RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 TRAF1Q13077 416 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 ADAM9Q13443 819 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 HSP90B2PQ58FF3 399 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 POTEBQ6S5H4 581 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 CCNI2Q6ZMN8 369 aaPredicted RBP10.19□□□□□ -0.78
CPNE4-210ENST00000512332 SH3BP5LQ7L8J4 393 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 FRMD5Q7Z6J6 570 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 FBXO11Q86XK2 927 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 CATSPER3Q86XQ3 398 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 COL23A1Q86Y22 540 aaPredicted RBP10.19□□□□□ -0.78
CPNE4-210ENST00000512332 CAGE1Q8TC20 777 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 LENG9Q96B70 501 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 NOX5Q96PH1 765 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 DNM3Q9UQ16 869 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 HYOU1Q9Y4L1 999 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 COL2A1P02458 1487 aaPredicted RBP10.19□□□□□ -0.78
CPNE4-210ENST00000512332 LRRIQ3A6PVS8 624 aaPredicted RBP10.19□□□□□ -0.78
CPNE4-210ENST00000512332 PIK3CDO00329 1044 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 SPATA31C1P0DKV0 1188 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 GIT2Q14161 759 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 BMT2Q1RMZ1 405 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 EPM2AIP1Q7L775 607 aaPredicted RBP10.19□□□□□ -0.78
CPNE4-210ENST00000512332 COG1Q8WTW3 980 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 CAPZA3Q96KX2 299 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 TRIM34Q9BYJ4 488 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 ADAMTSL1Q8N6G6 1762 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 SPDYE3A6NKU9 549 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 PDXKO00764 312 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 ZNF185O15231 689 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 TLR2O60603 784 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 MOCS3O95396 460 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 TCP10Q12799 353 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 ABCB5Q2M3G0 1257 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 SYDE2Q5VT97 1194 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 STYK1Q6J9G0 422 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 KIAA0825Q8IV33 1275 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 SPATA4Q8NEY3 305 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 SMCR8Q8TEV9 937 aaPredicted RBP10.18□□□□□ -0.78
CPNE4-210ENST00000512332 OSBPL9Q96SU4 736 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 P2RX7Q99572 595 aaKnown RBP10.18□□□□□ -0.78
CPNE4-210ENST00000512332 POLR3CQ9BUI4 534 aaPredicted RBP10.18□□□□□ -0.78
CPNE4-210ENST00000512332 FGFBP2Q9BYJ0 223 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 DBNDD1Q9H9R9 158 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 MLXIPQ9HAP2 919 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 PLCB1Q9NQ66 1216 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 BTNL10A8MVZ5 291 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 NDUFB10O96000 172 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 KRT18P05783 430 aaKnown RBP10.18□□□□□ -0.78
CPNE4-210ENST00000512332 GFPT1Q06210 699 aaPredicted RBP10.18□□□□□ -0.78
CPNE4-210ENST00000512332 NAB2Q15742 525 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 SLC18A3Q16572 532 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 KNOP1Q1ED39 458 aaKnown RBP10.18□□□□□ -0.78
CPNE4-210ENST00000512332 GLE1Q53GS7 698 aaKnown RBP10.18□□□□□ -0.78
CPNE4-210ENST00000512332 PRR16Q569H4 304 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 MUM1L1Q5H9M0 696 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 C10orf76Q5T2E6 689 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 KCNQ5Q9NR82 932 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 FBXL5Q9UKA1 691 aa10.18□□□□□ -0.78
CPNE4-210ENST00000512332 BZW2Q9Y6E2 419 aaKnown RBP10.18□□□□□ -0.78
CPNE4-210ENST00000512332 NPHP3-ACAD11A0A0J9YXS1 232 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 POTEFA5A3E0 1075 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 FAM86B1E9PN63 330 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 MMP10P09238 476 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 FAM86B2P0C5J1 330 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 POTEIP0CG38 1075 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 SLURP2P0DP57 97 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 BMP3P12645 472 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 ANXA13P27216 316 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 STAT3P40763 770 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 POLR2FP61218 127 aaKnown RBP10.17□□□□□ -0.78
CPNE4-210ENST00000512332 POTEGQ6S5H5 508 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 POTEEQ6S8J3 1075 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 NELFCDQ8IXH7 590 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 LSM14BQ9BX40 385 aaKnown RBP10.17□□□□□ -0.78
CPNE4-210ENST00000512332 TLR10Q9BXR5 811 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 GANQ9H2C0 597 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 NLRC4Q9NPP4 1024 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 TBC1D7Q9P0N9 293 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 SALL4Q9UJQ4 1053 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 VAV3Q9UKW4 847 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 COL11A2P13942 1736 aaPredicted RBP10.17□□□□□ -0.78
CPNE4-210ENST00000512332 ATP8B3O60423 1300 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 ERICH4A6NGS2 130 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 ECE2O60344 883 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 NR2F2P24468 414 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 PAFAH1B1P43034 410 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 RBM5P52756 815 aaKnown RBP eCLIP10.17□□□□□ -0.78
CPNE4-210ENST00000512332 CACNB3P54284 484 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 RASSF7Q02833 373 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 KCNH2Q12809 1159 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 SLC15A2Q16348 729 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 TDRD12Q587J7 1177 aaKnown RBP10.17□□□□□ -0.78
CPNE4-210ENST00000512332 KLHDC7AQ5VTJ3 777 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 DPY19L2P1Q6NXN4 242 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 AENQ8WTP8 325 aaKnown RBP10.17□□□□□ -0.78
CPNE4-210ENST00000512332 METTL14Q9HCE5 456 aaKnown RBP10.17□□□□□ -0.78
CPNE4-210ENST00000512332 OLFML3Q9NRN5 406 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 VPS18Q9P253 973 aa10.17□□□□□ -0.78
CPNE4-210ENST00000512332 ARMCX3Q9UH62 379 aaPredicted RBP10.17□□□□□ -0.78
CPNE4-210ENST00000512332 HPCAL4Q9UM19 191 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms