RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 ZNF888P0CJ79 500 aaPredicted RBP4.06□□□□□ -1.76
XRCC4-204ENST00000509268 HHEXQ03014 270 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 TESK1Q15569 626 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 ZKSCAN2Q63HK3 967 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 GTF2IRD2BQ6EKJ0 949 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 GTF2IRD2Q86UP8 949 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 TMPRSS6Q8IU80 811 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 THEMISQ8N1K5 641 aaPredicted RBP4.06□□□□□ -1.76
XRCC4-204ENST00000509268 KLHL6Q8WZ60 621 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 ZNF764Q96H86 408 aaPredicted RBP4.06□□□□□ -1.76
XRCC4-204ENST00000509268 SCYL1Q96KG9 808 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 CRBNQ96SW2 442 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 APBA2Q99767 749 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 PLA2G12BQ9BX93 195 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 NKX2-4Q9H2Z4 354 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 TLR9Q9NR96 1032 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 PTGFRNQ9P2B2 879 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 ARHGAP20Q9P2F6 1191 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 RBPJLQ9UBG7 517 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 ZFP69BQ9UJL9 534 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 NAT2P11245 290 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 POLD1P28340 1107 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 ZNF143P52747 638 aaPredicted RBP4.06□□□□□ -1.76
XRCC4-204ENST00000509268 SKIDA1Q1XH10 827 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 RNF151Q2KHN1 245 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 DNAJC14Q6Y2X3 702 aaPredicted RBP4.06□□□□□ -1.76
XRCC4-204ENST00000509268 PRIMA1Q86XR5 153 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 STPG3Q8N7X2 389 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 PPT2Q9UMR5 302 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 PCDHB10Q9UN67 800 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 PTPN22Q9Y2R2 807 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 GIT1Q9Y2X7 761 aa4.06□□□□□ -1.76
XRCC4-204ENST00000509268 KRTAP23-1A1A580 65 aa4.05□□□□□ -1.76
XRCC4-204ENST00000509268 INO80B-WBP1J3KQ70 363 aa4.05□□□□□ -1.76
XRCC4-204ENST00000509268 KRIT1O00522 736 aa4.05□□□□□ -1.76
XRCC4-204ENST00000509268 CYP27B1O15528 508 aa4.05□□□□□ -1.76
XRCC4-204ENST00000509268 ERBB2P04626 1255 aa4.05□□□□□ -1.76
XRCC4-204ENST00000509268 FOXL1Q12952 345 aa4.05□□□□□ -1.76
XRCC4-204ENST00000509268 NFYCQ13952 458 aa4.05□□□□□ -1.76
XRCC4-204ENST00000509268 COL9A2Q14055 689 aaPredicted RBP4.05□□□□□ -1.76
XRCC4-204ENST00000509268 PHF19Q5T6S3 580 aa4.05□□□□□ -1.76
XRCC4-204ENST00000509268 SYCE2Q6PIF2 218 aa4.05□□□□□ -1.76
XRCC4-204ENST00000509268 ADGRE4PQ86SQ3 457 aa4.05□□□□□ -1.76
XRCC4-204ENST00000509268 TRIM59Q8IWR1 403 aa4.05□□□□□ -1.76
XRCC4-204ENST00000509268 DPYSL5Q9BPU6 564 aa4.05□□□□□ -1.76
XRCC4-204ENST00000509268 INO80BQ9C086 356 aaPredicted RBP4.05□□□□□ -1.76
XRCC4-204ENST00000509268 PDGFDQ9GZP0 370 aaPredicted RBP4.05□□□□□ -1.76
XRCC4-204ENST00000509268 C12orf65Q9H3J6 166 aaKnown RBP4.05□□□□□ -1.76
XRCC4-204ENST00000509268 NELFAQ9H3P2 528 aa4.05□□□□□ -1.76
XRCC4-204ENST00000509268 NR2E1Q9Y466 385 aa4.05□□□□□ -1.76
XRCC4-204ENST00000509268 A0A1W2PQH9 124 aa4.04□□□□□ -1.76
XRCC4-204ENST00000509268 MEFVO15553 781 aaPredicted RBP4.04□□□□□ -1.76
XRCC4-204ENST00000509268 NUDT3O95989 172 aa4.04□□□□□ -1.76
XRCC4-204ENST00000509268 GCP02774 474 aa4.04□□□□□ -1.76
XRCC4-204ENST00000509268 HOXC12P31275 282 aa4.04□□□□□ -1.76
XRCC4-204ENST00000509268 GLRBP48167 497 aa4.04□□□□□ -1.76
XRCC4-204ENST00000509268 C21orf58P58505 322 aa4.04□□□□□ -1.76
XRCC4-204ENST00000509268 ACBD5Q5T8D3 534 aaPredicted RBP4.04□□□□□ -1.76
XRCC4-204ENST00000509268 CCDC103Q8IW40 242 aa4.04□□□□□ -1.76
XRCC4-204ENST00000509268 RPUSD2Q8IZ73 545 aaKnown RBP4.04□□□□□ -1.76
XRCC4-204ENST00000509268 RCBTB1Q8NDN9 531 aa4.04□□□□□ -1.76
XRCC4-204ENST00000509268 OR6P1Q8NGX9 317 aa4.04□□□□□ -1.76
XRCC4-204ENST00000509268 ADARB2Q9NS39 739 aaKnown RBP4.04□□□□□ -1.76
XRCC4-204ENST00000509268 PLA2G3Q9NZ20 509 aa4.04□□□□□ -1.76
XRCC4-204ENST00000509268 APEX2Q9UBZ4 518 aa4.04□□□□□ -1.76
XRCC4-204ENST00000509268 MASP2O00187 686 aa4.03□□□□□ -1.76
XRCC4-204ENST00000509268 LMNAP02545 664 aaKnown RBP4.03□□□□□ -1.76
XRCC4-204ENST00000509268 MSX2P35548 267 aaPredicted RBP4.03□□□□□ -1.76
XRCC4-204ENST00000509268 TAGLNQ01995 201 aaKnown RBP4.03□□□□□ -1.76
XRCC4-204ENST00000509268 CYP4F3Q08477 520 aa4.03□□□□□ -1.76
XRCC4-204ENST00000509268 TOP3AQ13472 1001 aaPredicted RBP4.03□□□□□ -1.76
XRCC4-204ENST00000509268 SND1Q7KZF4 910 aaKnown RBP eCLIP4.03□□□□□ -1.76
XRCC4-204ENST00000509268 SGMS1Q86VZ5 419 aa4.03□□□□□ -1.76
XRCC4-204ENST00000509268 MICAL1Q8TDZ2 1067 aa4.03□□□□□ -1.76
XRCC4-204ENST00000509268 CHAMP1Q96JM3 812 aa4.03□□□□□ -1.76
XRCC4-204ENST00000509268 MRGPRX3Q96LB0 322 aa4.03□□□□□ -1.76
XRCC4-204ENST00000509268 SLC6A20Q9NP91 592 aa4.03□□□□□ -1.76
XRCC4-204ENST00000509268 CLDND1Q9NY35 253 aa4.03□□□□□ -1.76
XRCC4-204ENST00000509268 PUF60Q9UHX1 559 aaKnown RBP4.03□□□□□ -1.76
XRCC4-204ENST00000509268 A0A0A6YYK5 440 aaPredicted RBP4.02□□□□□ -1.77
XRCC4-204ENST00000509268 ARNTLO00327 626 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 MATN2O00339 956 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 FAHP16930 419 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 LTBRP36941 435 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 PFKPQ01813 784 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 FSTL1Q12841 308 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 DPP8Q6V1X1 898 aaPredicted RBP4.02□□□□□ -1.77
XRCC4-204ENST00000509268 CCDC140Q96MF4 163 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 FBXL7Q9UJT9 491 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 NUB1Q9Y5A7 615 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 ARHGAP6O43182 974 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 SCG5P05408 212 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 CDK4P11802 303 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 PROZP22891 400 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 KIAA1211LQ6NV74 962 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 CLEC4DQ8WXI8 215 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 PCDHA2Q9Y5H9 948 aa4.02□□□□□ -1.77
XRCC4-204ENST00000509268 IL18BPO95998 194 aa4.01□□□□□ -1.77
XRCC4-204ENST00000509268 CPP00450 1065 aa4.01□□□□□ -1.77
XRCC4-204ENST00000509268 CD38P28907 300 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms