RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 PDPK1O15530 556 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 KNG1P01042 644 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 AMY2AP04746 511 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 C6orf222P0C671 652 aaPredicted RBP3.69□□□□□ -1.82
PDGFC-208ENST00000512711 ZNF20P17024 532 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 AMY2BP19961 511 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 EPHA5P54756 1037 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 PPP2CBP62714 309 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 PPP2CAP67775 309 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 SPIRE1Q08AE8 756 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 NFATC3Q12968 1075 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 KIZQ2M2Z5 673 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 CD276Q5ZPR3 534 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 CYP4F22Q6NT55 531 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 PKN3Q6P5Z2 889 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 BORAQ6PGQ7 559 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 GLB1LQ6UWU2 654 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.69□□□□□ -1.82
PDGFC-208ENST00000512711 SCUBE1Q8IWY4 988 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 TTLL11Q8NHH1 800 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 PCDH19Q8TAB3 1148 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 SAMD11Q96NU1 681 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 TMEM209Q96SK2 561 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 TRIM55Q9BYV6 548 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 PDGFDQ9GZP0 370 aaPredicted RBP3.69□□□□□ -1.82
PDGFC-208ENST00000512711 SLC39A2Q9NP94 309 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 MYRFQ9Y2G1 1151 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 PTPN22Q9Y2R2 807 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 PCDHA9Q9Y5H5 950 aa3.69□□□□□ -1.82
PDGFC-208ENST00000512711 NPEPPSL1A6NEC2 478 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 KCNK3O14649 394 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 LAMTOR5O43504 91 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 AKAP8O43823 692 aaKnown RBP3.68□□□□□ -1.82
PDGFC-208ENST00000512711 MAFKO60675 156 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 STK10O94804 968 aaKnown RBP3.68□□□□□ -1.82
PDGFC-208ENST00000512711 ENO2P09104 434 aaPredicted RBP3.68□□□□□ -1.82
PDGFC-208ENST00000512711 SRGAP2CP0DJJ0 459 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 PYGMP11217 842 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 RBM10P98175 930 aaKnown RBP3.68□□□□□ -1.82
PDGFC-208ENST00000512711 CDSNQ15517 529 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 CPZQ66K79 652 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 VASNQ6EMK4 673 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 ARHGAP36Q6ZRI8 547 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 KCTD1Q719H9 257 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 SPRED1Q7Z699 444 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 LRRC47Q8N1G4 583 aaKnown RBP3.68□□□□□ -1.82
PDGFC-208ENST00000512711 ZBTB38Q8NAP3 1195 aaPredicted RBP3.68□□□□□ -1.82
PDGFC-208ENST00000512711 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.68□□□□□ -1.82
PDGFC-208ENST00000512711 EXOC2Q96KP1 924 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 ZFYVE21Q9BQ24 234 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 TACO1Q9BSH4 297 aaKnown RBP3.68□□□□□ -1.82
PDGFC-208ENST00000512711 C1QTNF3Q9BXJ4 246 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 CCDC113Q9H0I3 377 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 CD248Q9HCU0 757 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 ZFP69BQ9UJL9 534 aa3.68□□□□□ -1.82
PDGFC-208ENST00000512711 TRBV23-1A0A0A0MS06 115 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 FAM47E-STBD1D6RA91 191 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 PDE6AP16499 860 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 TNFRSF1AP19438 455 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 JAM2P57087 298 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 SSRP1Q08945 709 aaKnown RBP3.67□□□□□ -1.82
PDGFC-208ENST00000512711 NOLC1Q14978 699 aaKnown RBP eCLIP3.67□□□□□ -1.82
PDGFC-208ENST00000512711 SEC23AQ15436 765 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 SMAD2Q15796 467 aaKnown RBP3.67□□□□□ -1.82
PDGFC-208ENST00000512711 MTERF2Q49AM1 385 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 BTBD8Q5XKL5 378 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 Q6ZUG5 572 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 GPR155Q7Z3F1 870 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 PTRH1Q86Y79 214 aaKnown RBP3.67□□□□□ -1.82
PDGFC-208ENST00000512711 CKAP2LQ8IYA6 745 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 KLHL36Q8N4N3 616 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 DNERQ8NFT8 737 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 PTPRN2Q92932 1015 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 GNRHR2Q96P88 292 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 DLL4Q9NR61 685 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 KCND1Q9NSA2 647 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 ARHGAP20Q9P2F6 1191 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 PPP1R1BQ9UD71 204 aaPredicted RBP3.67□□□□□ -1.82
PDGFC-208ENST00000512711 FTSJ1Q9UET6 329 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 ADAM29Q9UKF5 820 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 CBLCQ9ULV8 474 aa3.67□□□□□ -1.82
PDGFC-208ENST00000512711 ZNF839A8K0R7 811 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 MAN2B1O00754 1011 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 MATN3O15232 486 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 CYP7B1O75881 506 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 CNOT4O95628 575 aaKnown RBP3.66□□□□□ -1.82
PDGFC-208ENST00000512711 ZNF888P0CJ79 500 aaPredicted RBP3.66□□□□□ -1.82
PDGFC-208ENST00000512711 KRT15P19012 456 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 ATP2B1P20020 1258 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 GTF2F1P35269 517 aaKnown RBP eCLIP3.66□□□□□ -1.82
PDGFC-208ENST00000512711 EPHB4P54760 987 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 ZC3H6P61129 1189 aaKnown RBP3.66□□□□□ -1.82
PDGFC-208ENST00000512711 GUCY1A3Q02108 690 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 DBPQ10586 325 aaPredicted RBP3.66□□□□□ -1.82
PDGFC-208ENST00000512711 PAK1Q13153 545 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 RASGRF1Q13972 1273 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 ZNF585AQ6P3V2 769 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 ARHGEF18Q6ZSZ5 1173 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 CHST13Q8NET6 341 aa3.66□□□□□ -1.82
PDGFC-208ENST00000512711 ZNF669Q96BR6 464 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms