RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 LLGL2Q6P1M3 1020 aa12.73□□□□□ -0.37
SNF8-207ENST00000509995 GIMAP6Q6P9H5 292 aa12.73□□□□□ -0.37
SNF8-207ENST00000509995 SIX5Q8N196 739 aa12.73□□□□□ -0.37
SNF8-207ENST00000509995 GPR161Q8N6U8 529 aaKnown RBP12.73□□□□□ -0.37
SNF8-207ENST00000509995 C16orf70Q9BSU1 422 aa12.73□□□□□ -0.37
SNF8-207ENST00000509995 LIMD1Q9UGP4 676 aa12.73□□□□□ -0.37
SNF8-207ENST00000509995 PPFIA4O75335 1185 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 SMIM10L2AP0DMW4 78 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 SMIM10L2BP0DMW5 78 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 GHRP10912 638 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 TRIM27P14373 513 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 SLC16A2P36021 539 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 LMNB2Q03252 620 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 CCDC96Q2M329 555 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 SYDE2Q5VT97 1194 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 CES5AQ6NT32 575 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 ERC1Q8IUD2 1116 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 NCDNQ9UBB6 729 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 FBXL21Q9UKT6 434 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 STX8Q9UNK0 236 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 KAT6AQ92794 2004 aa12.72□□□□□ -0.37
SNF8-207ENST00000509995 FNDC1Q4ZHG4 1894 aaPredicted RBP12.72□□□□□ -0.37
SNF8-207ENST00000509995 CEP295Q9C0D2 2601 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 FSCN2O14926 492 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 SP9P0CG40 484 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 ERVFC1P60507 584 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 ITIH3Q06033 890 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 COL9A3Q14050 684 aaPredicted RBP12.71□□□□□ -0.37
SNF8-207ENST00000509995 STXBP2Q15833 593 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 HSDL1Q3SXM5 330 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 TPRNQ4KMQ1 711 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 TTBK2Q6IQ55 1244 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 PDE12Q6L8Q7 609 aaKnown RBP12.71□□□□□ -0.37
SNF8-207ENST00000509995 BTNL9Q6UXG8 535 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 PLCD3Q8N3E9 789 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 LINC01599Q8WXQ3 324 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 STRBPQ96SI9 672 aaKnown RBP12.71□□□□□ -0.37
SNF8-207ENST00000509995 ADAM7Q9H2U9 754 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 RNPEPQ9H4A4 650 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 C1orf115Q9H7X2 142 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 EHMT1Q9H9B1 1298 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.37
SNF8-207ENST00000509995 PNMA2Q9UL42 364 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 DUSP12Q9UNI6 340 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 TNNQ9UQP3 1299 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 MTMR7Q9Y216 660 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 MRVI1Q9Y6F6 885 aa12.71□□□□□ -0.37
SNF8-207ENST00000509995 SMG1Q96Q15 3661 aaKnown RBP12.7□□□□□ -0.38
SNF8-207ENST00000509995 WDR19Q8NEZ3 1342 aa12.7□□□□□ -0.38
SNF8-207ENST00000509995 CNOT1A5YKK6 2376 aaKnown RBP12.7□□□□□ -0.38
SNF8-207ENST00000509995 KINO60870 393 aaKnown RBP12.7□□□□□ -0.38
SNF8-207ENST00000509995 CHRNA1P02708 482 aa12.7□□□□□ -0.38
SNF8-207ENST00000509995 RARSP54136 660 aaKnown RBP12.7□□□□□ -0.38
SNF8-207ENST00000509995 TFAP4Q01664 338 aa12.7□□□□□ -0.38
SNF8-207ENST00000509995 LPIN1Q14693 890 aa12.7□□□□□ -0.38
SNF8-207ENST00000509995 PPM1JQ5JR12 505 aa12.7□□□□□ -0.38
SNF8-207ENST00000509995 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
SNF8-207ENST00000509995 VARS2Q5ST30 1063 aaKnown RBP12.7□□□□□ -0.38
SNF8-207ENST00000509995 MYSM1Q5VVJ2 828 aa12.7□□□□□ -0.38
SNF8-207ENST00000509995 PLPP4Q5VZY2 271 aa12.7□□□□□ -0.38
SNF8-207ENST00000509995 NPAS4Q8IUM7 802 aa12.7□□□□□ -0.38
SNF8-207ENST00000509995 DCAF4Q8WV16 495 aa12.7□□□□□ -0.38
SNF8-207ENST00000509995 EPB41L4AQ9HCS5 686 aaPredicted RBP12.7□□□□□ -0.38
SNF8-207ENST00000509995 IL1RAPL2Q9NP60 686 aa12.7□□□□□ -0.38
SNF8-207ENST00000509995 USTQ9Y2C2 406 aa12.7□□□□□ -0.38
SNF8-207ENST00000509995 PCDHB12Q9Y5F1 795 aa12.7□□□□□ -0.38
SNF8-207ENST00000509995 LOXHD1Q8IVV2 1947 aa12.7□□□□□ -0.38
SNF8-207ENST00000509995 H3BRB1 525 aa12.69□□□□□ -0.38
SNF8-207ENST00000509995 FGF18O76093 207 aa12.69□□□□□ -0.38
SNF8-207ENST00000509995 MTHFRP42898 656 aa12.69□□□□□ -0.38
SNF8-207ENST00000509995 TBC1D8BQ0IIM8 1120 aa12.69□□□□□ -0.38
SNF8-207ENST00000509995 TDGQ13569 410 aa12.69□□□□□ -0.38
SNF8-207ENST00000509995 FAM9BQ8IZU0 186 aa12.69□□□□□ -0.38
SNF8-207ENST00000509995 NSUN6Q8TEA1 469 aaKnown RBP12.69□□□□□ -0.38
SNF8-207ENST00000509995 CASP10Q92851 521 aa12.69□□□□□ -0.38
SNF8-207ENST00000509995 SPATA33Q96N06 139 aa12.69□□□□□ -0.38
SNF8-207ENST00000509995 IWS1Q96ST2 819 aa12.69□□□□□ -0.38
SNF8-207ENST00000509995 TUT1Q9H6E5 874 aaKnown RBP12.69□□□□□ -0.38
SNF8-207ENST00000509995 FLNBO75369 2602 aaKnown RBP12.69□□□□□ -0.38
SNF8-207ENST00000509995 EOMESO95936 686 aa12.68□□□□□ -0.38
SNF8-207ENST00000509995 GNAT1P11488 350 aa12.68□□□□□ -0.38
SNF8-207ENST00000509995 TDO2P48775 406 aa12.68□□□□□ -0.38
SNF8-207ENST00000509995 GATMP50440 423 aa12.68□□□□□ -0.38
SNF8-207ENST00000509995 RGS22Q8NE09 1264 aa12.68□□□□□ -0.38
SNF8-207ENST00000509995 BOLA2Q9H3K6 86 aa12.68□□□□□ -0.38
SNF8-207ENST00000509995 CYP26B1Q9NR63 512 aa12.68□□□□□ -0.38
SNF8-207ENST00000509995 SETD4Q9NVD3 440 aa12.68□□□□□ -0.38
SNF8-207ENST00000509995 COL20A1Q9P218 1284 aa12.68□□□□□ -0.38
SNF8-207ENST00000509995 HIDE1A8MVS5 230 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 STK25O00506 426 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 SORBS3O60504 671 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 EIF3JO75822 258 aaKnown RBP12.67□□□□□ -0.38
SNF8-207ENST00000509995 LGALS2P05162 132 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 WEE2P0C1S8 567 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 MGAT3Q09327 533 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 APOBRQ0VD83 1088 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 CELF3Q5SZQ8 465 aaKnown RBP12.67□□□□□ -0.38
SNF8-207ENST00000509995 KIAA1841Q6NSI8 718 aa12.67□□□□□ -0.38
SNF8-207ENST00000509995 ZSCAN25Q6NSZ9 544 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms