RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 SCFD2Q8WU76 684 aa4.59□□□□□ -1.67
RNF4-211ENST00000509206 CHURC1Q8WUH1 139 aa4.59□□□□□ -1.67
RNF4-211ENST00000509206 KATNAL1Q9BW62 490 aa4.59□□□□□ -1.67
RNF4-211ENST00000509206 TRAIPQ9BWF2 469 aa4.59□□□□□ -1.67
RNF4-211ENST00000509206 MKNK2Q9HBH9 465 aa4.59□□□□□ -1.67
RNF4-211ENST00000509206 SLC38A10Q9HBR0 1119 aa4.59□□□□□ -1.67
RNF4-211ENST00000509206 A1CFQ9NQ94 594 aaKnown RBP4.59□□□□□ -1.67
RNF4-211ENST00000509206 PIH1D3Q9NQM4 214 aaKnown RBP4.59□□□□□ -1.67
RNF4-211ENST00000509206 ANGPTL2Q9UKU9 493 aa4.59□□□□□ -1.67
RNF4-211ENST00000509206 PLAGL2Q9UPG8 496 aa4.59□□□□□ -1.67
RNF4-211ENST00000509206 DDX49Q9Y6V7 483 aaKnown RBP4.59□□□□□ -1.67
RNF4-211ENST00000509206 MYO15AQ9UKN7 3530 aa4.59□□□□□ -1.68
RNF4-211ENST00000509206 MAP1BP46821 2468 aaKnown RBP4.58□□□□□ -1.68
RNF4-211ENST00000509206 TET1Q8NFU7 2136 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 SIP14410 1827 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 CFAP47Q6ZTR5 3102 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 PTPDC1A2A3K4 754 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 TMEM232C9JQI7 657 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 NR1I2O75469 434 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 NDUFB10O96000 172 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 CYP2D6P10635 497 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 SOX11P35716 441 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 ZNF200P98182 395 aaPredicted RBP4.58□□□□□ -1.68
RNF4-211ENST00000509206 NAALADL2Q58DX5 795 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 PPM1JQ5JR12 505 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 SPECC1Q5M775 1068 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 TMED8Q6PL24 325 aaPredicted RBP4.58□□□□□ -1.68
RNF4-211ENST00000509206 ADGRD2Q7Z7M1 963 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 SCUBE3Q8IX30 993 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 TMEM87AQ8NBN3 555 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 POF1BQ8WVV4 589 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 ATRIPQ8WXE1 791 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 DHX38Q92620 1227 aaKnown RBP4.58□□□□□ -1.68
RNF4-211ENST00000509206 APBB2Q92870 758 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 COPS5Q92905 334 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 NECTIN4Q96NY8 510 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 CDCA3Q99618 268 aaPredicted RBP4.58□□□□□ -1.68
RNF4-211ENST00000509206 ALG2Q9H553 416 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 DCP1AQ9NPI6 582 aaPredicted RBP4.58□□□□□ -1.68
RNF4-211ENST00000509206 GPR108Q9NPR9 543 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 HDAC6Q9UBN7 1215 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 CLIP2Q9UDT6 1046 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 GTF2IRD1Q9UHL9 959 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 ZFHX4Q86UP3 3567 aa4.58□□□□□ -1.68
RNF4-211ENST00000509206 C2CD4DB7Z1M9 353 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 GH1P01241 217 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 ASGR2P07307 311 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 MMP3P08254 477 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 BMP3P12645 472 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 HOXB8P17481 243 aaPredicted RBP4.57□□□□□ -1.68
RNF4-211ENST00000509206 CALML3P27482 149 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 ALDH5A1P51649 535 aaPredicted RBP4.57□□□□□ -1.68
RNF4-211ENST00000509206 RBL2Q08999 1139 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 SEMA3FQ13275 785 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 DGKDQ16760 1214 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 KIAA0753Q2KHM9 967 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 PLEKHG4Q58EX7 1191 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 SLC9C2Q5TAH2 1124 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 SLFN13Q68D06 897 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 ANKRD54Q6NXT1 300 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 LLGL2Q6P1M3 1020 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 SESTD1Q86VW0 696 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 ZNF444Q8N0Y2 327 aaPredicted RBP4.57□□□□□ -1.68
RNF4-211ENST00000509206 SIX5Q8N196 739 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 STK11IPQ8N1F8 1099 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 TDRD5Q8NAT2 981 aaKnown RBP4.57□□□□□ -1.68
RNF4-211ENST00000509206 KLHL23Q8NBE8 558 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 SPPL3Q8TCT6 385 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 SDR42E1Q8WUS8 393 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 AFG1LQ8WV93 481 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 SUSD6Q92537 303 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 P2RX5Q93086 422 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 CHMP4CQ96CF2 233 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 ACSF2Q96CM8 615 aaPredicted RBP4.57□□□□□ -1.68
RNF4-211ENST00000509206 BORCS6Q96GS4 357 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 PURBQ96QR8 312 aaKnown RBP4.57□□□□□ -1.68
RNF4-211ENST00000509206 DBNDD2Q9BQY9 259 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 AAASQ9NRG9 546 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 CYP39A1Q9NYL5 469 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 DBR1Q9UK59 544 aaKnown RBP4.57□□□□□ -1.68
RNF4-211ENST00000509206 GMEB2Q9UKD1 530 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 CCPG1Q9ULG6 757 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 PCDHB12Q9Y5F1 795 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 SIPA1L1O43166 1804 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 CEP250Q9BV73 2442 aa4.57□□□□□ -1.68
RNF4-211ENST00000509206 TRIP12Q14669 1992 aaPredicted RBP4.56□□□□□ -1.68
RNF4-211ENST00000509206 MYH1P12882 1939 aa4.56□□□□□ -1.68
RNF4-211ENST00000509206 GPR179Q6PRD1 2367 aa4.56□□□□□ -1.68
RNF4-211ENST00000509206 ADGRA3Q8IWK6 1321 aa4.56□□□□□ -1.68
RNF4-211ENST00000509206 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.56□□□□□ -1.68
RNF4-211ENST00000509206 LOC102724159A0A0B4J2E5 919 aa4.56□□□□□ -1.68
RNF4-211ENST00000509206 RBM47A0AV96 593 aaKnown RBP4.56□□□□□ -1.68
RNF4-211ENST00000509206 C17orf102A2RUQ5 167 aa4.56□□□□□ -1.68
RNF4-211ENST00000509206 EIF4E1BA6NMX2 242 aaKnown RBP4.56□□□□□ -1.68
RNF4-211ENST00000509206 ZIC2O95409 532 aaPredicted RBP4.56□□□□□ -1.68
RNF4-211ENST00000509206 F12P00748 615 aaPredicted RBP4.56□□□□□ -1.68
RNF4-211ENST00000509206 ITGB1P05556 798 aa4.56□□□□□ -1.68
RNF4-211ENST00000509206 GNAI3P08754 354 aa4.56□□□□□ -1.68
RNF4-211ENST00000509206 CTSHP09668 335 aa4.56□□□□□ -1.68
RNF4-211ENST00000509206 SP9P0CG40 484 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms