RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 ATRIPQ8WXE1 791 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 ATP6V0A1Q93050 837 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 CCDC8Q9H0W5 538 aaPredicted RBP3.88□□□□□ -1.79
CHD1-211ENST00000514344 RC3H2Q9HBD1 1191 aaKnown RBP3.88□□□□□ -1.79
CHD1-211ENST00000514344 CCPG1Q9ULG6 757 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 SMG5Q9UPR3 1016 aaKnown RBP3.88□□□□□ -1.79
CHD1-211ENST00000514344 FPGT-TNNI3KV9GXZ4 949 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 KIAA1671Q9BY89 1806 aa3.88□□□□□ -1.79
CHD1-211ENST00000514344 MYH4Q9Y623 1939 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 HIDE1A8MVS5 230 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 TREHO43280 583 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 DGKIO75912 1065 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 GHRP10912 638 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 BMP3P12645 472 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 SPINK2P20155 84 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 CA8P35219 290 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 GATMP50440 423 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 TBC1D8BQ0IIM8 1120 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 OS9Q13438 667 aaPredicted RBP3.87□□□□□ -1.79
CHD1-211ENST00000514344 TDGQ13569 410 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 N4BP2L1Q5TBK1 243 aaPredicted RBP3.87□□□□□ -1.79
CHD1-211ENST00000514344 C12orf60Q5U649 245 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 C16orf86Q6ZW13 317 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 KCTD1Q719H9 257 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 RASGRP2Q7LDG7 609 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 SERINC5Q86VE9 423 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 AMOTL1Q8IY63 956 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 MORC4Q8TE76 937 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 TBC1D17Q9HA65 648 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 TMEM260Q9NX78 707 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 DBNLQ9UJU6 430 aaKnown RBP3.87□□□□□ -1.79
CHD1-211ENST00000514344 SIT1Q9Y3P8 196 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 ZNF532Q9HCE3 1301 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 ASXL3Q9C0F0 2248 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 PNMA6EA0A0J9YXQ4 647 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 RBM47A0AV96 593 aaKnown RBP3.87□□□□□ -1.79
CHD1-211ENST00000514344 MCCP23508 829 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 PMLP29590 882 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 ST13P5Q8NFI4 369 aaPredicted RBP3.87□□□□□ -1.79
CHD1-211ENST00000514344 RSAD2Q8WXG1 361 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 SSH1Q8WYL5 1049 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 ZNF689Q96CS4 500 aaPredicted RBP3.87□□□□□ -1.79
CHD1-211ENST00000514344 KATNAL1Q9BW62 490 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 FOXQ1Q9C009 403 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 KCNK12Q9HB15 430 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 MKNK2Q9HBH9 465 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 ENTPD7Q9NQZ7 604 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 HCSTQ9UBK5 93 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 SUPT16HQ9Y5B9 1047 aaKnown RBP3.87□□□□□ -1.79
CHD1-211ENST00000514344 HCFC2Q9Y5Z7 792 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 PIEZO2Q9H5I5 2752 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 ZNF462Q96JM2 2506 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 TTC3P53804 2025 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 SRRM3A6NNA2 597 aaPredicted RBP3.87□□□□□ -1.79
CHD1-211ENST00000514344 SLC30A4O14863 429 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 PRDM1O75626 825 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 F2P00734 622 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 GLULP15104 373 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 PDE6AP16499 860 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 SLC1A4P43007 532 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 RBM25P49756 843 aaKnown RBP3.87□□□□□ -1.79
CHD1-211ENST00000514344 ARHGAP1Q07960 439 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 KCNC3Q14003 757 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 RARS2Q5T160 578 aaKnown RBP3.87□□□□□ -1.79
CHD1-211ENST00000514344 SLFN13Q68D06 897 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 TSSK4Q6SA08 328 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 THNSL1Q8IYQ7 743 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 MAML2Q8IZL2 1156 aaPredicted RBP3.87□□□□□ -1.79
CHD1-211ENST00000514344 NETO1Q8TDF5 533 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 CEP95Q96GE4 821 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 TCF25Q9BQ70 676 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 ADAM7Q9H2U9 754 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 CYP26B1Q9NR63 512 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 AAASQ9NRG9 546 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 NYAP2Q9P242 653 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 DUSP12Q9UNI6 340 aa3.87□□□□□ -1.79
CHD1-211ENST00000514344 RALGAPA1Q6GYQ0 2036 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 FGF18O76093 207 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 MBD4O95243 580 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 GH1P01241 217 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 CHGBP05060 677 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 HOXB8P17481 243 aaPredicted RBP3.86□□□□□ -1.79
CHD1-211ENST00000514344 RPS6P62753 249 aaKnown RBP3.86□□□□□ -1.79
CHD1-211ENST00000514344 CSTF1Q05048 431 aaKnown RBP3.86□□□□□ -1.79
CHD1-211ENST00000514344 CCDC184Q52MB2 194 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 XRRA1Q6P2D8 792 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 TMC5Q6UXY8 1006 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 LURAP1LQ8IV03 231 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 WDR63Q8IWG1 891 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 PLCD3Q8N3E9 789 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 APBB2Q92870 758 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 NECTIN4Q96NY8 510 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 SPATA6Q9NWH7 488 aaPredicted RBP3.86□□□□□ -1.79
CHD1-211ENST00000514344 GMEB2Q9UKD1 530 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 RELNP78509 3460 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 C17orf102A2RUQ5 167 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 ENPP3O14638 875 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 SPTLC1O15269 473 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 LAMTOR5O43504 91 aa3.86□□□□□ -1.79
CHD1-211ENST00000514344 EOMESO95936 686 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms