RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 RRP36Q96EU6 259 aaKnown RBP16.74■□□□□ 0.27
LETM1-207ENST00000512669 YME1L1Q96TA2 773 aa16.74■□□□□ 0.27
LETM1-207ENST00000512669 LZTS2Q9BRK4 669 aa16.74■□□□□ 0.27
LETM1-207ENST00000512669 C16orf70Q9BSU1 422 aa16.74■□□□□ 0.27
LETM1-207ENST00000512669 TUT1Q9H6E5 874 aaKnown RBP16.74■□□□□ 0.27
LETM1-207ENST00000512669 BCAS3Q9H6U6 928 aa16.74■□□□□ 0.27
LETM1-207ENST00000512669 C11orf16Q9NQ32 467 aa16.74■□□□□ 0.27
LETM1-207ENST00000512669 SLC12A7Q9Y666 1083 aa16.74■□□□□ 0.27
LETM1-207ENST00000512669 FRMPD4Q14CM0 1322 aa16.73■□□□□ 0.27
LETM1-207ENST00000512669 MEIS2O14770 477 aa16.73■□□□□ 0.27
LETM1-207ENST00000512669 MRPS9P82933 396 aaKnown RBP16.73■□□□□ 0.27
LETM1-207ENST00000512669 ZNF200P98182 395 aaPredicted RBP16.73■□□□□ 0.27
LETM1-207ENST00000512669 SP2Q02086 613 aa16.73■□□□□ 0.27
LETM1-207ENST00000512669 FUT2Q10981 343 aa16.73■□□□□ 0.27
LETM1-207ENST00000512669 PTCRAQ6ISU1 281 aaPredicted RBP16.73■□□□□ 0.27
LETM1-207ENST00000512669 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.73■□□□□ 0.276e-9■■■■■ 61.3
LETM1-207ENST00000512669 TMTC3Q6ZXV5 915 aa16.73■□□□□ 0.27
LETM1-207ENST00000512669 CCDC82Q8N4S0 544 aa16.73■□□□□ 0.27
LETM1-207ENST00000512669 C17orf80Q9BSJ5 609 aa16.73■□□□□ 0.27
LETM1-207ENST00000512669 USP26Q9BXU7 913 aa16.73■□□□□ 0.27
LETM1-207ENST00000512669 FAM217BQ9NTX9 383 aaPredicted RBP16.73■□□□□ 0.27
LETM1-207ENST00000512669 NOP56O00567 594 aaKnown RBP16.72■□□□□ 0.27
LETM1-207ENST00000512669 NCK2O43639 380 aa16.72■□□□□ 0.27
LETM1-207ENST00000512669 CALM1P0DP23 149 aa16.72■□□□□ 0.27
LETM1-207ENST00000512669 CALM2P0DP24 149 aa16.72■□□□□ 0.27
LETM1-207ENST00000512669 CALM3P0DP25 149 aa16.72■□□□□ 0.27
LETM1-207ENST00000512669 SSTR3P32745 418 aaPredicted RBP16.72■□□□□ 0.27
LETM1-207ENST00000512669 HSPA4P34932 840 aa16.72■□□□□ 0.27
LETM1-207ENST00000512669 GNAQP50148 359 aa16.72■□□□□ 0.27
LETM1-207ENST00000512669 NEDD9Q14511 834 aa16.72■□□□□ 0.27
LETM1-207ENST00000512669 EPC2Q52LR7 807 aa16.72■□□□□ 0.27
LETM1-207ENST00000512669 APOA5Q6Q788 366 aa16.72■□□□□ 0.27
LETM1-207ENST00000512669 USP17L6PQ6QN14 398 aa16.72■□□□□ 0.27
LETM1-207ENST00000512669 MICU3Q86XE3 530 aa16.72■□□□□ 0.27
LETM1-207ENST00000512669 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.72■□□□□ 0.27
LETM1-207ENST00000512669 NEK9Q8TD19 979 aa16.72■□□□□ 0.27
LETM1-207ENST00000512669 KHSRPQ92945 711 aaKnown RBP eCLIP16.72■□□□□ 0.27
LETM1-207ENST00000512669 TOP1MTQ969P6 601 aa16.72■□□□□ 0.27
LETM1-207ENST00000512669 SNX14Q9Y5W7 946 aa16.72■□□□□ 0.27
LETM1-207ENST00000512669 RALGAPA2Q2PPJ7 1873 aa16.71■□□□□ 0.27
LETM1-207ENST00000512669 GRXCR2A6NFK2 248 aa16.71■□□□□ 0.27
LETM1-207ENST00000512669 H3BNC9 293 aa16.71■□□□□ 0.27
LETM1-207ENST00000512669 LGALS2P05162 132 aa16.71■□□□□ 0.27
LETM1-207ENST00000512669 SMIM10L2AP0DMW4 78 aa16.71■□□□□ 0.27
LETM1-207ENST00000512669 SMIM10L2BP0DMW5 78 aa16.71■□□□□ 0.27
LETM1-207ENST00000512669 SEMA3FQ13275 785 aa16.71■□□□□ 0.27
LETM1-207ENST00000512669 METTL7BQ6UX53 244 aa16.71■□□□□ 0.27
LETM1-207ENST00000512669 BANK1Q8NDB2 785 aa16.71■□□□□ 0.27
LETM1-207ENST00000512669 PABPC5Q96DU9 382 aaKnown RBP16.71■□□□□ 0.27
LETM1-207ENST00000512669 CD320Q9NPF0 282 aa16.71■□□□□ 0.27
LETM1-207ENST00000512669 PRKAG3Q9UGI9 489 aa16.71■□□□□ 0.27
LETM1-207ENST00000512669 ZNF215Q9UL58 517 aaPredicted RBP16.71■□□□□ 0.27
LETM1-207ENST00000512669 RWDD3Q9Y3V2 267 aa16.71■□□□□ 0.27
LETM1-207ENST00000512669 FAM86C2PA6NEL3 165 aa16.7■□□□□ 0.26
LETM1-207ENST00000512669 RBAK-RBAKDNI3L0D1 243 aa16.7■□□□□ 0.26
LETM1-207ENST00000512669 PIK3CDO00329 1044 aa16.7■□□□□ 0.26
LETM1-207ENST00000512669 SORBS3O60504 671 aa16.7■□□□□ 0.26
LETM1-207ENST00000512669 ICAM3P32942 547 aa16.7■□□□□ 0.26
LETM1-207ENST00000512669 GPM6BQ13491 265 aa16.7■□□□□ 0.26
LETM1-207ENST00000512669 HIC1Q14526 733 aa16.7■□□□□ 0.26
LETM1-207ENST00000512669 CSPP1Q1MSJ5 1256 aa16.7■□□□□ 0.26
LETM1-207ENST00000512669 NSUN3Q9H649 340 aaKnown RBP16.7■□□□□ 0.26
LETM1-207ENST00000512669 CNTNAP5Q8WYK1 1306 aa16.7■□□□□ 0.26
LETM1-207ENST00000512669 NLRC5Q86WI3 1866 aa16.69■□□□□ 0.26
LETM1-207ENST00000512669 IL9P15248 144 aa16.69■□□□□ 0.26
LETM1-207ENST00000512669 CDC27P30260 824 aa16.69■□□□□ 0.26
LETM1-207ENST00000512669 KRT32Q14532 448 aa16.69■□□□□ 0.26
LETM1-207ENST00000512669 COL19A1Q14993 1142 aa16.69■□□□□ 0.26
LETM1-207ENST00000512669 TYW1BQ6NUM6 668 aa16.69■□□□□ 0.26
LETM1-207ENST00000512669 TMEM192Q8IY95 271 aa16.69■□□□□ 0.26
LETM1-207ENST00000512669 INPP4AQ96PE3 977 aaPredicted RBP16.69■□□□□ 0.26
LETM1-207ENST00000512669 IFIH1Q9BYX4 1025 aaKnown RBP16.69■□□□□ 0.26
LETM1-207ENST00000512669 LMAN2LQ9H0V9 348 aa16.69■□□□□ 0.26
LETM1-207ENST00000512669 KCNH6Q9H252 994 aa16.69■□□□□ 0.26
LETM1-207ENST00000512669 RNPEPQ9H4A4 650 aa16.69■□□□□ 0.26
LETM1-207ENST00000512669 RTEL1Q9NZ71 1219 aa16.69■□□□□ 0.26
LETM1-207ENST00000512669 SEC63Q9UGP8 760 aaKnown RBP16.69■□□□□ 0.26
LETM1-207ENST00000512669 TELO2Q9Y4R8 837 aa16.69■□□□□ 0.26
LETM1-207ENST00000512669 TREHO43280 583 aa16.68■□□□□ 0.26
LETM1-207ENST00000512669 FIBPO43427 364 aa16.68■□□□□ 0.26
LETM1-207ENST00000512669 RB1P06400 928 aa16.68■□□□□ 0.26
LETM1-207ENST00000512669 FAM26DQ5JW98 314 aa16.68■□□□□ 0.26
LETM1-207ENST00000512669 XRRA1Q6P2D8 792 aa16.68■□□□□ 0.26
LETM1-207ENST00000512669 JAKMIP1Q96N16 626 aaKnown RBP16.68■□□□□ 0.26
LETM1-207ENST00000512669 PSTPIP2Q9H939 334 aa16.68■□□□□ 0.26
LETM1-207ENST00000512669 KLF18A0A0U1RQI7 1052 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 SPATA31C2B4DYI2 1134 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 ZBTB43O43298 467 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 DCXO43602 365 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 CTSHP09668 335 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 UBE2SQ16763 222 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 TCEAL5Q5H9L2 206 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 WWC2Q6AWC2 1192 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 SYNE3Q6ZMZ3 975 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 Q6ZUG5 572 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 GIMAP8Q8ND71 665 aaPredicted RBP16.67■□□□□ 0.26
LETM1-207ENST00000512669 SMARCC2Q8TAQ2 1214 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 IL17RAQ96F46 866 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 SENP7Q9BQF6 1050 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 C11orf84Q9BUA3 381 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms