RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 UNC93B1Q9H1C4 597 aa23.63■■□□□ 1.37
LSM6-207ENST00000515311 SYNRGQ9UMZ2 1314 aa23.62■■□□□ 1.37
LSM6-207ENST00000515311 POTEFA5A3E0 1075 aa23.62■■□□□ 1.37
LSM6-207ENST00000515311 A6NJR5 290 aa23.62■■□□□ 1.37
LSM6-207ENST00000515311 NOP56O00567 594 aaKnown RBP23.62■■□□□ 1.37
LSM6-207ENST00000515311 DYNC1LI2O43237 492 aaPredicted RBP23.62■■□□□ 1.37
LSM6-207ENST00000515311 CUTAO60888 179 aa23.62■■□□□ 1.37
LSM6-207ENST00000515311 PTGS1P23219 599 aa23.62■■□□□ 1.37
LSM6-207ENST00000515311 GJA9P57773 515 aa23.62■■□□□ 1.37
LSM6-207ENST00000515311 HSDL1Q3SXM5 330 aa23.62■■□□□ 1.37
LSM6-207ENST00000515311 ZNF579Q8NAF0 562 aaKnown RBP23.62■■□□□ 1.37
LSM6-207ENST00000515311 GPR20Q99678 358 aa23.62■■□□□ 1.37
LSM6-207ENST00000515311 MCOLN1Q9GZU1 580 aa23.62■■□□□ 1.37
LSM6-207ENST00000515311 GDPD2Q9HCC8 539 aa23.62■■□□□ 1.37
LSM6-207ENST00000515311 XPNPEP3Q9NQH7 507 aa23.62■■□□□ 1.37
LSM6-207ENST00000515311 LRWD1Q9UFC0 647 aa23.62■■□□□ 1.37
LSM6-207ENST00000515311 POTEMA6NI47 508 aa23.61■■□□□ 1.37
LSM6-207ENST00000515311 CHMP2AO43633 222 aa23.61■■□□□ 1.37
LSM6-207ENST00000515311 SORBS3O60504 671 aa23.61■■□□□ 1.37
LSM6-207ENST00000515311 ATG7O95352 703 aa23.61■■□□□ 1.37
LSM6-207ENST00000515311 HOXD8P13378 290 aaPredicted RBP23.61■■□□□ 1.37
LSM6-207ENST00000515311 CPT1AP50416 773 aa23.61■■□□□ 1.37
LSM6-207ENST00000515311 MTFR1Q15390 333 aa23.61■■□□□ 1.37
LSM6-207ENST00000515311 LHX8Q68G74 356 aa23.61■■□□□ 1.37
LSM6-207ENST00000515311 TMEM87AQ8NBN3 555 aa23.61■■□□□ 1.37
LSM6-207ENST00000515311 AFG1LQ8WV93 481 aa23.61■■□□□ 1.37
LSM6-207ENST00000515311 SPC25Q9HBM1 224 aa23.61■■□□□ 1.37
LSM6-207ENST00000515311 DISC1Q9NRI5 854 aa23.61■■□□□ 1.37
LSM6-207ENST00000515311 PCDHA7Q9UN72 937 aa23.61■■□□□ 1.37
LSM6-207ENST00000515311 PCDHA10Q9Y5I2 948 aa23.61■■□□□ 1.37
LSM6-207ENST00000515311 STK24Q9Y6E0 443 aa23.61■■□□□ 1.37
LSM6-207ENST00000515311 SP4Q02446 784 aa23.6■■□□□ 1.37
LSM6-207ENST00000515311 GRIN1Q05586 938 aa23.6■■□□□ 1.37
LSM6-207ENST00000515311 BRDTQ58F21 947 aaPredicted RBP23.6■■□□□ 1.37
LSM6-207ENST00000515311 AXDND1Q5T1B0 1012 aaPredicted RBP23.6■■□□□ 1.37
LSM6-207ENST00000515311 NCAPH2Q6IBW4 605 aa23.6■■□□□ 1.37
LSM6-207ENST00000515311 ABHD15Q6UXT9 468 aa23.6■■□□□ 1.37
LSM6-207ENST00000515311 MIER3Q7Z3K6 550 aa23.6■■□□□ 1.37
LSM6-207ENST00000515311 SEPT1Q8WYJ6 367 aa23.6■■□□□ 1.37
LSM6-207ENST00000515311 RNF208Q9H0X6 261 aa23.6■■□□□ 1.37
LSM6-207ENST00000515311 CSRNP2Q9H175 543 aa23.6■■□□□ 1.37
LSM6-207ENST00000515311 GSTTP1A0A1W2PQM5 241 aa23.59■■□□□ 1.37
LSM6-207ENST00000515311 EML1O00423 815 aa23.59■■□□□ 1.37
LSM6-207ENST00000515311 CTAGE5O15320 804 aa23.59■■□□□ 1.37
LSM6-207ENST00000515311 ADAMTS4O75173 837 aa23.59■■□□□ 1.37
LSM6-207ENST00000515311 PPFIA4O75335 1185 aa23.59■■□□□ 1.37
LSM6-207ENST00000515311 MMP3P08254 477 aa23.59■■□□□ 1.37
LSM6-207ENST00000515311 SUPT20HL2P0C7V6 817 aa23.59■■□□□ 1.37
LSM6-207ENST00000515311 EPHA7Q15375 998 aa23.59■■□□□ 1.37
LSM6-207ENST00000515311 FSCN1Q16658 493 aaKnown RBP23.59■■□□□ 1.37
LSM6-207ENST00000515311 MIS18BP1Q6P0N0 1132 aa23.59■■□□□ 1.37
LSM6-207ENST00000515311 ERMNQ8TAM6 284 aa23.59■■□□□ 1.37
LSM6-207ENST00000515311 NEK9Q8TD19 979 aa23.59■■□□□ 1.37
LSM6-207ENST00000515311 CLIC6Q96NY7 704 aa23.59■■□□□ 1.37
LSM6-207ENST00000515311 TELO2Q9Y4R8 837 aa23.59■■□□□ 1.37
LSM6-207ENST00000515311 SAMM50Q9Y512 469 aa23.59■■□□□ 1.37
LSM6-207ENST00000515311 MYH9P35579 1960 aaKnown RBP23.58■■□□□ 1.37
LSM6-207ENST00000515311 IGKV6D-21A0A0A0MT36 114 aa23.58■■□□□ 1.37
LSM6-207ENST00000515311 SLC26A4O43511 780 aa23.58■■□□□ 1.37
LSM6-207ENST00000515311 PSAPP07602 524 aa23.58■■□□□ 1.37
LSM6-207ENST00000515311 C6orf222P0C671 652 aaPredicted RBP23.58■■□□□ 1.37
LSM6-207ENST00000515311 CST5P28325 142 aaPredicted RBP23.58■■□□□ 1.37
LSM6-207ENST00000515311 TCF7P36402 384 aaPredicted RBP23.58■■□□□ 1.37
LSM6-207ENST00000515311 DGKDQ16760 1214 aa23.58■■□□□ 1.37
LSM6-207ENST00000515311 ADALQ6DHV7 355 aa23.58■■□□□ 1.37
LSM6-207ENST00000515311 EMSYQ7Z589 1322 aa23.58■■□□□ 1.36
LSM6-207ENST00000515311 PGK1P00558 417 aa23.57■■□□□ 1.36
LSM6-207ENST00000515311 HAUS3Q68CZ6 603 aa23.57■■□□□ 1.36
LSM6-207ENST00000515311 KLHDC9Q8NEP7 349 aa23.57■■□□□ 1.36
LSM6-207ENST00000515311 KPNA6O60684 536 aa23.56■■□□□ 1.36
LSM6-207ENST00000515311 LGR5O75473 907 aa23.56■■□□□ 1.36
LSM6-207ENST00000515311 KRT79Q5XKE5 535 aa23.56■■□□□ 1.36
LSM6-207ENST00000515311 RNF180Q86T96 592 aa23.56■■□□□ 1.36
LSM6-207ENST00000515311 DEFB118Q96PH6 123 aa23.56■■□□□ 1.36
LSM6-207ENST00000515311 HSD17B14Q9BPX1 270 aa23.56■■□□□ 1.36
LSM6-207ENST00000515311 EIF2AK1Q9BQI3 630 aaKnown RBP23.56■■□□□ 1.36
LSM6-207ENST00000515311 POLR3CQ9BUI4 534 aaPredicted RBP23.56■■□□□ 1.36
LSM6-207ENST00000515311 A0A1W2PQ27 194 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 A0A1W2PQ64 194 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 A0A1W2PQD8 194 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 MYADML2A6NDP7 307 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 PP2D1A8MPX8 630 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 ZEB2O60315 1214 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 MYCP01106 439 aaPredicted RBP23.55■■□□□ 1.36
LSM6-207ENST00000515311 P4HBP07237 508 aaKnown RBP23.55■■□□□ 1.36
LSM6-207ENST00000515311 GJB1P08034 283 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 RPA1P27694 616 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 UBA7P41226 1012 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 GNASQ5JWF2 1037 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 FAM160B1Q5W0V3 765 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 RESP18Q5W5W9 173 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 SHC4Q6S5L8 630 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 CCDC60Q8IWA6 550 aaPredicted RBP23.55■■□□□ 1.36
LSM6-207ENST00000515311 ARRDC4Q8NCT1 418 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 AFAP1L1Q8TED9 768 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 SNX29Q8TEQ0 813 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 SYMPKQ92797 1274 aaKnown RBP23.55■■□□□ 1.36
LSM6-207ENST00000515311 MMTAG2Q9BU76 263 aaKnown RBP23.55■■□□□ 1.36
LSM6-207ENST00000515311 CCSER1Q9C0I3 900 aa23.55■■□□□ 1.36
LSM6-207ENST00000515311 TUFT1Q9NNX1 390 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms