RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CDC25AP30304 524 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 SFNP31947 248 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 GRK4P32298 578 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 JAK3P52333 1124 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 NCAPH2Q6IBW4 605 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 USP49Q70CQ1 688 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 CTU1Q7Z7A3 348 aaKnown RBP14.1□□□□□ -0.15
PDPN-210ENST00000513143 DHX37Q8IY37 1157 aaKnown RBP14.1□□□□□ -0.15
PDPN-210ENST00000513143 SMAP1Q8IYB5 467 aaPredicted RBP14.1□□□□□ -0.15
PDPN-210ENST00000513143 RDM1Q8NG50 284 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 SYMPKQ92797 1274 aaKnown RBP14.1□□□□□ -0.15
PDPN-210ENST00000513143 COPS5Q92905 334 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 EMID1Q96A84 441 aaPredicted RBP14.1□□□□□ -0.15
PDPN-210ENST00000513143 EPSTI1Q96J88 318 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 MMTAG2Q9BU76 263 aaKnown RBP14.1□□□□□ -0.15
PDPN-210ENST00000513143 CCSER1Q9C0I3 900 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 MLXIPQ9HAP2 919 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 TCEAL9Q9UHQ7 104 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 GNEQ9Y223 722 aaKnown RBP14.1□□□□□ -0.15
PDPN-210ENST00000513143 STK24Q9Y6E0 443 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 MYH9P35579 1960 aaKnown RBP14.1□□□□□ -0.15
PDPN-210ENST00000513143 WDR64B1ANS9 1081 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 ADCY6O43306 1168 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 CHMP2AO43633 222 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 ATG7O95352 703 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 GH1P01241 217 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 AKR1A1P14550 325 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 UBA7P41226 1012 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 ACTR2P61160 394 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 ARHGAP1Q07960 439 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 LAMC2Q13753 1193 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 EPHA7Q15375 998 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 GJC2Q5T442 439 aaPredicted RBP14.09□□□□□ -0.15
PDPN-210ENST00000513143 MIER3Q7Z3K6 550 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 FSIP1Q8NA03 581 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 MRPS27Q92552 414 aaKnown RBP14.09□□□□□ -0.15
PDPN-210ENST00000513143 DISC1Q9NRI5 854 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 HPSEQ9Y251 543 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 Q9Y3F1 56 aa14.09□□□□□ -0.15
PDPN-210ENST00000513143 A0A1B0GVL5 298 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 SEPT4O43236 478 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 SLC26A4O43511 780 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 SORBS3O60504 671 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 INHAP05111 366 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 PTMSP20962 102 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 NFKBIBQ15653 356 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 KRT79Q5XKE5 535 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 ABHD15Q6UXT9 468 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 CABP7Q86V35 215 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 ERMNQ8TAM6 284 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 HSD17B14Q9BPX1 270 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 EIF2AK1Q9BQI3 630 aaKnown RBP14.08□□□□□ -0.16
PDPN-210ENST00000513143 POLR3CQ9BUI4 534 aaPredicted RBP14.08□□□□□ -0.16
PDPN-210ENST00000513143 GOLPH3LQ9H4A5 285 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 FAM13BQ9NYF5 915 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 TELO2Q9Y4R8 837 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 PCDHA10Q9Y5I2 948 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 CENPFP49454 3210 aa14.08□□□□□ -0.16
PDPN-210ENST00000513143 GSTTP1A0A1W2PQM5 241 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 POTEFA5A3E0 1075 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 DUSP11O75319 330 aaKnown RBP14.07□□□□□ -0.16
PDPN-210ENST00000513143 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 PFKFB1P16118 471 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 PTGS1P23219 599 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 RPA1P27694 616 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 CNGA1P29973 690 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 CCND3P30281 292 aaPredicted RBP14.07□□□□□ -0.16
PDPN-210ENST00000513143 TXLNAP40222 546 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 NDUFA8P51970 172 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 SP4Q02446 784 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 PKN2Q16513 984 aaKnown RBP14.07□□□□□ -0.16
PDPN-210ENST00000513143 HSDL1Q3SXM5 330 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 TPRNQ4KMQ1 711 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 HYIQ5T013 277 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 HAUS3Q68CZ6 603 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 PPTC7Q8NI37 304 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 NEK9Q8TD19 979 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 SNX29Q8TEQ0 813 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 SEPT1Q8WYJ6 367 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 SPATA33Q96N06 139 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 GPR20Q99678 358 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 KCNH3Q9ULD8 1083 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 SAMM50Q9Y512 469 aa14.07□□□□□ -0.16
PDPN-210ENST00000513143 IGKV6D-21A0A0A0MT36 114 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 NOP56O00567 594 aaKnown RBP14.06□□□□□ -0.16
PDPN-210ENST00000513143 DYNC1LI2O43237 492 aaPredicted RBP14.06□□□□□ -0.16
PDPN-210ENST00000513143 MED24O75448 989 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 SLITRK3O94933 977 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 P4HBP07237 508 aaKnown RBP14.06□□□□□ -0.16
PDPN-210ENST00000513143 PSAPP07602 524 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 SUPT20HL2P0C7V6 817 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 SPATA31C1P0DKV0 1188 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 LIG1P18858 919 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 MUTP22033 750 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 CCT6AP40227 531 aaKnown RBP14.06□□□□□ -0.16
PDPN-210ENST00000513143 KARSQ15046 597 aaKnown RBP14.06□□□□□ -0.16
PDPN-210ENST00000513143 MIS18BP1Q6P0N0 1132 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 FBXO46Q6PJ61 603 aaPredicted RBP14.06□□□□□ -0.16
PDPN-210ENST00000513143 TLK2Q86UE8 772 aa14.06□□□□□ -0.16
PDPN-210ENST00000513143 CATSPER3Q86XQ3 398 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms