RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 ZSWIM4Q9H7M6 989 aa17.87■□□□□ 0.45
NUP54-214ENST00000514307 ZFYVE28Q9HCC9 887 aa17.87■□□□□ 0.45
NUP54-214ENST00000514307 NFASCO94856 1347 aa17.87■□□□□ 0.45
NUP54-214ENST00000514307 WDR64B1ANS9 1081 aa17.86■□□□□ 0.45
NUP54-214ENST00000514307 CHMP2AO43633 222 aa17.86■□□□□ 0.45
NUP54-214ENST00000514307 PEX10O60683 326 aa17.86■□□□□ 0.45
NUP54-214ENST00000514307 EYA4O95677 639 aa17.86■□□□□ 0.45
NUP54-214ENST00000514307 SSBP05455 408 aaKnown RBP eCLIP17.86■□□□□ 0.45
NUP54-214ENST00000514307 KRT18P05783 430 aaKnown RBP17.86■□□□□ 0.45
NUP54-214ENST00000514307 EDNRBP24530 442 aa17.86■□□□□ 0.45
NUP54-214ENST00000514307 ASIC1P78348 528 aa17.86■□□□□ 0.45
NUP54-214ENST00000514307 C11orf57Q6ZUT1 292 aaPredicted RBP17.86■□□□□ 0.45
NUP54-214ENST00000514307 LUZP1Q86V48 1076 aa17.86■□□□□ 0.45
NUP54-214ENST00000514307 SMAP1Q8IYB5 467 aaPredicted RBP17.86■□□□□ 0.45
NUP54-214ENST00000514307 DYDC2Q96IM9 177 aa17.86■□□□□ 0.45
NUP54-214ENST00000514307 EXOC1Q9NV70 894 aa17.86■□□□□ 0.45
NUP54-214ENST00000514307 LOC285556D6RIA3 1793 aa17.86■□□□□ 0.45
NUP54-214ENST00000514307 RLFQ13129 1914 aa17.86■□□□□ 0.45
NUP54-214ENST00000514307 OTOFQ9HC10 1997 aa17.86■□□□□ 0.45
NUP54-214ENST00000514307 POTEB3A0JP26 581 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 E9PMD0 336 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 RHOBTB3O94955 611 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 QARSP47897 775 aaKnown RBP17.85■□□□□ 0.45
NUP54-214ENST00000514307 TM4SF4P48230 202 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 ITGB3BPQ13352 177 aaPredicted RBP17.85■□□□□ 0.45
NUP54-214ENST00000514307 NEDD9Q14511 834 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 TAF1CQ15572 869 aaPredicted RBP17.85■□□□□ 0.45
NUP54-214ENST00000514307 ECM1Q16610 540 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 KMT5BQ4FZB7 885 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 POTEBQ6S5H4 581 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 PLEKHH3Q7Z736 793 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 IFNL1Q8IU54 200 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 CCDC65Q8IXS2 484 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 EFCC1Q9HA90 598 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 RGL1Q9NZL6 768 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 PKD2L1Q9P0L9 805 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 DIS3Q9Y2L1 958 aaKnown RBP17.85■□□□□ 0.45
NUP54-214ENST00000514307 PCDHA10Q9Y5I2 948 aa17.85■□□□□ 0.45
NUP54-214ENST00000514307 DDX39AO00148 427 aaKnown RBP17.84■□□□□ 0.45
NUP54-214ENST00000514307 ATP9AO75110 1047 aa17.84■□□□□ 0.45
NUP54-214ENST00000514307 ALDH1A1P00352 501 aa17.84■□□□□ 0.45
NUP54-214ENST00000514307 PGK2P07205 417 aa17.84■□□□□ 0.45
NUP54-214ENST00000514307 PSAPP07602 524 aa17.84■□□□□ 0.45
NUP54-214ENST00000514307 MYL5Q02045 173 aa17.84■□□□□ 0.45
NUP54-214ENST00000514307 CTTNQ14247 550 aaKnown RBP17.84■□□□□ 0.45
NUP54-214ENST00000514307 SEPT14Q6ZU15 432 aa17.84■□□□□ 0.45
NUP54-214ENST00000514307 UNC13DQ70J99 1090 aa17.84■□□□□ 0.45
NUP54-214ENST00000514307 ZNF467Q7Z7K2 595 aaPredicted RBP17.84■□□□□ 0.45
NUP54-214ENST00000514307 DPP9Q86TI2 863 aa17.84■□□□□ 0.45
NUP54-214ENST00000514307 ENOX1Q8TC92 643 aaKnown RBP17.84■□□□□ 0.45
NUP54-214ENST00000514307 MORC4Q8TE76 937 aa17.84■□□□□ 0.45
NUP54-214ENST00000514307 DDX12PQ92771 950 aa17.84■□□□□ 0.45
NUP54-214ENST00000514307 PORCNQ9H237 461 aa17.84■□□□□ 0.45
NUP54-214ENST00000514307 KCND2Q9NZV8 630 aa17.84■□□□□ 0.45
NUP54-214ENST00000514307 MYMKA6NI61 221 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 SLC15A5A6NIM6 579 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 KIF20AO95235 890 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 LYPLA2O95372 231 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 CASP1P29466 404 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 PSMC5P62195 406 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 PLCB2Q00722 1185 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 CYP4A11Q02928 519 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 CCDC173Q0VFZ6 552 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 MIS18BP1Q6P0N0 1132 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 OTUD6AQ7L8S5 288 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 KCNK18Q7Z418 384 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 GPBP1Q86WP2 473 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 AOPEPQ8N6M6 819 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 SLC9A2Q9UBY0 812 aa17.83■□□□□ 0.44
NUP54-214ENST00000514307 MYH7BA7E2Y1 1941 aa17.82■□□□□ 0.44
NUP54-214ENST00000514307 POTEFA5A3E0 1075 aa17.82■□□□□ 0.44
NUP54-214ENST00000514307 FAM155AB1AL88 458 aaPredicted RBP17.82■□□□□ 0.44
NUP54-214ENST00000514307 KLRC4O43908 158 aa17.82■□□□□ 0.44
NUP54-214ENST00000514307 RGS20O76081 388 aa17.82■□□□□ 0.44
NUP54-214ENST00000514307 IDEP14735 1019 aa17.82■□□□□ 0.44
NUP54-214ENST00000514307 KCNA2P16389 499 aa17.82■□□□□ 0.44
NUP54-214ENST00000514307 BMP6P22004 513 aa17.82■□□□□ 0.44
NUP54-214ENST00000514307 SLC12A3P55017 1021 aa17.82■□□□□ 0.44
NUP54-214ENST00000514307 ZNF792Q3KQV3 632 aa17.82■□□□□ 0.44
NUP54-214ENST00000514307 POTEGQ6S5H5 508 aa17.82■□□□□ 0.44
NUP54-214ENST00000514307 DYMQ7RTS9 669 aa17.82■□□□□ 0.44
NUP54-214ENST00000514307 DHX40Q8IX18 779 aaKnown RBP17.82■□□□□ 0.44
NUP54-214ENST00000514307 C4orf19Q8IY42 314 aa17.82■□□□□ 0.44
NUP54-214ENST00000514307 DHTKD1Q96HY7 919 aaPredicted RBP17.82■□□□□ 0.44
NUP54-214ENST00000514307 JPH1Q9HDC5 661 aaPredicted RBP17.82■□□□□ 0.44
NUP54-214ENST00000514307 PANK4Q9NVE7 773 aa17.82■□□□□ 0.44
NUP54-214ENST00000514307 DBR1Q9UK59 544 aaKnown RBP17.82■□□□□ 0.44
NUP54-214ENST00000514307 A0A087WWV3 80 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 PPP1R3GB7ZBB8 358 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 IGF2BP3O00425 579 aaKnown RBP eCLIP17.81■□□□□ 0.44
NUP54-214ENST00000514307 PSMA7O14818 248 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 TLR2O60603 784 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 ADORA2AP29274 412 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 PSMC6P62333 389 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 NOGQ13253 232 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 TPD52L1Q16890 204 aaPredicted RBP17.81■□□□□ 0.44
NUP54-214ENST00000514307 COBLL1Q53SF7 1204 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 SPATA1Q5VX52 437 aa17.81■□□□□ 0.44
NUP54-214ENST00000514307 PAXIP1Q6ZW49 1069 aaPredicted RBP17.81■□□□□ 0.44
NUP54-214ENST00000514307 GPR142Q7Z601 462 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms