RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 UHMK1Q8TAS1 419 aaKnown RBP6.73□□□□□ -1.33
RFC1-216ENST00000514572 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.73□□□□□ -1.33
RFC1-216ENST00000514572 HHIPL1Q96JK4 782 aa6.73□□□□□ -1.33
RFC1-216ENST00000514572 JMJD8Q96S16 334 aa6.73□□□□□ -1.33
RFC1-216ENST00000514572 SLC6A20Q9NP91 592 aa6.73□□□□□ -1.33
RFC1-216ENST00000514572 PRDM11Q9NQV5 511 aa6.73□□□□□ -1.33
RFC1-216ENST00000514572 CCM2LQ9NUG4 571 aaPredicted RBP6.73□□□□□ -1.33
RFC1-216ENST00000514572 GULP1Q9UBP9 304 aa6.73□□□□□ -1.33
RFC1-216ENST00000514572 EBF1Q9UH73 591 aa6.73□□□□□ -1.33
RFC1-216ENST00000514572 ZBTB21Q9ULJ3 1066 aa6.73□□□□□ -1.33
RFC1-216ENST00000514572 KCNK3O14649 394 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 CLASP2O75122 1294 aaKnown RBP6.72□□□□□ -1.33
RFC1-216ENST00000514572 KRT37O76014 449 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 ASGR2P07307 311 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 COL6A2P12110 1019 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 TRIM27P14373 513 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 KRT15P19012 456 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 PTX3P26022 381 aaPredicted RBP6.72□□□□□ -1.33
RFC1-216ENST00000514572 CYP2C19P33261 490 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 EPHA5P54756 1037 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 HTRA3P83110 453 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 GALEQ14376 348 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 ZNF174Q15697 407 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 SYCP2LQ5T4T6 812 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 MROH9Q5TGP6 573 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 ARHGAP27Q6ZUM4 889 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 PIP4K2CQ8TBX8 421 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 RUNDC1Q96C34 613 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 TRMT2BQ96GJ1 504 aaKnown RBP6.72□□□□□ -1.33
RFC1-216ENST00000514572 OSBPL1AQ9BXW6 950 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 PDGFDQ9GZP0 370 aaPredicted RBP6.72□□□□□ -1.33
RFC1-216ENST00000514572 ACSS2Q9NR19 701 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 MARCH2Q9P0N8 246 aa6.72□□□□□ -1.33
RFC1-216ENST00000514572 A0A1W2PQ45 241 aaPredicted RBP6.71□□□□□ -1.34
RFC1-216ENST00000514572 A0A1W2PQY0 241 aa6.71□□□□□ -1.34
RFC1-216ENST00000514572 C22orf46C9J442 243 aa6.71□□□□□ -1.34
RFC1-216ENST00000514572 CCND1P24385 295 aa6.71□□□□□ -1.34
RFC1-216ENST00000514572 KIF11P52732 1056 aa6.71□□□□□ -1.34
RFC1-216ENST00000514572 SCAND1P57086 179 aa6.71□□□□□ -1.34
RFC1-216ENST00000514572 MINDY4Q4G0A6 757 aa6.71□□□□□ -1.34
RFC1-216ENST00000514572 CC2D1AQ6P1N0 951 aaPredicted RBP6.71□□□□□ -1.34
RFC1-216ENST00000514572 PGM2L1Q6PCE3 622 aa6.71□□□□□ -1.34
RFC1-216ENST00000514572 B3GNT9Q6UX72 402 aa6.71□□□□□ -1.34
RFC1-216ENST00000514572 HSPBAP1Q96EW2 488 aa6.71□□□□□ -1.34
RFC1-216ENST00000514572 C16orf92Q96LL3 132 aa6.71□□□□□ -1.34
RFC1-216ENST00000514572 LRRC4CQ9HCJ2 640 aa6.71□□□□□ -1.34
RFC1-216ENST00000514572 ZNF277Q9NRM2 450 aaPredicted RBP6.71□□□□□ -1.34
RFC1-216ENST00000514572 TOMM22Q9NS69 142 aa6.71□□□□□ -1.34
RFC1-216ENST00000514572 MKS1Q9NXB0 559 aa6.71□□□□□ -1.34
RFC1-216ENST00000514572 LCHNA4D1U4 455 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 ERC2O15083 957 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 GSC2O15499 205 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 KDM1AO60341 852 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 DGKIO75912 1065 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 IGLV1-40P01703 118 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 CYP17A1P05093 508 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 CT47B1P0C2W7 299 aaPredicted RBP6.7□□□□□ -1.34
RFC1-216ENST00000514572 GATA4P43694 442 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 CPZQ66K79 652 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 CYP4F22Q6NT55 531 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 PNMA8AQ86V59 439 aaPredicted RBP6.7□□□□□ -1.34
RFC1-216ENST00000514572 ZDHHC13Q8IUH4 622 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 TIFAQ96CG3 184 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 CLIP3Q96DZ5 547 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 TEKT5Q96M29 485 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 SARGQ9BW04 601 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 SLC12A5Q9H2X9 1139 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 PCIF1Q9H4Z3 704 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 TPSG1Q9NRR2 321 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 KCNH7Q9NS40 1196 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 ATG3Q9NT62 314 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 BTG4Q9NY30 223 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 ZC3H7BQ9UGR2 993 aaKnown RBP6.7□□□□□ -1.34
RFC1-216ENST00000514572 DSEQ9UL01 958 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 TELO2Q9Y4R8 837 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 COMMD10Q9Y6G5 202 aa6.7□□□□□ -1.34
RFC1-216ENST00000514572 PRR19A6NJB7 356 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 HIP1RO75146 1068 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 FURINP09958 794 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 FOSL1P15407 271 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 VCAM1P19320 739 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 SDHAP31040 664 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 KIR2DL1P43626 348 aaPredicted RBP6.69□□□□□ -1.34
RFC1-216ENST00000514572 KIR2DL2P43627 348 aaPredicted RBP6.69□□□□□ -1.34
RFC1-216ENST00000514572 MTNR1BP49286 362 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 FNTBP49356 437 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 GRM3Q14832 879 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 EPHA7Q15375 998 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 VPS72Q15906 364 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 RRP12Q5JTH9 1297 aaKnown RBP6.69□□□□□ -1.34
RFC1-216ENST00000514572 CATSPEREQ5SY80 951 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 SLC4A10Q6U841 1118 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 FRMD7Q6ZUT3 714 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 ZZZ3Q8IYH5 903 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 NLGN4XQ8N0W4 816 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 SSH1Q8WYL5 1049 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 ASIC4Q96FT7 647 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 ACAP3Q96P50 834 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 CD244Q9BZW8 370 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 USP36Q9P275 1121 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms