325 aaPredicted RBP11.15□□□□□ -0.62
SMG7-215ENST00000515829 SLFN12Q8IYM2 578 aa11.15□□□□□ -0.62
SMG7-215ENST00000515829 VGLL2Q8N8G2 317 aa11.15□□□□□ -0.62
SMG7-215ENST00000515829 MAGOHBQ96A72 148 aaKnown RBP11.15□□□□□ -0.62
SMG7-215ENST00000515829 BHMT2Q9H2M3 363 aa11.15□□□□□ -0.62
SMG7-215ENST00000515829 METTL14Q9HCE5 456 aaKnown RBP11.15□□□□□ -0.62
SMG7-215ENST00000515829 USTQ9Y2C2 406 aa11.15□□□□□ -0.62
SMG7-215ENST00000515829 LEMD3Q9Y2U8 911 aa11.15□□□□□ -0.62
SMG7-215ENST00000515829 BZW2Q9Y6E2 419 aaKnown RBP11.15□□□□□ -0.62
SMG7-215ENST00000515829 MAP2K7O14733 419 aa11.15□□□□□ -0.62
SMG7-215ENST00000515829 GAS7O60861 476 aa11.15□□□□□ -0.62
SMG7-215ENST00000515829 GLE1Q53GS7 698 aaKnown RBP11.15□□□□□ -0.62
SMG7-215ENST00000515829 TTI2Q6NXR4 508 aa11.15□□□□□ -0.62
SMG7-215ENST00000515829 FAM186BQ8IYM0 893 aa11.15□□□□□ -0.62
SMG7-215ENST00000515829 ZIM3Q96PE6 472 aa11.15□□□□□ -0.62
SMG7-215ENST00000515829 CD2APQ9Y5K6 639 aa11.15□□□□□ -0.62
SMG7-215ENST00000515829 NTSR2O95665 410 aa11.15□□□□□ -0.63
SMG7-215ENST00000515829 ACTN1P12814 892 aa11.15□□□□□ -0.63
SMG7-215ENST00000515829 SERPINB13Q9UIV8 391 aa11.15□□□□□ -0.63
SMG7-215ENST00000515829 FAM208AQ9UK61 1670 aaKnown RBP11.14□□□□□ -0.63
SMG7-215ENST00000515829 POTEFA5A3E0 1075 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 RPSAP08865 295 aaKnown RBP11.14□□□□□ -0.63
SMG7-215ENST00000515829 POTEIP0CG38 1075 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 SEC24CP53992 1094 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 EVX2Q03828 476 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 POTEGQ6S5H5 508 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 POTEEQ6S8J3 1075 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 TCP11Q8WWU5 503 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 RSRC1Q96IZ7 334 aaKnown RBP11.14□□□□□ -0.63
SMG7-215ENST00000515829 MYCBPQ99417 103 aaPredicted RBP11.14□□□□□ -0.63
SMG7-215ENST00000515829 C7orf25Q9BPX7 421 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 FAM196BA6NMK8 535 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 HMGB1P1B2RPK0 211 aaPredicted RBP11.14□□□□□ -0.63
SMG7-215ENST00000515829 HOXA13P31271 388 aaPredicted RBP11.14□□□□□ -0.63
SMG7-215ENST00000515829 ODR4Q5SWX8 454 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 RNF10Q8N5U6 811 aaKnown RBP11.14□□□□□ -0.63
SMG7-215ENST00000515829 ARL8AQ96BM9 186 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 PBKQ96KB5 322 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 PCIF1Q9H4Z3 704 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 AKAP12Q02952 1782 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 USP17L10C9JJH3 530 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 EIF3HO15372 352 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMG7-215ENST00000515829 ZNF211Q13398 564 aaPredicted RBP11.14□□□□□ -0.63
SMG7-215ENST00000515829 TAOK1Q7L7X3 1001 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 FBXO11Q86XK2 927 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 DDX42Q86XP3 938 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMG7-215ENST00000515829 PIGOQ8TEQ8 1089 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 CCDC127Q96BQ5 260 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 PLCB1Q9NQ66 1216 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 INTS9Q9NV88 658 aaKnown RBP11.14□□□□□ -0.63
SMG7-215ENST00000515829 CERKLQ49MI3 558 aaPredicted RBP11.14□□□□□ -0.63
SMG7-215ENST00000515829 PAPD7Q5XG87 772 aaKnown RBP11.14□□□□□ -0.63
SMG7-215ENST00000515829 CLEC4GQ6UXB4 293 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 ZNF365Q70YC5 407 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 SH3RF1Q7Z6J0 888 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 SFR1Q86XK3 245 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 PPM1KQ8N3J5 372 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 MARCH10Q8NA82 808 aaPredicted RBP11.14□□□□□ -0.63
SMG7-215ENST00000515829 AMACRQ9UHK6 382 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 IKBKGQ9Y6K9 419 aa11.14□□□□□ -0.63
SMG7-215ENST00000515829 PNMA6FA0A0J9YX94 578 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 MAGOHP61326 146 aaKnown RBP11.13□□□□□ -0.63
SMG7-215ENST00000515829 MCTP2Q6DN12 878 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 CPXCR1Q8N123 301 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 SNX24Q9Y343 169 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 XRN1Q8IZH2 1706 aaKnown RBP11.13□□□□□ -0.63
SMG7-215ENST00000515829 FERP16591 822 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 CACNB3P54284 484 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 BIRC3Q13489 604 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 FAM133BQ5BKY9 247 aaKnown RBP11.13□□□□□ -0.63
SMG7-215ENST00000515829 CAPN12Q6ZSI9 719 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 FMO2Q99518 471 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 EHD4Q9H223 541 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 HOMER2Q9NSB8 354 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 GDF11O95390 407 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 ATP2B4P23634 1241 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 KLRC1P26715 233 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 ICA1Q05084 483 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 SNCBQ16143 134 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 CCDC6Q16204 474 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 RBM26Q5T8P6 1007 aaKnown RBP11.13□□□□□ -0.63
SMG7-215ENST00000515829 INTS8Q75QN2 995 aaKnown RBP11.13□□□□□ -0.63
SMG7-215ENST00000515829 NLRP14Q86W24 1093 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 FAM212AQ96EL1 285 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 ATP6V1G3Q96LB4 118 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 FAM114A2Q9NRY5 505 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 HARSP12081 509 aaKnown RBP11.13□□□□□ -0.63
SMG7-215ENST00000515829 CORO7P57737 925 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 SNX1Q13596 522 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 CTTNQ14247 550 aaKnown RBP11.13□□□□□ -0.63
SMG7-215ENST00000515829 GPATCH4Q5T3I0 446 aaKnown RBP11.13□□□□□ -0.63
SMG7-215ENST00000515829 TTBK2Q6IQ55 1244 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 DNAAF5Q86Y56 855 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 FBF1Q8TES7 1133 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 TEKT1Q969V4 418 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 DNAJC17Q9NVM6 304 aaKnown RBP11.13□□□□□ -0.63
SMG7-215ENST00000515829 MAD2L2Q9UI95 211 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 PLAGL2Q9UPG8 496 aa11.13□□□□□ -0.63
SMG7-215ENST00000515829 BCS1LQ9Y276 419 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms