RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 KCNH5Q8NCM2 988 aa7.75□□□□□ -1.17
GYPB-212ENST00000511198 TMEM52Q8NDY8 209 aa7.75□□□□□ -1.17
GYPB-212ENST00000511198 KCNN1Q92952 543 aa7.75□□□□□ -1.17
GYPB-212ENST00000511198 CRBNQ96SW2 442 aa7.75□□□□□ -1.17
GYPB-212ENST00000511198 CDADC1Q9BWV3 514 aa7.75□□□□□ -1.17
GYPB-212ENST00000511198 SLC12A9Q9BXP2 914 aa7.75□□□□□ -1.17
GYPB-212ENST00000511198 CRTAC1Q9NQ79 661 aa7.75□□□□□ -1.17
GYPB-212ENST00000511198 AP5S1Q9NUS5 200 aa7.75□□□□□ -1.17
GYPB-212ENST00000511198 GPR55Q9Y2T6 319 aaPredicted RBP7.75□□□□□ -1.17
GYPB-212ENST00000511198 MAP2P11137 1827 aaKnown RBP7.75□□□□□ -1.17
GYPB-212ENST00000511198 H0Y8X5 98 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 H0YGN5 161 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 CBFA2T2O43439 604 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 PEX10O60683 326 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 ENDOUP21128 410 aaKnown RBP7.74□□□□□ -1.17
GYPB-212ENST00000511198 PDE6BP35913 854 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 KIR3DS1Q14943 382 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 HSF5Q4G112 596 aaPredicted RBP7.74□□□□□ -1.17
GYPB-212ENST00000511198 ATG14Q6ZNE5 492 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 SLCO6A1Q86UG4 719 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 C19orf47Q8N9M1 422 aaKnown RBP7.74□□□□□ -1.17
GYPB-212ENST00000511198 ZCRB1Q8TBF4 217 aaKnown RBP7.74□□□□□ -1.17
GYPB-212ENST00000511198 BRF1Q92994 677 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 SHDQ96IW2 340 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 SRRTQ9BXP5 876 aaKnown RBP7.74□□□□□ -1.17
GYPB-212ENST00000511198 TGIF2Q9GZN2 237 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 ACBD3Q9H3P7 528 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 HACL1Q9UJ83 578 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 FHOD1Q9Y613 1164 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 MUC3AQ02505 3323 aa7.74□□□□□ -1.17
GYPB-212ENST00000511198 TRPM7Q96QT4 1865 aa7.73□□□□□ -1.17
GYPB-212ENST00000511198 A0A1W2PQH9 124 aa7.73□□□□□ -1.17
GYPB-212ENST00000511198 PNLIPP16233 465 aa7.73□□□□□ -1.17
GYPB-212ENST00000511198 NASPP49321 788 aaPredicted RBP7.73□□□□□ -1.17
GYPB-212ENST00000511198 NOL9Q5SY16 702 aaKnown RBP7.73□□□□□ -1.17
GYPB-212ENST00000511198 SPOCD1Q6ZMY3 1216 aa7.73□□□□□ -1.17
GYPB-212ENST00000511198 TTLL6Q8N841 843 aa7.73□□□□□ -1.17
GYPB-212ENST00000511198 OR6P1Q8NGX9 317 aa7.73□□□□□ -1.17
GYPB-212ENST00000511198 FAM122AQ96E09 287 aa7.73□□□□□ -1.17
GYPB-212ENST00000511198 TOX2Q96NM4 488 aa7.73□□□□□ -1.17
GYPB-212ENST00000511198 RNF186Q9NXI6 227 aa7.73□□□□□ -1.17
GYPB-212ENST00000511198 CENPFP49454 3210 aa7.73□□□□□ -1.17
GYPB-212ENST00000511198 WTIPA6NIX2 430 aaPredicted RBP7.72□□□□□ -1.17
GYPB-212ENST00000511198 PKN2Q16513 984 aaKnown RBP7.72□□□□□ -1.17
GYPB-212ENST00000511198 ADGRF1Q5T601 910 aa7.72□□□□□ -1.17
GYPB-212ENST00000511198 GALNT18Q6P9A2 607 aa7.72□□□□□ -1.17
GYPB-212ENST00000511198 PNMA8AQ86V59 439 aaPredicted RBP7.72□□□□□ -1.17
GYPB-212ENST00000511198 FIBCD1Q8N539 461 aa7.72□□□□□ -1.17
GYPB-212ENST00000511198 SEC16BQ96JE7 1060 aa7.72□□□□□ -1.17
GYPB-212ENST00000511198 GCM1Q9NP62 436 aa7.72□□□□□ -1.17
GYPB-212ENST00000511198 SAGE1Q9NXZ1 904 aa7.72□□□□□ -1.17
GYPB-212ENST00000511198 PCDHB10Q9UN67 800 aa7.72□□□□□ -1.17
GYPB-212ENST00000511198 HTTP42858 3142 aa7.72□□□□□ -1.17
GYPB-212ENST00000511198 FER1L6Q2WGJ9 1857 aa7.72□□□□□ -1.17
GYPB-212ENST00000511198 SCN11AQ9UI33 1791 aa7.71□□□□□ -1.17
GYPB-212ENST00000511198 A0A087WZG4 1122 aa7.71□□□□□ -1.18
GYPB-212ENST00000511198 TEX51A0A1B0GUA7 166 aa7.71□□□□□ -1.18
GYPB-212ENST00000511198 A0A1W2PQ45 241 aaPredicted RBP7.71□□□□□ -1.18
GYPB-212ENST00000511198 A0A1W2PQY0 241 aa7.71□□□□□ -1.18
GYPB-212ENST00000511198 OR14I1A6ND48 311 aa7.71□□□□□ -1.18
GYPB-212ENST00000511198 NPIPB6E9PJ23 425 aa7.71□□□□□ -1.18
GYPB-212ENST00000511198 LRRC56Q8IYG6 542 aaPredicted RBP7.71□□□□□ -1.18
GYPB-212ENST00000511198 HAUS7Q99871 368 aa7.71□□□□□ -1.18
GYPB-212ENST00000511198 PHAXQ9H814 394 aaKnown RBP7.71□□□□□ -1.18
GYPB-212ENST00000511198 SMG5Q9UPR3 1016 aaKnown RBP7.71□□□□□ -1.18
GYPB-212ENST00000511198 SLC12A7Q9Y666 1083 aa7.71□□□□□ -1.18
GYPB-212ENST00000511198 ZNF541Q9H0D2 1346 aa7.71□□□□□ -1.18
GYPB-212ENST00000511198 DLEC1Q9Y238 1755 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 TCAF2A6NFQ2 919 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 SEMA7AO75326 666 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 GSTM1P09488 218 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 ITGA4P13612 1032 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 SDHBP21912 280 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 DLG4P78352 724 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 NOGQ13253 232 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 KCNA10Q16322 511 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 KRTAP19-4Q3LI73 84 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 GNPTABQ3T906 1256 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 CWF19L1Q69YN2 538 aaKnown RBP7.7□□□□□ -1.18
GYPB-212ENST00000511198 SYNE4Q8N205 404 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 KLHL6Q8WZ60 621 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 PIGBQ92521 554 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 FCRL3Q96P31 734 aaPredicted RBP7.7□□□□□ -1.18
GYPB-212ENST00000511198 JMJD8Q96S16 334 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 KLHL25Q9H0H3 589 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 ACSL6Q9UKU0 697 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 RNF123Q5XPI4 1314 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 INSRP06213 1382 aa7.7□□□□□ -1.18
GYPB-212ENST00000511198 LAMB4A4D0S4 1761 aa7.69□□□□□ -1.18
GYPB-212ENST00000511198 PAPPA2Q9BXP8 1791 aa7.69□□□□□ -1.18
GYPB-212ENST00000511198 HRKO00198 91 aa7.69□□□□□ -1.18
GYPB-212ENST00000511198 POLRMTO00411 1230 aaKnown RBP7.69□□□□□ -1.18
GYPB-212ENST00000511198 EN2P19622 333 aaPredicted RBP7.69□□□□□ -1.18
GYPB-212ENST00000511198 TM4SF1P30408 202 aa7.69□□□□□ -1.18
GYPB-212ENST00000511198 RFC4P35249 363 aa7.69□□□□□ -1.18
GYPB-212ENST00000511198 ERVFRD-1P60508 538 aa7.69□□□□□ -1.18
GYPB-212ENST00000511198 YBX1P67809 324 aaKnown RBP7.69□□□□□ -1.18
GYPB-212ENST00000511198 TCEAL1Q15170 157 aa7.69□□□□□ -1.18
GYPB-212ENST00000511198 LCNL1Q6ZST4 164 aa7.69□□□□□ -1.18
GYPB-212ENST00000511198 FAM169BQ8N8A8 192 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms