RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 TRIM60Q495X7 471 aa16.14■□□□□ 0.17
NUP54-216ENST00000514901 MCTP1Q6DN14 999 aa16.14■□□□□ 0.17
NUP54-216ENST00000514901 SESTD1Q86VW0 696 aa16.14■□□□□ 0.17
NUP54-216ENST00000514901 SMAP1Q8IYB5 467 aaPredicted RBP16.14■□□□□ 0.17
NUP54-216ENST00000514901 SMARCAD1Q9H4L7 1026 aa16.14■□□□□ 0.17
NUP54-216ENST00000514901 TUT1Q9H6E5 874 aaKnown RBP16.14■□□□□ 0.17
NUP54-216ENST00000514901 NOL7Q9UMY1 257 aaKnown RBP16.14■□□□□ 0.17
NUP54-216ENST00000514901 TNRC18O15417 2968 aaPredicted RBP16.14■□□□□ 0.17
NUP54-216ENST00000514901 FAM205CA6NFA0 338 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 HAS3O00219 553 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 MARCH6O60337 910 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 PQBP1O60828 265 aaKnown RBP16.13■□□□□ 0.17
NUP54-216ENST00000514901 LGR5O75473 907 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 SUPT20HL2P0C7V6 817 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 ZNF286BP0CG31 522 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 KIAA0753Q2KHM9 967 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 UTP14CQ5TAP6 766 aaKnown RBP16.13■□□□□ 0.17
NUP54-216ENST00000514901 LRCH2Q5VUJ6 765 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 MIS18BP1Q6P0N0 1132 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 SLFN12Q8IYM2 578 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 C7orf61Q8IZ16 206 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 ETNPPLQ8TBG4 499 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 TNPO1Q92973 898 aaKnown RBP16.13■□□□□ 0.17
NUP54-216ENST00000514901 TEKT3Q9BXF9 490 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 AZI2Q9H6S1 392 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 KCNMB3Q9NPA1 279 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 PRKAG2Q9UGJ0 569 aa16.13■□□□□ 0.17
NUP54-216ENST00000514901 DOCK5Q9H7D0 1870 aa16.12■□□□□ 0.17
NUP54-216ENST00000514901 DDX39AO00148 427 aaKnown RBP16.12■□□□□ 0.17
NUP54-216ENST00000514901 SLC37A4O43826 429 aa16.12■□□□□ 0.17
NUP54-216ENST00000514901 SFNP31947 248 aa16.12■□□□□ 0.17
NUP54-216ENST00000514901 ABHD15Q6UXT9 468 aa16.12■□□□□ 0.17
NUP54-216ENST00000514901 PLPPR4Q7Z2D5 763 aa16.12■□□□□ 0.17
NUP54-216ENST00000514901 FAM126BQ8IXS8 530 aa16.12■□□□□ 0.17
NUP54-216ENST00000514901 C7orf31Q8N865 590 aa16.12■□□□□ 0.17
NUP54-216ENST00000514901 RDM1Q8NG50 284 aa16.12■□□□□ 0.17
NUP54-216ENST00000514901 GLG1Q92896 1179 aa16.12■□□□□ 0.17
NUP54-216ENST00000514901 ERAP1Q9NZ08 941 aa16.12■□□□□ 0.17
NUP54-216ENST00000514901 PCDHA10Q9Y5I2 948 aa16.12■□□□□ 0.17
NUP54-216ENST00000514901 IGKV6D-21A0A0A0MT36 114 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 WDR64B1ANS9 1081 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 KIF28PB7ZC32 967 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 NEMFO60524 1076 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 PSMD10O75832 226 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 CCNE2O96020 404 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 PSAPP07602 524 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 CLTBP09497 229 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 SLC26A2P50443 739 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 STAT5BP51692 787 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 JAK3P52333 1124 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 CHMP4BP1P59074 171 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 BECN1Q14457 450 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 FAM47CQ5HY64 1035 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 FAM160B1Q5W0V3 765 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 UIMC1Q96RL1 719 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 TELO2Q9Y4R8 837 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 EMSYQ7Z589 1322 aa16.11■□□□□ 0.17
NUP54-216ENST00000514901 ALPK3Q96L96 1907 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 BACH1O14867 736 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 CD4P01730 458 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 GNAT1P11488 350 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 ATP2B1P20020 1258 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 SYT1P21579 422 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 FAAP100Q0VG06 881 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 CALCRLQ16602 461 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 RILPL1Q5EBL4 403 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 TTC38Q5R3I4 469 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 AFAP1L1Q8TED9 768 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 HAS1Q92839 578 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 DISC1Q9NRI5 854 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 FOXD4L1Q9NU39 408 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 TMEM39AQ9NV64 488 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 HDAC6Q9UBN7 1215 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 GTF2IRD1Q9UHL9 959 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 SAMM50Q9Y512 469 aa16.1■□□□□ 0.17
NUP54-216ENST00000514901 KIAA0355O15063 1070 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 MCM7P33993 719 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 PPP2R5CQ13362 524 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 SWSAP1Q6NVH7 229 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 B3GNT9Q6UX72 402 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 MIER3Q7Z3K6 550 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 BRAPQ7Z569 592 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 MTMR9Q96QG7 549 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 PCYT2Q99447 389 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 UNC45AQ9H3U1 944 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 ZNF302Q9NR11 478 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 PDLIM7Q9NR12 457 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 PCDHA12Q9UN75 941 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 KAT6AQ92794 2004 aa16.09■□□□□ 0.17
NUP54-216ENST00000514901 VPS37CA5D8V6 355 aaPredicted RBP16.08■□□□□ 0.16
NUP54-216ENST00000514901 B4GALT4O60513 344 aa16.08■□□□□ 0.16
NUP54-216ENST00000514901 SMIM10L2AP0DMW4 78 aa16.08■□□□□ 0.16
NUP54-216ENST00000514901 SMIM10L2BP0DMW5 78 aa16.08■□□□□ 0.16
NUP54-216ENST00000514901 ZNF174Q15697 407 aa16.08■□□□□ 0.16
NUP54-216ENST00000514901 PDXDC2PQ6P474 469 aa16.08■□□□□ 0.16
NUP54-216ENST00000514901 TRIM50Q86XT4 487 aa16.08■□□□□ 0.16
NUP54-216ENST00000514901 GJA10Q969M2 543 aa16.08■□□□□ 0.16
NUP54-216ENST00000514901 TRPV6Q9H1D0 765 aa16.08■□□□□ 0.16
NUP54-216ENST00000514901 RNPEPQ9H4A4 650 aa16.08■□□□□ 0.16
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