RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 COA3Q9Y2R0 106 aaPredicted RBP3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 PCDHB4Q9Y5E5 795 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 PCDHA2Q9Y5H9 948 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 A0A087X1B8 175 aa3.8□□□□□ -1.8
DEPDC1B-204ENST00000509006 UNCXA6NJT0 531 aa3.8□□□□□ -1.8
DEPDC1B-204ENST00000509006 PLSCR1O15162 318 aa3.8□□□□□ -1.8
DEPDC1B-204ENST00000509006 KLHL18O94889 574 aa3.8□□□□□ -1.8
DEPDC1B-204ENST00000509006 GRIA2P42262 883 aa3.8□□□□□ -1.8
DEPDC1B-204ENST00000509006 SV2CQ496J9 727 aa3.8□□□□□ -1.8
DEPDC1B-204ENST00000509006 PHOSPHO1Q8TCT1 267 aa3.8□□□□□ -1.8
DEPDC1B-204ENST00000509006 EPB41L1Q9H4G0 881 aa3.8□□□□□ -1.8
DEPDC1B-204ENST00000509006 MYOTQ9UBF9 498 aa3.8□□□□□ -1.8
DEPDC1B-204ENST00000509006 MRVI1Q9Y6F6 885 aa3.8□□□□□ -1.8
DEPDC1B-204ENST00000509006 SLC4A7Q9Y6M7 1214 aa3.8□□□□□ -1.8
DEPDC1B-204ENST00000509006 DGKIO75912 1065 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 C1SP09871 688 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 COMTP21964 271 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 CSF2RBP32927 897 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 INHBCP55103 352 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 TNNI3KQ59H18 835 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 AGBL4Q5VU57 503 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 LARP1BQ659C4 914 aaKnown RBP3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 Q6ZUG5 572 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 TAX1BP1Q86VP1 789 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 DNAJC10Q8IXB1 793 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 FUKQ8N0W3 1084 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 TTLL11Q8NHH1 800 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 EDAQ92838 391 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 PDGFDQ9GZP0 370 aaPredicted RBP3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 SMOC1Q9H4F8 434 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 CLDND1Q9NY35 253 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 ASH2LQ9UBL3 628 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 PRKAG3Q9UGI9 489 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 PTPN22Q9Y2R2 807 aa3.79□□□□□ -1.8
DEPDC1B-204ENST00000509006 ETFBP38117 255 aa3.78□□□□□ -1.8
DEPDC1B-204ENST00000509006 MAP4K2Q12851 820 aa3.78□□□□□ -1.8
DEPDC1B-204ENST00000509006 SLC10A6Q3KNW5 377 aa3.78□□□□□ -1.8
DEPDC1B-204ENST00000509006 CYP4F22Q6NT55 531 aa3.78□□□□□ -1.8
DEPDC1B-204ENST00000509006 LDLRAD3Q86YD5 345 aa3.78□□□□□ -1.8
DEPDC1B-204ENST00000509006 IFNL2Q8IZJ0 200 aa3.78□□□□□ -1.8
DEPDC1B-204ENST00000509006 DTX3Q8N9I9 347 aa3.78□□□□□ -1.8
DEPDC1B-204ENST00000509006 CCSER2Q9H7U1 834 aa3.78□□□□□ -1.8
DEPDC1B-204ENST00000509006 SLC6A20Q9NP91 592 aa3.78□□□□□ -1.8
DEPDC1B-204ENST00000509006 LRP2BPQ9P2M1 347 aa3.78□□□□□ -1.8
DEPDC1B-204ENST00000509006 PCSK5Q92824 1860 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 MSCO60682 206 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 DDAH1O94760 285 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 ACO1P21399 889 aaKnown RBP3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 KCNJ6P48051 423 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 RGS19P49795 217 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 PPP2R2AP63151 447 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 SMAD2Q15796 467 aaKnown RBP3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 Q6ZSN1 163 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 C1orf210Q8IVY1 113 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 CACTINQ8WUQ7 758 aaKnown RBP3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 CLEC4DQ8WXI8 215 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 ZG16BQ96DA0 208 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 NEIL1Q96FI4 390 aaPredicted RBP3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 AJUBAQ96IF1 538 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 CHAMP1Q96JM3 812 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 CRAMP1Q96RY5 1269 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 EPN3Q9H201 632 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 GPR27Q9NS67 375 aa3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 PPARGC1AQ9UBK2 798 aaKnown RBP3.77□□□□□ -1.81
DEPDC1B-204ENST00000509006 A0A1W2PQU0 124 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 DLX3O60479 287 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 MAFKO60675 156 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 GJB6O95452 261 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 KNG1P01042 644 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 HMGB1P09429 215 aaKnown RBP3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 FGRP09769 529 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 ZNF888P0CJ79 500 aaPredicted RBP3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 FXNQ16595 210 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 HABP4Q5JVS0 413 aaKnown RBP3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 FNDC7Q5VTL7 733 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 VASNQ6EMK4 673 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 IL17DQ8TAD2 202 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 PIP4K2CQ8TBX8 421 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 PLEKHG4BQ96PX9 1271 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 JAM3Q9BX67 310 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 ZNF408Q9H9D4 720 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 CAPN10Q9HC96 672 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 DLL4Q9NR61 685 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 TELO2Q9Y4R8 837 aa3.76□□□□□ -1.81
DEPDC1B-204ENST00000509006 KRIT1O00522 736 aa3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 SLC27A2O14975 620 aa3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 PPFIA2O75334 1257 aa3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 RAD17O75943 681 aa3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 CHGBP05060 677 aa3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 SSBP05455 408 aaKnown RBP eCLIP3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 GLRBP48167 497 aa3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 GRIN1Q05586 938 aa3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 PCSK4Q6UW60 755 aa3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 RSPO2Q6UXX9 243 aaPredicted RBP3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 EEPD1Q7L9B9 569 aa3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 OTOP3Q7RTS5 596 aa3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 TRIM48Q8IWZ4 208 aa3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 UHMK1Q8TAS1 419 aaKnown RBP3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 KCTD13Q8WZ19 329 aa3.75□□□□□ -1.81
DEPDC1B-204ENST00000509006 LARP4BQ92615 738 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms