RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 FGRP09769 529 aa10.41□□□□□ -0.74
USP53-206ENST00000510737 ERCC5P28715 1186 aaPredicted RBP10.41□□□□□ -0.74
USP53-206ENST00000510737 IL13P35225 146 aa10.41□□□□□ -0.74
USP53-206ENST00000510737 FXNQ16595 210 aa10.41□□□□□ -0.74
USP53-206ENST00000510737 PRAMEF18Q5VWM3 479 aa10.41□□□□□ -0.74
USP53-206ENST00000510737 BORAQ6PGQ7 559 aa10.41□□□□□ -0.74
USP53-206ENST00000510737 TTC9BQ8N6N2 239 aa10.41□□□□□ -0.74
USP53-206ENST00000510737 PPP4R1LQ9P1A2 415 aa10.41□□□□□ -0.74
USP53-206ENST00000510737 PPARGC1AQ9UBK2 798 aaKnown RBP10.41□□□□□ -0.74
USP53-206ENST00000510737 ST6GALNAC2Q9UJ37 374 aa10.41□□□□□ -0.74
USP53-206ENST00000510737 PPP2R2AP63151 447 aa10.4□□□□□ -0.74
USP53-206ENST00000510737 UGGT2Q9NYU1 1516 aa10.39□□□□□ -0.75
USP53-206ENST00000510737 A0A1W2PQU0 124 aa10.39□□□□□ -0.75
USP53-206ENST00000510737 C9orf118A6NHY6 69 aa10.39□□□□□ -0.75
USP53-206ENST00000510737 C1QTNF3-AMACRE9PGA6 284 aa10.39□□□□□ -0.75
USP53-206ENST00000510737 CHRNA2Q15822 529 aa10.39□□□□□ -0.75
USP53-206ENST00000510737 FAM124AQ86V42 546 aa10.39□□□□□ -0.75
USP53-206ENST00000510737 PROSER1Q86XN7 944 aa10.39□□□□□ -0.75
USP53-206ENST00000510737 CELF2-AS1Q8N7Q2 184 aa10.39□□□□□ -0.75
USP53-206ENST00000510737 MYOTQ9UBF9 498 aa10.39□□□□□ -0.75
USP53-206ENST00000510737 ZNF536O15090 1300 aa10.38□□□□□ -0.75
USP53-206ENST00000510737 VPS37DQ86XT2 251 aa10.38□□□□□ -0.75
USP53-206ENST00000510737 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.38□□□□□ -0.75
USP53-206ENST00000510737 JAM3Q9BX67 310 aa10.38□□□□□ -0.75
USP53-206ENST00000510737 EPB41L1Q9H4G0 881 aa10.38□□□□□ -0.75
USP53-206ENST00000510737 FER1L4A9Z1Z3 1794 aa10.38□□□□□ -0.75
USP53-206ENST00000510737 ABCA9Q8IUA7 1624 aa10.37□□□□□ -0.75
USP53-206ENST00000510737 PTPRTO14522 1441 aa10.37□□□□□ -0.75
USP53-206ENST00000510737 TMC5Q6UXY8 1006 aa10.37□□□□□ -0.75
USP53-206ENST00000510737 CROTQ9UKG9 612 aa10.37□□□□□ -0.75
USP53-206ENST00000510737 ABCA8O94911 1581 aa10.36□□□□□ -0.75
USP53-206ENST00000510737 DLX3O60479 287 aa10.36□□□□□ -0.75
USP53-206ENST00000510737 DGKIO75912 1065 aa10.36□□□□□ -0.75
USP53-206ENST00000510737 COL6A1P12109 1028 aa10.36□□□□□ -0.75
USP53-206ENST00000510737 CDSNQ15517 529 aa10.36□□□□□ -0.75
USP53-206ENST00000510737 PKN3Q6P5Z2 889 aa10.36□□□□□ -0.75
USP53-206ENST00000510737 EEPD1Q7L9B9 569 aa10.36□□□□□ -0.75
USP53-206ENST00000510737 MCF2L2Q86YR7 1114 aa10.36□□□□□ -0.75
USP53-206ENST00000510737 CLIC6Q96NY7 704 aa10.36□□□□□ -0.75
USP53-206ENST00000510737 TINF2Q9BSI4 451 aa10.36□□□□□ -0.75
USP53-206ENST00000510737 IER2Q9BTL4 223 aa10.36□□□□□ -0.75
USP53-206ENST00000510737 KRTAP17-1Q9BYP8 105 aa10.36□□□□□ -0.75
USP53-206ENST00000510737 NEO1Q92859 1461 aa10.36□□□□□ -0.75
USP53-206ENST00000510737 POGZQ7Z3K3 1410 aa10.35□□□□□ -0.75
USP53-206ENST00000510737 LAMTOR5O43504 91 aa10.35□□□□□ -0.75
USP53-206ENST00000510737 CYP1A1P04798 512 aaPredicted RBP10.35□□□□□ -0.75
USP53-206ENST00000510737 ZXDAP98168 799 aa10.35□□□□□ -0.75
USP53-206ENST00000510737 MAP4K2Q12851 820 aa10.35□□□□□ -0.75
USP53-206ENST00000510737 ICAM4Q14773 271 aa10.35□□□□□ -0.75
USP53-206ENST00000510737 PHF19Q5T6S3 580 aa10.35□□□□□ -0.75
USP53-206ENST00000510737 RBM12BQ8IXT5 1001 aaKnown RBP10.35□□□□□ -0.75
USP53-206ENST00000510737 PIP4K2CQ8TBX8 421 aa10.35□□□□□ -0.75
USP53-206ENST00000510737 IGDCC4Q8TDY8 1250 aa10.35□□□□□ -0.75
USP53-206ENST00000510737 HNRNPLLQ8WVV9 542 aaKnown RBP10.35□□□□□ -0.75
USP53-206ENST00000510737 PTPN18Q99952 460 aa10.35□□□□□ -0.75
USP53-206ENST00000510737 SMOC1Q9H4F8 434 aa10.35□□□□□ -0.75
USP53-206ENST00000510737 L2HGDHQ9H9P8 463 aa10.35□□□□□ -0.75
USP53-206ENST00000510737 ASH2LQ9UBL3 628 aa10.35□□□□□ -0.75
USP53-206ENST00000510737 FANCAO15360 1455 aa10.35□□□□□ -0.75
USP53-206ENST00000510737 GPR42O15529 346 aa10.34□□□□□ -0.75
USP53-206ENST00000510737 GLB1LQ6UWU2 654 aa10.34□□□□□ -0.75
USP53-206ENST00000510737 CLEC4DQ8WXI8 215 aa10.34□□□□□ -0.75
USP53-206ENST00000510737 TMEM168Q9H0V1 697 aa10.34□□□□□ -0.75
USP53-206ENST00000510737 ST7Q9NRC1 585 aa10.34□□□□□ -0.75
USP53-206ENST00000510737 HSPBP1Q9NZL4 362 aa10.34□□□□□ -0.75
USP53-206ENST00000510737 RICTORQ6R327 1708 aa10.33□□□□□ -0.76
USP53-206ENST00000510737 SLC27A2O14975 620 aa10.33□□□□□ -0.76
USP53-206ENST00000510737 AKAP8O43823 692 aaKnown RBP10.33□□□□□ -0.76
USP53-206ENST00000510737 TMEM209Q96SK2 561 aa10.33□□□□□ -0.76
USP53-206ENST00000510737 EPN3Q9H201 632 aa10.33□□□□□ -0.76
USP53-206ENST00000510737 CD248Q9HCU0 757 aa10.33□□□□□ -0.76
USP53-206ENST00000510737 GPR27Q9NS67 375 aa10.33□□□□□ -0.76
USP53-206ENST00000510737 ATP10BO94823 1461 aa10.33□□□□□ -0.76
USP53-206ENST00000510737 GRIN1Q05586 938 aa10.32□□□□□ -0.76
USP53-206ENST00000510737 PHOSPHO1Q8TCT1 267 aa10.32□□□□□ -0.76
USP53-206ENST00000510737 KCTD13Q8WZ19 329 aa10.32□□□□□ -0.76
USP53-206ENST00000510737 DVL3Q92997 716 aaPredicted RBP10.32□□□□□ -0.76
USP53-206ENST00000510737 SLC6A20Q9NP91 592 aa10.32□□□□□ -0.76
USP53-206ENST00000510737 ZMYM4Q5VZL5 1548 aa10.32□□□□□ -0.76
USP53-206ENST00000510737 ARHGEF12Q9NZN5 1544 aa10.32□□□□□ -0.76
USP53-206ENST00000510737 HSPA1LP34931 641 aa10.31□□□□□ -0.76
USP53-206ENST00000510737 KBTBD2Q8IY47 623 aa10.31□□□□□ -0.76
USP53-206ENST00000510737 CHST13Q8NET6 341 aa10.31□□□□□ -0.76
USP53-206ENST00000510737 PHF20Q9BVI0 1012 aa10.31□□□□□ -0.76
USP53-206ENST00000510737 AKNAQ7Z591 1439 aa10.31□□□□□ -0.76
USP53-206ENST00000510737 DENND4BO75064 1496 aaPredicted RBP10.3□□□□□ -0.76
USP53-206ENST00000510737 LTFP02788 710 aa10.3□□□□□ -0.76
USP53-206ENST00000510737 NTRK3Q16288 839 aa10.3□□□□□ -0.76
USP53-206ENST00000510737 KCNT2Q6UVM3 1135 aa10.3□□□□□ -0.76
USP53-206ENST00000510737 USP53Q70EK8 1073 aa10.3□□□□□ -0.76
USP53-206ENST00000510737 SPRED1Q7Z699 444 aa10.3□□□□□ -0.76
USP53-206ENST00000510737 NUDT10Q8NFP7 164 aa10.3□□□□□ -0.76
USP53-206ENST00000510737 NUDT11Q96G61 164 aa10.3□□□□□ -0.76
USP53-206ENST00000510737 TELO2Q9Y4R8 837 aa10.3□□□□□ -0.76
USP53-206ENST00000510737 FHOD3Q2V2M9 1422 aa10.3□□□□□ -0.76
USP53-206ENST00000510737 TCF3P15923 654 aa10.29□□□□□ -0.76
USP53-206ENST00000510737 EPHB4P54760 987 aa10.29□□□□□ -0.76
USP53-206ENST00000510737 SURF1Q15526 300 aa10.29□□□□□ -0.76
USP53-206ENST00000510737 CYP4F22Q6NT55 531 aa10.29□□□□□ -0.76
USP53-206ENST00000510737 TRMT10BQ6PF06 316 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms