RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 FAM122AQ96E09 287 aa26.33■■□□□ 1.81
SMAD5-207ENST00000511116 RRP36Q96EU6 259 aaKnown RBP26.33■■□□□ 1.81
SMAD5-207ENST00000511116 YME1L1Q96TA2 773 aa26.33■■□□□ 1.81
SMAD5-207ENST00000511116 MYO7AQ13402 2215 aa26.33■■□□□ 1.8
SMAD5-207ENST00000511116 KCNA5P22460 613 aa26.32■■□□□ 1.8
SMAD5-207ENST00000511116 TIGD5Q53EQ6 642 aa26.32■■□□□ 1.8
SMAD5-207ENST00000511116 TMEM192Q8IY95 271 aa26.32■■□□□ 1.8
SMAD5-207ENST00000511116 SMARCC2Q8TAQ2 1214 aa26.32■■□□□ 1.8
SMAD5-207ENST00000511116 GPRASP2Q96D09 838 aa26.32■■□□□ 1.8
SMAD5-207ENST00000511116 LZTS2Q9BRK4 669 aa26.32■■□□□ 1.8
SMAD5-207ENST00000511116 IFIH1Q9BYX4 1025 aaKnown RBP26.32■■□□□ 1.8
SMAD5-207ENST00000511116 EHMT1Q9H9B1 1298 aa26.32■■□□□ 1.8
SMAD5-207ENST00000511116 CHRNA1P02708 482 aa26.31■■□□□ 1.8
SMAD5-207ENST00000511116 LINC00271P0C7V0 271 aa26.31■■□□□ 1.8
SMAD5-207ENST00000511116 KIF5BP33176 963 aa26.31■■□□□ 1.8
SMAD5-207ENST00000511116 ARHGAP4P98171 946 aa26.31■■□□□ 1.8
SMAD5-207ENST00000511116 NLRX1Q86UT6 975 aa26.31■■□□□ 1.8
SMAD5-207ENST00000511116 CTCFLQ8NI51 663 aaPredicted RBP26.31■■□□□ 1.8
SMAD5-207ENST00000511116 PIBF1Q8WXW3 757 aa26.31■■□□□ 1.8
SMAD5-207ENST00000511116 CUL5Q93034 780 aa26.31■■□□□ 1.8
SMAD5-207ENST00000511116 KCNA2P16389 499 aa26.3■■□□□ 1.8
SMAD5-207ENST00000511116 MGAT3Q09327 533 aa26.3■■□□□ 1.8
SMAD5-207ENST00000511116 UTP14CQ5TAP6 766 aaKnown RBP26.3■■□□□ 1.8
SMAD5-207ENST00000511116 TAF2Q6P1X5 1199 aa26.3■■□□□ 1.8
SMAD5-207ENST00000511116 RC3H2Q9HBD1 1191 aaKnown RBP26.3■■□□□ 1.8
SMAD5-207ENST00000511116 GRXCR2A6NFK2 248 aa26.29■■□□□ 1.8
SMAD5-207ENST00000511116 C5orf67F2Z3F1 127 aa26.29■■□□□ 1.8
SMAD5-207ENST00000511116 ATP9AO75110 1047 aa26.29■■□□□ 1.8
SMAD5-207ENST00000511116 TCF7P36402 384 aaPredicted RBP26.29■■□□□ 1.8
SMAD5-207ENST00000511116 GPM6BQ13491 265 aa26.29■■□□□ 1.8
SMAD5-207ENST00000511116 PUS10Q3MIT2 529 aaKnown RBP26.29■■□□□ 1.8
SMAD5-207ENST00000511116 SRBD1Q8N5C6 995 aaKnown RBP26.29■■□□□ 1.8
SMAD5-207ENST00000511116 BANK1Q8NDB2 785 aa26.29■■□□□ 1.8
SMAD5-207ENST00000511116 CDHR1Q96JP9 859 aa26.29■■□□□ 1.8
SMAD5-207ENST00000511116 MYL10Q9BUA6 226 aa26.29■■□□□ 1.8
SMAD5-207ENST00000511116 RBM8AQ9Y5S9 174 aaKnown RBP26.29■■□□□ 1.8
SMAD5-207ENST00000511116 ATG2AQ2TAZ0 1938 aa26.28■■□□□ 1.8
SMAD5-207ENST00000511116 TTC3P53804 2025 aa26.28■■□□□ 1.8
SMAD5-207ENST00000511116 MBLAC1A4D2B0 266 aaPredicted RBP26.28■■□□□ 1.8
SMAD5-207ENST00000511116 UPP2O95045 317 aa26.28■■□□□ 1.8
SMAD5-207ENST00000511116 IL9P15248 144 aa26.28■■□□□ 1.8
SMAD5-207ENST00000511116 ITGB5P18084 799 aa26.28■■□□□ 1.8
SMAD5-207ENST00000511116 GNAQP50148 359 aa26.28■■□□□ 1.8
SMAD5-207ENST00000511116 PTCRAQ6ISU1 281 aaPredicted RBP26.28■■□□□ 1.8
SMAD5-207ENST00000511116 RUFY4Q6ZNE9 571 aa26.28■■□□□ 1.8
SMAD5-207ENST00000511116 GJD3Q8N144 294 aa26.28■■□□□ 1.8
SMAD5-207ENST00000511116 PABPC5Q96DU9 382 aaKnown RBP26.28■■□□□ 1.8
SMAD5-207ENST00000511116 SEC63Q9UGP8 760 aaKnown RBP26.28■■□□□ 1.8
SMAD5-207ENST00000511116 PIEZO1Q92508 2521 aa26.27■■□□□ 1.8
SMAD5-207ENST00000511116 GSTTP1A0A1W2PQM5 241 aa26.27■■□□□ 1.8
SMAD5-207ENST00000511116 PLEKHA8P1O95397 391 aa26.27■■□□□ 1.8
SMAD5-207ENST00000511116 TMTC2Q8N394 836 aa26.27■■□□□ 1.8
SMAD5-207ENST00000511116 HCN4Q9Y3Q4 1203 aa26.27■■□□□ 1.8
SMAD5-207ENST00000511116 SUPT16HQ9Y5B9 1047 aaKnown RBP26.27■■□□□ 1.8
SMAD5-207ENST00000511116 UBIAD1Q9Y5Z9 338 aa26.27■■□□□ 1.8
SMAD5-207ENST00000511116 SH2B2O14492 632 aaPredicted RBP26.26■■□□□ 1.79
SMAD5-207ENST00000511116 HOXD11P31277 338 aaPredicted RBP26.26■■□□□ 1.79
SMAD5-207ENST00000511116 SP4Q02446 784 aa26.26■■□□□ 1.79
SMAD5-207ENST00000511116 LPIN1Q14693 890 aa26.26■■□□□ 1.79
SMAD5-207ENST00000511116 TCEAL5Q5H9L2 206 aa26.26■■□□□ 1.79
SMAD5-207ENST00000511116 MARCH8Q5T0T0 291 aa26.26■■□□□ 1.79
SMAD5-207ENST00000511116 SEPT1Q8WYJ6 367 aa26.26■■□□□ 1.79
SMAD5-207ENST00000511116 IL17RAQ96F46 866 aa26.26■■□□□ 1.79
SMAD5-207ENST00000511116 TMEM87BQ96K49 555 aa26.26■■□□□ 1.79
SMAD5-207ENST00000511116 NSUN3Q9H649 340 aaKnown RBP26.26■■□□□ 1.79
SMAD5-207ENST00000511116 PSTPIP2Q9H939 334 aa26.26■■□□□ 1.79
SMAD5-207ENST00000511116 MUC6Q6W4X9 2439 aa26.26■■□□□ 1.79
SMAD5-207ENST00000511116 PRC1O43663 620 aa26.25■■□□□ 1.79
SMAD5-207ENST00000511116 RB1P06400 928 aa26.25■■□□□ 1.79
SMAD5-207ENST00000511116 LIFRP42702 1097 aa26.25■■□□□ 1.79
SMAD5-207ENST00000511116 PPFIA1Q13136 1202 aa26.25■■□□□ 1.79
SMAD5-207ENST00000511116 COL9A3Q14050 684 aaPredicted RBP26.25■■□□□ 1.79
SMAD5-207ENST00000511116 CASC1Q6TDU7 716 aa26.25■■□□□ 1.79
SMAD5-207ENST00000511116 CLP1Q92989 425 aaKnown RBP26.25■■□□□ 1.79
SMAD5-207ENST00000511116 YTHDC1Q96MU7 727 aaKnown RBP26.25■■□□□ 1.79
SMAD5-207ENST00000511116 ERAP1Q9NZ08 941 aa26.25■■□□□ 1.79
SMAD5-207ENST00000511116 MAFGO15525 162 aa26.24■■□□□ 1.79
SMAD5-207ENST00000511116 GHRP10912 638 aa26.24■■□□□ 1.79
SMAD5-207ENST00000511116 MCM5P33992 734 aa26.24■■□□□ 1.79
SMAD5-207ENST00000511116 GRIK4Q16099 956 aa26.24■■□□□ 1.79
SMAD5-207ENST00000511116 FIBCD1Q8N539 461 aa26.24■■□□□ 1.79
SMAD5-207ENST00000511116 ZNF689Q96CS4 500 aaPredicted RBP26.24■■□□□ 1.79
SMAD5-207ENST00000511116 LMAN2LQ9H0V9 348 aa26.24■■□□□ 1.79
SMAD5-207ENST00000511116 TUBE1Q9UJT0 475 aa26.24■■□□□ 1.79
SMAD5-207ENST00000511116 ADGRA3Q8IWK6 1321 aa26.23■■□□□ 1.79
SMAD5-207ENST00000511116 FBXO47Q5MNV8 452 aa26.23■■□□□ 1.79
SMAD5-207ENST00000511116 RSPH3Q86UC2 560 aa26.23■■□□□ 1.79
SMAD5-207ENST00000511116 RWDD3Q9Y3V2 267 aa26.23■■□□□ 1.79
SMAD5-207ENST00000511116 FAM86C2PA6NEL3 165 aa26.22■■□□□ 1.79
SMAD5-207ENST00000511116 H3BQ06 376 aaPredicted RBP26.22■■□□□ 1.79
SMAD5-207ENST00000511116 ENPP3O14638 875 aa26.22■■□□□ 1.79
SMAD5-207ENST00000511116 RPLP2P05387 115 aaKnown RBP26.22■■□□□ 1.79
SMAD5-207ENST00000511116 CALM1P0DP23 149 aa26.22■■□□□ 1.79
SMAD5-207ENST00000511116 CALM2P0DP24 149 aa26.22■■□□□ 1.79
SMAD5-207ENST00000511116 CALM3P0DP25 149 aa26.22■■□□□ 1.79
SMAD5-207ENST00000511116 BMPR1AP36894 532 aa26.22■■□□□ 1.79
SMAD5-207ENST00000511116 MTMR1Q13613 665 aa26.22■■□□□ 1.79
SMAD5-207ENST00000511116 CTC1Q2NKJ3 1217 aa26.22■■□□□ 1.79
SMAD5-207ENST00000511116 CRIPAKQ8N1N5 446 aa26.22■■□□□ 1.79
SMAD5-207ENST00000511116 LSG1Q9H089 658 aaKnown RBP26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms