RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TREHO43280 583 aa16.92■□□□□ 0.3
UBE2D3-228ENST00000508974 NBNO60934 754 aa16.92■□□□□ 0.3
UBE2D3-228ENST00000508974 FOSP01100 380 aaPredicted RBP16.92■□□□□ 0.3
UBE2D3-228ENST00000508974 PDIA3P30101 505 aaKnown RBP16.92■□□□□ 0.3
UBE2D3-228ENST00000508974 THPOP40225 353 aa16.92■□□□□ 0.3
UBE2D3-228ENST00000508974 AKAP17AQ02040 695 aaKnown RBP16.92■□□□□ 0.3
UBE2D3-228ENST00000508974 STK3Q13188 491 aa16.92■□□□□ 0.3
UBE2D3-228ENST00000508974 GPNMBQ14956 572 aa16.92■□□□□ 0.3
UBE2D3-228ENST00000508974 PKN1Q16512 942 aa16.92■□□□□ 0.3
UBE2D3-228ENST00000508974 TRIM71Q2Q1W2 868 aaKnown RBP16.92■□□□□ 0.3
UBE2D3-228ENST00000508974 MXRA8Q9BRK3 442 aa16.92■□□□□ 0.3
UBE2D3-228ENST00000508974 PRDM12Q9H4Q4 367 aa16.92■□□□□ 0.3
UBE2D3-228ENST00000508974 SLC28A3Q9HAS3 691 aa16.92■□□□□ 0.3
UBE2D3-228ENST00000508974 KCNH7Q9NS40 1196 aa16.92■□□□□ 0.3
UBE2D3-228ENST00000508974 UNC80Q8N2C7 3258 aa16.91■□□□□ 0.3
UBE2D3-228ENST00000508974 GSTTP1A0A1W2PQM5 241 aa16.91■□□□□ 0.3
UBE2D3-228ENST00000508974 PRPF3O43395 683 aaKnown RBP16.91■□□□□ 0.3
UBE2D3-228ENST00000508974 CTSHP09668 335 aa16.91■□□□□ 0.3
UBE2D3-228ENST00000508974 ARP10275 920 aa16.91■□□□□ 0.3
UBE2D3-228ENST00000508974 ZNF76P36508 570 aa16.91■□□□□ 0.3
UBE2D3-228ENST00000508974 CLK2P49760 499 aaKnown RBP16.91■□□□□ 0.3
UBE2D3-228ENST00000508974 ARHGAP4P98171 946 aa16.91■□□□□ 0.3
UBE2D3-228ENST00000508974 TCTN1Q2MV58 587 aa16.91■□□□□ 0.3
UBE2D3-228ENST00000508974 TMCO2Q7Z6W1 182 aaPredicted RBP16.91■□□□□ 0.3
UBE2D3-228ENST00000508974 SERINC5Q86VE9 423 aa16.91■□□□□ 0.3
UBE2D3-228ENST00000508974 FBXL16Q8N461 479 aa16.91■□□□□ 0.3
UBE2D3-228ENST00000508974 MAFAQ8NHW3 353 aaPredicted RBP16.91■□□□□ 0.3
UBE2D3-228ENST00000508974 DDX39AO00148 427 aaKnown RBP16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 SREBF1P36956 1147 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 RBL2Q08999 1139 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 AP3B2Q13367 1082 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 MBTPS1Q14703 1052 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 NTRK3Q16288 839 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 PPP2R2DQ66LE6 453 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 TRAF7Q6Q0C0 670 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 RASGRP4Q8TDF6 673 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 LMBR1Q8WVP7 490 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 SEPT1Q8WYJ6 367 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 GLG1Q92896 1179 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 C6orf50Q9HD87 102 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 JPH1Q9HDC5 661 aaPredicted RBP16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 VPS54Q9P1Q0 977 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 SLC9A2Q9UBY0 812 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 SIP14410 1827 aa16.9■□□□□ 0.3
UBE2D3-228ENST00000508974 EPB41L2O43491 1005 aaKnown RBP16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 HOXC8P31273 242 aa16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 KCNJ6P48051 423 aa16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 CEP55Q53EZ4 464 aa16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 ERICH6BQ5W0A0 696 aa16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 CNKSR3Q6P9H4 555 aa16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 REXO1Q8N1G1 1221 aaKnown RBP16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 CCDC12Q8WUD4 166 aaPredicted RBP16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 SLC9A7Q96T83 725 aa16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 SDF4Q9BRK5 362 aa16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 ZMYND12Q9H0C1 365 aa16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 GLT8D2Q9H1C3 349 aa16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 PDRG1Q9NUG6 133 aa16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 PCDHA11Q9Y5I1 949 aa16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 MICAL3Q7RTP6 2002 aa16.89■□□□□ 0.29
UBE2D3-228ENST00000508974 MYO9BQ13459 2157 aa16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 RSPH10B2B2RC85 870 aa16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 MAFGO15525 162 aa16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 DTNBO60941 627 aa16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 CA3P07451 260 aa16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 RSPH10BP0C881 870 aa16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 IFNAR1P17181 557 aa16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 WDR5P61964 334 aaKnown RBP16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 IGBP1P78318 339 aa16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 DEFB103AP81534 67 aa16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 ITGB3BPQ13352 177 aaPredicted RBP16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 PPM1EQ8WY54 764 aa16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 RNF26Q9BY78 433 aaPredicted RBP16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 CERS4Q9HA82 394 aa16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 AGO4Q9HCK5 861 aaKnown RBP16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 SSUH2Q9Y2M2 353 aa16.88■□□□□ 0.29
UBE2D3-228ENST00000508974 CHD7Q9P2D1 2997 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 ESYT2A0FGR8 921 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 FAM86B1E9PN63 330 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 CPLX1O14810 134 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 BAIAP3O94812 1187 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 PARNO95453 639 aaKnown RBP16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 CXCL10P02778 98 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 FAM86B2P0C5J1 330 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 GNAT1P11488 350 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 EVCP57679 992 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 ACTR2P61160 394 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 PPFIA1Q13136 1202 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 FAM117BQ6P1L5 589 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 RUFY4Q6ZNE9 571 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 PLA2G4DQ86XP0 818 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 HERC6Q8IVU3 1022 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 ZBTB10Q96DT7 871 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 GAS2L1Q99501 681 aaPredicted RBP16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 OSBPL7Q9BZF2 842 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 TM6SF1Q9BZW5 370 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 ERAP1Q9NZ08 941 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 PRUNE2Q8WUY3 3088 aa16.87■□□□□ 0.29
UBE2D3-228ENST00000508974 MEIS1O00470 390 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 LGR5O75473 907 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 IGFBP4P22692 258 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms