RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SDF4Q9BRK5 362 aa27.95■■■□□ 2.06
SNF8-213ENST00000514929 ZNF576Q9H609 170 aa27.95■■■□□ 2.06
SNF8-213ENST00000514929 GSTTP1A0A1W2PQM5 241 aa27.94■■■□□ 2.06
SNF8-213ENST00000514929 CPLX1O14810 134 aa27.94■■■□□ 2.06
SNF8-213ENST00000514929 HOXC8P31273 242 aa27.94■■■□□ 2.06
SNF8-213ENST00000514929 ZNF618Q5T7W0 954 aa27.94■■■□□ 2.06
SNF8-213ENST00000514929 TRIM22Q8IYM9 498 aa27.94■■■□□ 2.06
SNF8-213ENST00000514929 CCDC148Q8NFR7 591 aa27.94■■■□□ 2.06
SNF8-213ENST00000514929 JPH1Q9HDC5 661 aaPredicted RBP27.94■■■□□ 2.06
SNF8-213ENST00000514929 SETD4Q9NVD3 440 aa27.94■■■□□ 2.06
SNF8-213ENST00000514929 COL6A3P12111 3177 aa27.94■■■□□ 2.06
SNF8-213ENST00000514929 TREHO43280 583 aa27.93■■■□□ 2.06
SNF8-213ENST00000514929 ARP10275 920 aa27.93■■■□□ 2.06
SNF8-213ENST00000514929 ATP2A2P16615 1042 aaKnown RBP27.93■■■□□ 2.06
SNF8-213ENST00000514929 THPOP40225 353 aa27.93■■■□□ 2.06
SNF8-213ENST00000514929 STK3Q13188 491 aa27.93■■■□□ 2.06
SNF8-213ENST00000514929 BICD2Q8TD16 824 aa27.93■■■□□ 2.06
SNF8-213ENST00000514929 MYLIPQ8WY64 445 aa27.93■■■□□ 2.06
SNF8-213ENST00000514929 GLG1Q92896 1179 aa27.93■■■□□ 2.06
SNF8-213ENST00000514929 SLC9A2Q9UBY0 812 aa27.93■■■□□ 2.06
SNF8-213ENST00000514929 MEIS1O00470 390 aa27.92■■■□□ 2.06
SNF8-213ENST00000514929 SSRP1Q08945 709 aaKnown RBP27.92■■■□□ 2.06
SNF8-213ENST00000514929 CPLX2Q6PUV4 134 aaKnown RBP27.92■■■□□ 2.06
SNF8-213ENST00000514929 VPS54Q9P1Q0 977 aa27.92■■■□□ 2.06
SNF8-213ENST00000514929 NFASCO94856 1347 aa27.92■■■□□ 2.06
SNF8-213ENST00000514929 ADAMTS3O15072 1205 aa27.91■■■□□ 2.06
SNF8-213ENST00000514929 BAIAP3O94812 1187 aa27.91■■■□□ 2.06
SNF8-213ENST00000514929 RABGGTBP53611 331 aa27.91■■■□□ 2.06
SNF8-213ENST00000514929 GPNMBQ14956 572 aa27.91■■■□□ 2.06
SNF8-213ENST00000514929 GRIN2CQ14957 1233 aa27.91■■■□□ 2.06
SNF8-213ENST00000514929 NIPA1Q7RTP0 329 aa27.91■■■□□ 2.06
SNF8-213ENST00000514929 SMARCAD1Q9H4L7 1026 aa27.91■■■□□ 2.06
SNF8-213ENST00000514929 AGO4Q9HCK5 861 aaKnown RBP27.91■■■□□ 2.06
SNF8-213ENST00000514929 ERAP1Q9NZ08 941 aa27.91■■■□□ 2.06
SNF8-213ENST00000514929 EIF5BO60841 1220 aaKnown RBP27.9■■■□□ 2.06
SNF8-213ENST00000514929 NBNO60934 754 aa27.9■■■□□ 2.06
SNF8-213ENST00000514929 MARK3P27448 753 aa27.9■■■□□ 2.06
SNF8-213ENST00000514929 ANAPC15P60006 121 aa27.9■■■□□ 2.06
SNF8-213ENST00000514929 CNKSR3Q6P9H4 555 aa27.9■■■□□ 2.06
SNF8-213ENST00000514929 PLA2G4DQ86XP0 818 aa27.9■■■□□ 2.06
SNF8-213ENST00000514929 LMBR1Q8WVP7 490 aa27.9■■■□□ 2.06
SNF8-213ENST00000514929 SLC9A7Q96T83 725 aa27.9■■■□□ 2.06
SNF8-213ENST00000514929 NKX2-4Q9H2Z4 354 aa27.9■■■□□ 2.06
SNF8-213ENST00000514929 SLC28A3Q9HAS3 691 aa27.9■■■□□ 2.06
SNF8-213ENST00000514929 YBX2Q9Y2T7 364 aaKnown RBP27.9■■■□□ 2.06
SNF8-213ENST00000514929 NRCAMQ92823 1304 aa27.9■■■□□ 2.06
SNF8-213ENST00000514929 GBF1Q92538 1859 aa27.89■■■□□ 2.06
SNF8-213ENST00000514929 RSPH10B2B2RC85 870 aa27.89■■■□□ 2.06
SNF8-213ENST00000514929 CXCL10P02778 98 aa27.89■■■□□ 2.06
SNF8-213ENST00000514929 CYP3A4P08684 503 aa27.89■■■□□ 2.06
SNF8-213ENST00000514929 RSPH10BP0C881 870 aa27.89■■■□□ 2.06
SNF8-213ENST00000514929 FOSL2P15408 326 aa27.89■■■□□ 2.06
SNF8-213ENST00000514929 KCNJ6P48051 423 aa27.89■■■□□ 2.06
SNF8-213ENST00000514929 ITGB3BPQ13352 177 aaPredicted RBP27.89■■■□□ 2.06
SNF8-213ENST00000514929 TRAF7Q6Q0C0 670 aa27.89■■■□□ 2.06
SNF8-213ENST00000514929 RASGRP4Q8TDF6 673 aa27.89■■■□□ 2.06
SNF8-213ENST00000514929 AZI2Q9H6S1 392 aa27.89■■■□□ 2.06
SNF8-213ENST00000514929 SH3GLB2Q9NR46 395 aa27.89■■■□□ 2.06
SNF8-213ENST00000514929 PCDHA11Q9Y5I1 949 aa27.89■■■□□ 2.06
SNF8-213ENST00000514929 EMSYQ7Z589 1322 aa27.89■■■□□ 2.05
SNF8-213ENST00000514929 TET1Q8NFU7 2136 aa27.88■■■□□ 2.05
SNF8-213ENST00000514929 FAM86B1E9PN63 330 aa27.88■■■□□ 2.05
SNF8-213ENST00000514929 FAM86B2P0C5J1 330 aa27.88■■■□□ 2.05
SNF8-213ENST00000514929 NLRP5P59047 1200 aa27.88■■■□□ 2.05
SNF8-213ENST00000514929 ACTR2P61160 394 aa27.88■■■□□ 2.05
SNF8-213ENST00000514929 PPFIA1Q13136 1202 aa27.88■■■□□ 2.05
SNF8-213ENST00000514929 SLC17A8Q8NDX2 589 aa27.88■■■□□ 2.05
SNF8-213ENST00000514929 PHOSPHO2Q8TCD6 241 aa27.88■■■□□ 2.05
SNF8-213ENST00000514929 CRYGNQ8WXF5 182 aa27.88■■■□□ 2.05
SNF8-213ENST00000514929 DEXIO95424 95 aa27.87■■■□□ 2.05
SNF8-213ENST00000514929 MBTPS1Q14703 1052 aa27.87■■■□□ 2.05
SNF8-213ENST00000514929 DDX39AO00148 427 aaKnown RBP27.86■■■□□ 2.05
SNF8-213ENST00000514929 CAND2O75155 1236 aa27.86■■■□□ 2.05
SNF8-213ENST00000514929 LGR5O75473 907 aa27.86■■■□□ 2.05
SNF8-213ENST00000514929 MYOGP15173 224 aa27.86■■■□□ 2.05
SNF8-213ENST00000514929 ADAM17P78536 824 aa27.86■■■□□ 2.05
SNF8-213ENST00000514929 CDH23Q9H251 3354 aa27.85■■■□□ 2.05
SNF8-213ENST00000514929 IGLV3-22A0A075B6J6 115 aa27.85■■■□□ 2.05
SNF8-213ENST00000514929 CTSHP09668 335 aa27.85■■■□□ 2.05
SNF8-213ENST00000514929 WDR5P61964 334 aaKnown RBP27.85■■■□□ 2.05
SNF8-213ENST00000514929 SETQ01105 290 aaPredicted RBP27.85■■■□□ 2.05
SNF8-213ENST00000514929 GRIK4Q16099 956 aa27.85■■■□□ 2.05
SNF8-213ENST00000514929 PPP2R2DQ66LE6 453 aa27.85■■■□□ 2.05
SNF8-213ENST00000514929 HERC6Q8IVU3 1022 aa27.85■■■□□ 2.05
SNF8-213ENST00000514929 PCYT2Q99447 389 aa27.85■■■□□ 2.05
SNF8-213ENST00000514929 SLKQ9H2G2 1235 aaPredicted RBP27.85■■■□□ 2.05
SNF8-213ENST00000514929 ABHD14A-ACY1A0A1B0GW23 586 aa27.84■■■□□ 2.05
SNF8-213ENST00000514929 IPO5O00410 1097 aaKnown RBP27.84■■■□□ 2.05
SNF8-213ENST00000514929 CDKL5O76039 1030 aa27.84■■■□□ 2.05
SNF8-213ENST00000514929 IKBKEQ14164 716 aa27.84■■■□□ 2.05
SNF8-213ENST00000514929 ANKRD1Q15327 319 aa27.84■■■□□ 2.05
SNF8-213ENST00000514929 TNPO1Q92973 898 aaKnown RBP27.84■■■□□ 2.05
SNF8-213ENST00000514929 UIMC1Q96RL1 719 aa27.84■■■□□ 2.05
SNF8-213ENST00000514929 ZNF577Q9BSK1 485 aa27.84■■■□□ 2.05
SNF8-213ENST00000514929 KAT6AQ92794 2004 aa27.84■■■□□ 2.05
SNF8-213ENST00000514929 KIF28PB7ZC32 967 aa27.83■■■□□ 2.05
SNF8-213ENST00000514929 EFCAB14O75071 495 aa27.83■■■□□ 2.05
SNF8-213ENST00000514929 STAT5BP51692 787 aa27.83■■■□□ 2.05
SNF8-213ENST00000514929 IGBP1P78318 339 aa27.83■■■□□ 2.05
SNF8-213ENST00000514929 SCRN1Q12765 414 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms