RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 PKD2L1Q9P0L9 805 aa24.28■■□□□ 1.48
LIN54-208ENST00000509748 KAT6AQ92794 2004 aa24.27■■□□□ 1.48
LIN54-208ENST00000509748 PRPF3O43395 683 aaKnown RBP24.27■■□□□ 1.48
LIN54-208ENST00000509748 BAIAP3O94812 1187 aa24.27■■□□□ 1.48
LIN54-208ENST00000509748 PDIA3P30101 505 aaKnown RBP24.27■■□□□ 1.48
LIN54-208ENST00000509748 TCF7P36402 384 aaPredicted RBP24.27■■□□□ 1.48
LIN54-208ENST00000509748 TOB2Q14106 344 aaPredicted RBP24.27■■□□□ 1.48
LIN54-208ENST00000509748 RUFY3Q7L099 469 aa24.27■■□□□ 1.48
LIN54-208ENST00000509748 SEPT1Q8WYJ6 367 aa24.27■■□□□ 1.48
LIN54-208ENST00000509748 SLC9A7Q96T83 725 aa24.27■■□□□ 1.48
LIN54-208ENST00000509748 GLT8D2Q9H1C3 349 aa24.27■■□□□ 1.48
LIN54-208ENST00000509748 PRDM12Q9H4Q4 367 aa24.27■■□□□ 1.48
LIN54-208ENST00000509748 SLC28A3Q9HAS3 691 aa24.27■■□□□ 1.48
LIN54-208ENST00000509748 KCNH7Q9NS40 1196 aa24.27■■□□□ 1.48
LIN54-208ENST00000509748 ARP10275 920 aa24.26■■□□□ 1.47
LIN54-208ENST00000509748 SREBF1P36956 1147 aa24.26■■□□□ 1.47
LIN54-208ENST00000509748 AP3B2Q13367 1082 aa24.26■■□□□ 1.47
LIN54-208ENST00000509748 ERICH6BQ5W0A0 696 aa24.26■■□□□ 1.47
LIN54-208ENST00000509748 CNKSR3Q6P9H4 555 aa24.26■■□□□ 1.47
LIN54-208ENST00000509748 CRYGNQ8WXF5 182 aa24.26■■□□□ 1.47
LIN54-208ENST00000509748 ZMYND12Q9H0C1 365 aa24.26■■□□□ 1.47
LIN54-208ENST00000509748 ZNF215Q9UL58 517 aaPredicted RBP24.26■■□□□ 1.47
LIN54-208ENST00000509748 ESYT2A0FGR8 921 aa24.25■■□□□ 1.47
LIN54-208ENST00000509748 MEIS1O00470 390 aa24.25■■□□□ 1.47
LIN54-208ENST00000509748 THPOP40225 353 aa24.25■■□□□ 1.47
LIN54-208ENST00000509748 WDR5P61964 334 aaKnown RBP24.25■■□□□ 1.47
LIN54-208ENST00000509748 ADGRE1Q14246 886 aa24.25■■□□□ 1.47
LIN54-208ENST00000509748 CEP55Q53EZ4 464 aa24.25■■□□□ 1.47
LIN54-208ENST00000509748 HERC6Q8IVU3 1022 aa24.25■■□□□ 1.47
LIN54-208ENST00000509748 LMBR1Q8WVP7 490 aa24.25■■□□□ 1.47
LIN54-208ENST00000509748 PHKBQ93100 1093 aa24.25■■□□□ 1.47
LIN54-208ENST00000509748 PCYT2Q99447 389 aa24.25■■□□□ 1.47
LIN54-208ENST00000509748 JAKMIP3Q5VZ66 844 aa24.24■■□□□ 1.47
LIN54-208ENST00000509748 OSBPL7Q9BZF2 842 aa24.24■■□□□ 1.47
LIN54-208ENST00000509748 TM6SF1Q9BZW5 370 aa24.24■■□□□ 1.47
LIN54-208ENST00000509748 NCOA5Q9HCD5 579 aaKnown RBP24.24■■□□□ 1.47
LIN54-208ENST00000509748 TRANK1O15050 2925 aa24.24■■□□□ 1.47
LIN54-208ENST00000509748 RSPH10B2B2RC85 870 aa24.23■■□□□ 1.47
LIN54-208ENST00000509748 PPFIA3O75145 1194 aa24.23■■□□□ 1.47
LIN54-208ENST00000509748 LGR5O75473 907 aa24.23■■□□□ 1.47
LIN54-208ENST00000509748 ARHGEF15O94989 841 aa24.23■■□□□ 1.47
LIN54-208ENST00000509748 RSPH10BP0C881 870 aa24.23■■□□□ 1.47
LIN54-208ENST00000509748 IFNAR1P17181 557 aa24.23■■□□□ 1.47
LIN54-208ENST00000509748 ITGB3BPQ13352 177 aaPredicted RBP24.23■■□□□ 1.47
LIN54-208ENST00000509748 MKRN4PQ13434 485 aaPredicted RBP24.23■■□□□ 1.47
LIN54-208ENST00000509748 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.23■■□□□ 1.47
LIN54-208ENST00000509748 AGO4Q9HCK5 861 aaKnown RBP24.23■■□□□ 1.47
LIN54-208ENST00000509748 JPH1Q9HDC5 661 aaPredicted RBP24.23■■□□□ 1.47
LIN54-208ENST00000509748 NFASCO94856 1347 aa24.23■■□□□ 1.47
LIN54-208ENST00000509748 NRCAMQ92823 1304 aa24.22■■□□□ 1.47
LIN54-208ENST00000509748 ABHD14A-ACY1A0A1B0GW23 586 aa24.22■■□□□ 1.47
LIN54-208ENST00000509748 CA3P07451 260 aa24.22■■□□□ 1.47
LIN54-208ENST00000509748 GNAT1P11488 350 aa24.22■■□□□ 1.47
LIN54-208ENST00000509748 CCT2P78371 535 aaKnown RBP24.22■■□□□ 1.47
LIN54-208ENST00000509748 DEFB103AP81534 67 aa24.22■■□□□ 1.47
LIN54-208ENST00000509748 ARHGAP4P98171 946 aa24.22■■□□□ 1.47
LIN54-208ENST00000509748 PPP2R2DQ66LE6 453 aa24.22■■□□□ 1.47
LIN54-208ENST00000509748 USP38Q8NB14 1042 aa24.22■■□□□ 1.47
LIN54-208ENST00000509748 RNF26Q9BY78 433 aaPredicted RBP24.22■■□□□ 1.47
LIN54-208ENST00000509748 SLC9A2Q9UBY0 812 aa24.22■■□□□ 1.47
LIN54-208ENST00000509748 CYP46A1Q9Y6A2 500 aa24.22■■□□□ 1.47
LIN54-208ENST00000509748 EMSYQ7Z589 1322 aa24.21■■□□□ 1.47
LIN54-208ENST00000509748 FAM86B1E9PN63 330 aa24.21■■□□□ 1.47
LIN54-208ENST00000509748 CAND2O75155 1236 aa24.21■■□□□ 1.47
LIN54-208ENST00000509748 CYP3A4P08684 503 aa24.21■■□□□ 1.47
LIN54-208ENST00000509748 FAM86B2P0C5J1 330 aa24.21■■□□□ 1.47
LIN54-208ENST00000509748 NIPA1Q7RTP0 329 aa24.21■■□□□ 1.47
LIN54-208ENST00000509748 TMCO2Q7Z6W1 182 aaPredicted RBP24.21■■□□□ 1.47
LIN54-208ENST00000509748 SMARCAD1Q9H4L7 1026 aa24.21■■□□□ 1.47
LIN54-208ENST00000509748 ERAP1Q9NZ08 941 aa24.21■■□□□ 1.47
LIN54-208ENST00000509748 IGLV3-22A0A075B6J6 115 aa24.2■■□□□ 1.46
LIN54-208ENST00000509748 KCNJ6P48051 423 aa24.2■■□□□ 1.46
LIN54-208ENST00000509748 PLEKHG4Q58EX7 1191 aa24.2■■□□□ 1.46
LIN54-208ENST00000509748 FAM26DQ5JW98 314 aa24.2■■□□□ 1.46
LIN54-208ENST00000509748 MARCH8Q5T0T0 291 aa24.2■■□□□ 1.46
LIN54-208ENST00000509748 DBF4BQ8NFT6 615 aa24.2■■□□□ 1.46
LIN54-208ENST00000509748 GAS2L1Q99501 681 aaPredicted RBP24.2■■□□□ 1.46
LIN54-208ENST00000509748 LARP6Q9BRS8 491 aaKnown RBP24.2■■□□□ 1.46
LIN54-208ENST00000509748 SLC26A6Q9BXS9 759 aa24.2■■□□□ 1.46
LIN54-208ENST00000509748 UPF3BQ9BZI7 483 aaKnown RBP24.2■■□□□ 1.46
LIN54-208ENST00000509748 C6orf50Q9HD87 102 aa24.2■■□□□ 1.46
LIN54-208ENST00000509748 ATG7O95352 703 aa24.19■■□□□ 1.46
LIN54-208ENST00000509748 MARK3P27448 753 aa24.19■■□□□ 1.46
LIN54-208ENST00000509748 ACTR2P61160 394 aa24.19■■□□□ 1.46
LIN54-208ENST00000509748 TAP1Q03518 808 aa24.19■■□□□ 1.46
LIN54-208ENST00000509748 IKBKEQ14164 716 aa24.19■■□□□ 1.46
LIN54-208ENST00000509748 RUFY4Q6ZNE9 571 aa24.19■■□□□ 1.46
LIN54-208ENST00000509748 RPAINQ86UA6 219 aa24.19■■□□□ 1.46
LIN54-208ENST00000509748 CCDC12Q8WUD4 166 aaPredicted RBP24.19■■□□□ 1.46
LIN54-208ENST00000509748 GLG1Q92896 1179 aa24.19■■□□□ 1.46
LIN54-208ENST00000509748 ZNF274Q96GC6 653 aaPredicted RBP24.19■■□□□ 1.46
LIN54-208ENST00000509748 MICAL3Q7RTP6 2002 aa24.18■■□□□ 1.46
LIN54-208ENST00000509748 MBLAC1A4D2B0 266 aaPredicted RBP24.18■■□□□ 1.46
LIN54-208ENST00000509748 DLL1O00548 723 aa24.18■■□□□ 1.46
LIN54-208ENST00000509748 DHX15O43143 795 aaKnown RBP24.18■■□□□ 1.46
LIN54-208ENST00000509748 EDIL3O43854 480 aa24.18■■□□□ 1.46
LIN54-208ENST00000509748 CCNE2O96020 404 aa24.18■■□□□ 1.46
LIN54-208ENST00000509748 CTSHP09668 335 aa24.18■■□□□ 1.46
LIN54-208ENST00000509748 PPFIA1Q13136 1202 aa24.18■■□□□ 1.46
LIN54-208ENST00000509748 GRIK4Q16099 956 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms