RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 GH1P01241 217 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 ARP10275 920 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 KCNA2P16389 499 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 SMPD1P17405 629 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 ATP2B1P20020 1258 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 MCM7P33993 719 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 TOB1P50616 345 aaPredicted RBP8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 CALCRLQ16602 461 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 LY6KQ17RY6 165 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 COL13A1Q5TAT6 717 aaPredicted RBP8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 METTL7BQ6UX53 244 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 TLK2Q86UE8 772 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 SLFN12Q8IYM2 578 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 ETNPPLQ8TBG4 499 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 ZDHHC16Q969W1 377 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 EMID1Q96A84 441 aaPredicted RBP8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 EPAS1Q99814 870 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 SDF4Q9BRK5 362 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 ZNF577Q9BSK1 485 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 ADAM33Q9BZ11 813 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 SPC25Q9HBM1 224 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 KCNMB3Q9NPA1 279 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 TCEAL9Q9UHQ7 104 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 ZDHHC9Q9Y397 364 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 Q9Y3F1 56 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 PCDHB6Q9Y5E3 794 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 ATP6V1DQ9Y5K8 247 aa8.58□□□□□ -1.04
HMGXB3-204ENST00000513318 SYNRGQ9UMZ2 1314 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 GAS7O60861 476 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 ATP9AO75110 1047 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 FARP2O94887 1054 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 BAG4O95429 457 aaKnown RBP8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 MYCP01106 439 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 GJB1P08034 283 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 OR52Z1P0C646 297 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 CAPN2P17655 700 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 CST5P28325 142 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 GJA9P57773 515 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 NKX3-2P78367 333 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 SP2Q02086 613 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 LAMC2Q13753 1193 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 CELF3Q5SZQ8 465 aaKnown RBP8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 GJC2Q5T442 439 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 LRCH2Q5VUJ6 765 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 FOXD4L5Q5VV16 416 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 ANO1Q5XXA6 986 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 ATL3Q6DD88 541 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 FAM173BQ6P4H8 233 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 DHX37Q8IY37 1157 aaKnown RBP8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 ZNF687Q8N1G0 1237 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 OR6J1Q8NGC5 347 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 FOXD4L4Q8WXT5 416 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 COPS5Q92905 334 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 SLC5A5Q92911 643 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 LENG1Q96BZ8 264 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 FAM20AQ96MK3 541 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 ZNF396Q96N95 335 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 DEFB118Q96PH6 123 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 RIT2Q99578 217 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 TEKT3Q9BXF9 490 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 AP5M1Q9H0R1 490 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 UPF3AQ9H1J1 476 aaKnown RBP8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 MLXIPQ9HAP2 919 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 JPH1Q9HDC5 661 aaPredicted RBP8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 XPNPEP3Q9NQH7 507 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 TBC1D22BQ9NU19 505 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 CHMP5Q9NZZ3 219 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 PKD2L1Q9P0L9 805 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 SLC9A2Q9UBY0 812 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 CEP131Q9UPN4 1083 aa8.57□□□□□ -1.04
HMGXB3-204ENST00000513318 NOP56O00567 594 aaKnown RBP8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 MARCH6O60337 910 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 ADAMTS4O75173 837 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 PSMD10O75832 226 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 C6orf222P0C671 652 aaPredicted RBP8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 PRPHP41219 470 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 CPT1AP50416 773 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 ATP2C1P98194 919 aaPredicted RBP8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 KRT76Q01546 638 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 ARHGAP1Q07960 439 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 PTGDRQ13258 359 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 ITGB3BPQ13352 177 aaPredicted RBP8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 SF3A1Q15459 793 aaKnown RBP8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 ZNF174Q15697 407 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 TMEM266Q2M3C6 531 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 BRDTQ58F21 947 aaPredicted RBP8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 TMEM63BQ5T3F8 832 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 ZNF746Q6NUN9 644 aaPredicted RBP8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 CYFIP1Q7L576 1253 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 RNF180Q86T96 592 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 ARRDC4Q8NCT1 418 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 PPTC7Q8NI37 304 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 U2AF1L4Q8WU68 220 aaKnown RBP8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 HAS1Q92839 578 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 MTMR9Q96QG7 549 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 USP28Q96RU2 1077 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 TMEM60Q9H2L4 133 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 POLR3EQ9NVU0 708 aa8.56□□□□□ -1.04
HMGXB3-204ENST00000513318 OGDHLQ9ULD0 1010 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms