RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 CHST13Q8NET6 341 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 RDM1Q8NG50 284 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 GPRASP2Q96D09 838 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 CDCA5Q96FF9 252 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 TAAR1Q96RJ0 339 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 PDCD2LQ9BRP1 358 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 ZNF577Q9BSK1 485 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 AGO4Q9HCK5 861 aaKnown RBP9.32□□□□□ -0.92
RNF4-220ENST00000513578 PXMP2Q9NR77 195 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 PANK4Q9NVE7 773 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 PYCARDQ9ULZ3 195 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 PCDHA2Q9Y5H9 948 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 ZNFX1Q9P2E3 1918 aaKnown RBP9.31□□□□□ -0.92
RNF4-220ENST00000513578 A0A1W2PQC6 194 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 POTEFA5A3E0 1075 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 ADM5C9JUS6 153 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 POTEIP0CG38 1075 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 FCER1AP12319 257 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 GAP43P17677 238 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 TERF1P54274 439 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 PMS1P54277 932 aaKnown RBP9.31□□□□□ -0.92
RNF4-220ENST00000513578 LRMPQ12912 555 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 PPIL2Q13356 520 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 TRIM14Q14142 442 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 GIT2Q14161 759 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 FAM26FQ5R3K3 315 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 ANKRD40Q6AI12 368 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 SNRNP48Q6IEG0 339 aaKnown RBP9.31□□□□□ -0.92
RNF4-220ENST00000513578 POTEGQ6S5H5 508 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 POTEEQ6S8J3 1075 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 DYMQ7RTS9 669 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 PNMA8AQ86V59 439 aaPredicted RBP9.31□□□□□ -0.92
RNF4-220ENST00000513578 VSIG10LQ86VR7 867 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 GPBP1Q86WP2 473 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 ZC3H3Q8IXZ2 948 aaKnown RBP9.31□□□□□ -0.92
RNF4-220ENST00000513578 MYOCDQ8IZQ8 938 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 CCDC51Q96ER9 411 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 TRIM47Q96LD4 638 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 NACC1Q96RE7 527 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 RMDN3Q96TC7 470 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 SENP7Q9BQF6 1050 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 SRRTQ9BXP5 876 aaKnown RBP9.31□□□□□ -0.92
RNF4-220ENST00000513578 SEMA6BQ9H3T3 888 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 UNC45AQ9H3U1 944 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 TAF1DQ9H5J8 278 aaPredicted RBP9.31□□□□□ -0.92
RNF4-220ENST00000513578 ACAD9Q9H845 621 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 GPBP1L1Q9HC44 474 aaPredicted RBP9.31□□□□□ -0.92
RNF4-220ENST00000513578 KCNH7Q9NS40 1196 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 FBXO40Q9UH90 709 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 RIPK3Q9Y572 518 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.31□□□□□ -0.92
RNF4-220ENST00000513578 ARID2Q68CP9 1835 aa9.31□□□□□ -0.92
RNF4-220ENST00000513578 MYH9P35579 1960 aaKnown RBP9.3□□□□□ -0.92
RNF4-220ENST00000513578 TRIM49BA6NDI0 452 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 LGALS16A8MUM7 142 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 P4HBP07237 508 aaKnown RBP9.3□□□□□ -0.92
RNF4-220ENST00000513578 SKILP12757 684 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 PRKCSHP14314 528 aaPredicted RBP9.3□□□□□ -0.92
RNF4-220ENST00000513578 IDEP14735 1019 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 FECHP22830 423 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 CCND2P30279 289 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 SFNP31947 248 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 COPB2P35606 906 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 DNM2P50570 870 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 BAATQ14032 418 aaPredicted RBP9.3□□□□□ -0.92
RNF4-220ENST00000513578 ARID5BQ14865 1188 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 BMT2Q1RMZ1 405 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 ZCWPW2Q504Y3 356 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 LDLRAD1Q5T700 205 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 SLC30A10Q6XR72 485 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 EPM2AIP1Q7L775 607 aaPredicted RBP9.3□□□□□ -0.92
RNF4-220ENST00000513578 ARMC9Q7Z3E5 817 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 NLRX1Q86UT6 975 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 RIOX2Q8IUF8 465 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 CSGALNACT2Q8N6G5 542 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 DNERQ8NFT8 737 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 IL31RAQ8NI17 732 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 ZNF507Q8TCN5 953 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 NSUN6Q8TEA1 469 aaKnown RBP9.3□□□□□ -0.92
RNF4-220ENST00000513578 IQCDQ96DY2 449 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 DYDC2Q96IM9 177 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 WNK4Q96J92 1243 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 CDHR1Q96JP9 859 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 INPP4AQ96PE3 977 aaPredicted RBP9.3□□□□□ -0.92
RNF4-220ENST00000513578 PANX2Q96RD6 677 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 IWS1Q96ST2 819 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 TSG101Q99816 390 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 SLC39A2Q9NP94 309 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 OLFML3Q9NRN5 406 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 CYP39A1Q9NYL5 469 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 MAGEC2Q9UBF1 373 aaPredicted RBP9.3□□□□□ -0.92
RNF4-220ENST00000513578 SEL1LQ9UBV2 794 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 DBR1Q9UK59 544 aaKnown RBP9.3□□□□□ -0.92
RNF4-220ENST00000513578 FZD1Q9UP38 647 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 MAPK8IP1Q9UQF2 711 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 LRRC37A2A6NM11 1700 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 NFASCO94856 1347 aa9.3□□□□□ -0.92
RNF4-220ENST00000513578 N4BP3O15049 544 aa9.29□□□□□ -0.92
RNF4-220ENST00000513578 TEX33O43247 280 aa9.29□□□□□ -0.92
RNF4-220ENST00000513578 CCP110O43303 1012 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms