RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 GRM4Q14833 912 aa18.5■□□□□ 0.55
CXCL1-202ENST00000509101 INPP4AQ96PE3 977 aaPredicted RBP18.5■□□□□ 0.55
CXCL1-202ENST00000509101 RIOX1Q9H6W3 641 aa18.5■□□□□ 0.55
CXCL1-202ENST00000509101 RTEL1Q9NZ71 1219 aa18.5■□□□□ 0.55
CXCL1-202ENST00000509101 TTC3P53804 2025 aa18.5■□□□□ 0.55
CXCL1-202ENST00000509101 GRM6O15303 877 aa18.49■□□□□ 0.55
CXCL1-202ENST00000509101 GHRP10912 638 aa18.49■□□□□ 0.55
CXCL1-202ENST00000509101 IRS1P35568 1242 aa18.49■□□□□ 0.55
CXCL1-202ENST00000509101 ADAM17P78536 824 aa18.49■□□□□ 0.55
CXCL1-202ENST00000509101 HYAL1Q12794 435 aa18.49■□□□□ 0.55
CXCL1-202ENST00000509101 FAM26DQ5JW98 314 aa18.49■□□□□ 0.55
CXCL1-202ENST00000509101 CHD1LQ86WJ1 897 aa18.49■□□□□ 0.55
CXCL1-202ENST00000509101 SMC5Q8IY18 1101 aa18.49■□□□□ 0.55
CXCL1-202ENST00000509101 FBXL18Q96ME1 805 aa18.49■□□□□ 0.55
CXCL1-202ENST00000509101 C11orf84Q9BUA3 381 aaPredicted RBP18.49■□□□□ 0.55
CXCL1-202ENST00000509101 IL25Q9H293 177 aa18.49■□□□□ 0.55
CXCL1-202ENST00000509101 OSBPL3Q9H4L5 887 aa18.49■□□□□ 0.55
CXCL1-202ENST00000509101 SPATA31C2B4DYI2 1134 aa18.48■□□□□ 0.55
CXCL1-202ENST00000509101 C5orf67F2Z3F1 127 aa18.48■□□□□ 0.55
CXCL1-202ENST00000509101 FIBPO43427 364 aa18.48■□□□□ 0.55
CXCL1-202ENST00000509101 CYTH3O43739 400 aa18.48■□□□□ 0.55
CXCL1-202ENST00000509101 STAM2O75886 525 aa18.48■□□□□ 0.55
CXCL1-202ENST00000509101 LINC00271P0C7V0 271 aa18.48■□□□□ 0.55
CXCL1-202ENST00000509101 DLX2Q07687 328 aaPredicted RBP18.48■□□□□ 0.55
CXCL1-202ENST00000509101 CTC1Q2NKJ3 1217 aa18.48■□□□□ 0.55
CXCL1-202ENST00000509101 RUFY4Q6ZNE9 571 aa18.48■□□□□ 0.55
CXCL1-202ENST00000509101 HFE2Q6ZVN8 426 aa18.48■□□□□ 0.55
CXCL1-202ENST00000509101 PIBF1Q8WXW3 757 aa18.48■□□□□ 0.55
CXCL1-202ENST00000509101 LMAN2LQ9H0V9 348 aa18.48■□□□□ 0.55
CXCL1-202ENST00000509101 RC3H2Q9HBD1 1191 aaKnown RBP18.48■□□□□ 0.55
CXCL1-202ENST00000509101 TECTAO75443 2155 aa18.47■□□□□ 0.55
CXCL1-202ENST00000509101 PNMA6FA0A0J9YX94 578 aa18.47■□□□□ 0.55
CXCL1-202ENST00000509101 MBTPS2O43462 519 aa18.47■□□□□ 0.55
CXCL1-202ENST00000509101 NCK2O43639 380 aa18.47■□□□□ 0.55
CXCL1-202ENST00000509101 TBX10O75333 385 aa18.47■□□□□ 0.55
CXCL1-202ENST00000509101 CHRNA1P02708 482 aa18.47■□□□□ 0.55
CXCL1-202ENST00000509101 RB1P06400 928 aa18.47■□□□□ 0.55
CXCL1-202ENST00000509101 GTF2F1P35269 517 aaKnown RBP eCLIP18.47■□□□□ 0.55
CXCL1-202ENST00000509101 BMPR1AP36894 532 aa18.47■□□□□ 0.55
CXCL1-202ENST00000509101 SMAD2Q15796 467 aaKnown RBP18.47■□□□□ 0.55
CXCL1-202ENST00000509101 UPF3BQ9BZI7 483 aaKnown RBP18.47■□□□□ 0.55
CXCL1-202ENST00000509101 SENP2Q9HC62 589 aa18.47■□□□□ 0.55
CXCL1-202ENST00000509101 MUTYHQ9UIF7 546 aa18.47■□□□□ 0.55
CXCL1-202ENST00000509101 RWDD3Q9Y3V2 267 aa18.47■□□□□ 0.55
CXCL1-202ENST00000509101 PLXNA4Q9HCM2 1894 aa18.47■□□□□ 0.55
CXCL1-202ENST00000509101 LPIN1Q14693 890 aa18.46■□□□□ 0.55
CXCL1-202ENST00000509101 POP1Q99575 1024 aaKnown RBP18.46■□□□□ 0.55
CXCL1-202ENST00000509101 KCNH6Q9H252 994 aa18.46■□□□□ 0.55
CXCL1-202ENST00000509101 IGFLR1Q9H665 355 aa18.46■□□□□ 0.55
CXCL1-202ENST00000509101 NRCAMQ92823 1304 aa18.46■□□□□ 0.55
CXCL1-202ENST00000509101 IFIT3O14879 490 aaKnown RBP18.45■□□□□ 0.54
CXCL1-202ENST00000509101 LINC01565O15544 149 aa18.45■□□□□ 0.54
CXCL1-202ENST00000509101 MMP1P03956 469 aa18.45■□□□□ 0.54
CXCL1-202ENST00000509101 MGAT3Q09327 533 aa18.45■□□□□ 0.54
CXCL1-202ENST00000509101 TRDNQ13061 729 aa18.45■□□□□ 0.54
CXCL1-202ENST00000509101 SMAD4Q13485 552 aaKnown RBP18.45■□□□□ 0.54
CXCL1-202ENST00000509101 BTG3Q14201 252 aaPredicted RBP18.45■□□□□ 0.54
CXCL1-202ENST00000509101 CLP1Q92989 425 aaKnown RBP18.45■□□□□ 0.54
CXCL1-202ENST00000509101 EHMT1Q9H9B1 1298 aa18.45■□□□□ 0.54
CXCL1-202ENST00000509101 ERICH2A1L162 156 aa18.44■□□□□ 0.54
CXCL1-202ENST00000509101 TCF7P36402 384 aaPredicted RBP18.44■□□□□ 0.54
CXCL1-202ENST00000509101 NUCB1Q02818 461 aa18.44■□□□□ 0.54
CXCL1-202ENST00000509101 PPFIA1Q13136 1202 aa18.44■□□□□ 0.54
CXCL1-202ENST00000509101 WTAPQ15007 396 aa18.44■□□□□ 0.54
CXCL1-202ENST00000509101 PCNX4Q63HM2 1172 aa18.44■□□□□ 0.54
CXCL1-202ENST00000509101 TAF2Q6P1X5 1199 aa18.44■□□□□ 0.54
CXCL1-202ENST00000509101 USP17L6PQ6QN14 398 aa18.44■□□□□ 0.54
CXCL1-202ENST00000509101 SMARCC2Q8TAQ2 1214 aa18.44■□□□□ 0.54
CXCL1-202ENST00000509101 SENP7Q9BQF6 1050 aa18.44■□□□□ 0.54
CXCL1-202ENST00000509101 RWDD1Q9H446 243 aaPredicted RBP18.44■□□□□ 0.54
CXCL1-202ENST00000509101 CD207Q9UJ71 328 aa18.44■□□□□ 0.54
CXCL1-202ENST00000509101 TUBE1Q9UJT0 475 aa18.44■□□□□ 0.54
CXCL1-202ENST00000509101 KMT2EQ8IZD2 1858 aa18.43■□□□□ 0.54
CXCL1-202ENST00000509101 ENPP3O14638 875 aa18.43■□□□□ 0.54
CXCL1-202ENST00000509101 MARK3P27448 753 aa18.43■□□□□ 0.54
CXCL1-202ENST00000509101 TROAPQ12815 778 aa18.43■□□□□ 0.54
CXCL1-202ENST00000509101 HERC4Q5GLZ8 1057 aaPredicted RBP18.43■□□□□ 0.54
CXCL1-202ENST00000509101 RSPH3Q86UC2 560 aa18.43■□□□□ 0.54
CXCL1-202ENST00000509101 RNF135Q8IUD6 432 aa18.43■□□□□ 0.54
CXCL1-202ENST00000509101 DNAJB3Q8WWF6 145 aa18.43■□□□□ 0.54
CXCL1-202ENST00000509101 LINC01599Q8WXQ3 324 aa18.43■□□□□ 0.54
CXCL1-202ENST00000509101 ZNF689Q96CS4 500 aaPredicted RBP18.43■□□□□ 0.54
CXCL1-202ENST00000509101 ALG13Q9NP73 1137 aaKnown RBP18.43■□□□□ 0.54
CXCL1-202ENST00000509101 CDY2AQ9Y6F7 541 aa18.43■□□□□ 0.54
CXCL1-202ENST00000509101 STXBP3O00186 592 aa18.42■□□□□ 0.54
CXCL1-202ENST00000509101 NDUFV1P49821 464 aa18.42■□□□□ 0.54
CXCL1-202ENST00000509101 GRIK4Q16099 956 aa18.42■□□□□ 0.54
CXCL1-202ENST00000509101 FBXO47Q5MNV8 452 aa18.42■□□□□ 0.54
CXCL1-202ENST00000509101 TSHZ1Q6ZSZ6 1077 aa18.42■□□□□ 0.54
CXCL1-202ENST00000509101 RALYLQ86SE5 291 aaKnown RBP18.42■□□□□ 0.54
CXCL1-202ENST00000509101 NLRX1Q86UT6 975 aa18.42■□□□□ 0.54
CXCL1-202ENST00000509101 CUL5Q93034 780 aa18.42■□□□□ 0.54
CXCL1-202ENST00000509101 MFSD14AQ96MC6 490 aa18.42■□□□□ 0.54
CXCL1-202ENST00000509101 MRPL42Q9Y6G3 142 aaKnown RBP18.42■□□□□ 0.54
CXCL1-202ENST00000509101 ATP9AO75110 1047 aa18.41■□□□□ 0.54
CXCL1-202ENST00000509101 DGKIO75912 1065 aa18.41■□□□□ 0.54
CXCL1-202ENST00000509101 IGHDP01880 384 aa18.41■□□□□ 0.54
CXCL1-202ENST00000509101 CYP21A2P08686 494 aa18.41■□□□□ 0.54
CXCL1-202ENST00000509101 CD52P31358 61 aa18.41■□□□□ 0.54
CXCL1-202ENST00000509101 CAMK1Q14012 370 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms