RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 C19orf67A6NJJ6 358 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 HIP1O00291 1037 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 NOP56O00567 594 aaKnown RBP11.15□□□□□ -0.62
TCOF1-212ENST00000513538 GRM6O15303 877 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 GHRP10912 638 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 GSPT1P15170 499 aaKnown RBP11.15□□□□□ -0.62
TCOF1-212ENST00000513538 GTF2F1P35269 517 aaKnown RBP eCLIP11.15□□□□□ -0.62
TCOF1-212ENST00000513538 ANTXR2P58335 489 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 SP4Q02446 784 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 PTH1RQ03431 593 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 MGAT3Q09327 533 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 PUS10Q3MIT2 529 aaKnown RBP11.15□□□□□ -0.62
TCOF1-212ENST00000513538 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 RPAINQ86UA6 219 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 ALYREFQ86V81 257 aaKnown RBP11.15□□□□□ -0.62
TCOF1-212ENST00000513538 PIBF1Q8WXW3 757 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 USP26Q9BXU7 913 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 EHMT1Q9H9B1 1298 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 CLDND1Q9NY35 253 aa11.15□□□□□ -0.62
TCOF1-212ENST00000513538 ADGRA3Q8IWK6 1321 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 C5orf67F2Z3F1 127 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 IFIT3O14879 490 aaKnown RBP11.14□□□□□ -0.63
TCOF1-212ENST00000513538 FIBPO43427 364 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 DCXO43602 365 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 TBX10O75333 385 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 PDE4AP27815 886 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 CTNNB1P35222 781 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 ARHGAP4P98171 946 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 HYAL1Q12794 435 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 CAMK1Q14012 370 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 NEDD9Q14511 834 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 LPIN1Q14693 890 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 CLUL1Q15846 466 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 CTC1Q2NKJ3 1217 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 GNPTABQ3T906 1256 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 USP17L6PQ6QN14 398 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 EP400NLQ6ZTU2 488 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 LINC01599Q8WXQ3 324 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 APBB2Q92870 758 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 ZBTB10Q96DT7 871 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 UIMC1Q96RL1 719 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 RWDD1Q9H446 243 aaPredicted RBP11.14□□□□□ -0.63
TCOF1-212ENST00000513538 PLXNA4Q9HCM2 1894 aa11.14□□□□□ -0.63
TCOF1-212ENST00000513538 MEIS2O14770 477 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 LINC01565O15544 149 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 ATP9AO75110 1047 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 STAM2O75886 525 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 CSPG5O95196 566 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 ALADP13716 330 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 KCNA2P16389 499 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 IRS1P35568 1242 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 COL9A3Q14050 684 aaPredicted RBP11.13□□□□□ -0.63
TCOF1-212ENST00000513538 MARCH8Q5T0T0 291 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 ADHFE1Q8IWW8 467 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 FIBCD1Q8N539 461 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 EXOC6Q8TAG9 804 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 CLP1Q92989 425 aaKnown RBP11.13□□□□□ -0.63
TCOF1-212ENST00000513538 IL17RAQ96F46 866 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 MYL10Q9BUA6 226 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 PRKAG3Q9UGI9 489 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 ZNF215Q9UL58 517 aaPredicted RBP11.13□□□□□ -0.63
TCOF1-212ENST00000513538 C5orf42Q9H799 3197 aa11.13□□□□□ -0.63
TCOF1-212ENST00000513538 NRCAMQ92823 1304 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 GSTTP1A0A1W2PQM5 241 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 MBLAC1A4D2B0 266 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-212ENST00000513538 E7EWF7 191 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 PIK3CDO00329 1044 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 ENPP3O14638 875 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 MBTPS2O43462 519 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 GNAT1P11488 350 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 TCF7P36402 384 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-212ENST00000513538 BMPR1AP36894 532 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 PPFIA1Q13136 1202 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 WTAPQ15007 396 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 GRIK4Q16099 956 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 FBXO47Q5MNV8 452 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 PCNX4Q63HM2 1172 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 MB21D2Q8IYB1 491 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-212ENST00000513538 CRIPAKQ8N1N5 446 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 IGDCC4Q8TDY8 1250 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 ZNF689Q96CS4 500 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-212ENST00000513538 FBXL18Q96ME1 805 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 SENP7Q9BQF6 1050 aa11.12□□□□□ -0.63
TCOF1-212ENST00000513538 C11orf84Q9BUA3 381 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-212ENST00000513538 AGO3Q9H9G7 860 aaKnown RBP11.12□□□□□ -0.63
TCOF1-212ENST00000513538 DGKIO75912 1065 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 PLEKHA8P1O95397 391 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 RB1P06400 928 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 ITGB5P18084 799 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 DNAJB1P25685 340 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 MARK3P27448 753 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 NHLH1Q02575 133 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 TRDNQ13061 729 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 TRAF1Q13077 416 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 SMAD2Q15796 467 aaKnown RBP11.11□□□□□ -0.63
TCOF1-212ENST00000513538 TTC22Q5TAA0 569 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 TAF2Q6P1X5 1199 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 HFE2Q6ZVN8 426 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 ADGRD2Q7Z7M1 963 aa11.11□□□□□ -0.63
TCOF1-212ENST00000513538 RTN4RL1Q86UN2 441 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms