RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 JAK2O60674 1132 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 KPNA6O60684 536 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 NBNO60934 754 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 PPFIA4O75335 1185 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 CCNE2O96020 404 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 IQCF3P0C7M6 154 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 SMIM10L2AP0DMW4 78 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 SMIM10L2BP0DMW5 78 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 TGFB3P10600 412 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 COL9A1P20849 921 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 SREBF1P36956 1147 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 RABGGTBP53611 331 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 TRAF1Q13077 416 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 PPIGQ13427 754 aaKnown RBP eCLIP9.9□□□□□ -0.82
SNCA-211ENST00000508895 METTL7BQ6UX53 244 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 CCDC83Q8IWF9 413 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.9□□□□□ -0.82
SNCA-211ENST00000508895 TMEM199Q8N511 208 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 ZNF713Q8N859 430 aaPredicted RBP9.9□□□□□ -0.82
SNCA-211ENST00000508895 HERVK_113Q902F9 699 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 GPRASP2Q96D09 838 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 ZMYND12Q9H0C1 365 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 SH2B1Q9NRF2 756 aaPredicted RBP9.9□□□□□ -0.82
SNCA-211ENST00000508895 KCNH7Q9NS40 1196 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 SETD4Q9NVD3 440 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 STXBP5LQ9Y2K9 1186 aa9.9□□□□□ -0.82
SNCA-211ENST00000508895 YBX2Q9Y2T7 364 aaKnown RBP9.9□□□□□ -0.82
SNCA-211ENST00000508895 CHD7Q9P2D1 2997 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 H3BRB1 525 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 M0R2N6 131 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 MEIS1O00470 390 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 STAM2O75886 525 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 CDKL5O76039 1030 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 DEXIO95424 95 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 CKBP12277 381 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 FDPSP14324 419 aaKnown RBP9.89□□□□□ -0.83
SNCA-211ENST00000508895 MARK3P27448 753 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 ADAM17P78536 824 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 ARHGAP4P98171 946 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 PTPN11Q06124 597 aaPredicted RBP9.89□□□□□ -0.83
SNCA-211ENST00000508895 SSRP1Q08945 709 aaKnown RBP9.89□□□□□ -0.83
SNCA-211ENST00000508895 ZNF618Q5T7W0 954 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 KCNV1Q6PIU1 500 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 RUFY4Q6ZNE9 571 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 TRIM22Q8IYM9 498 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 IL27Q8NEV9 243 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 LENG9Q96B70 501 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 TMX3Q96JJ7 454 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 SENP7Q9BQF6 1050 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 PBX4Q9BYU1 374 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 SEMA6BQ9H3T3 888 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 TUT1Q9H6E5 874 aaKnown RBP9.89□□□□□ -0.83
SNCA-211ENST00000508895 AGO4Q9HCK5 861 aaKnown RBP9.89□□□□□ -0.83
SNCA-211ENST00000508895 CHD9Q3L8U1 2897 aa9.89□□□□□ -0.83
SNCA-211ENST00000508895 ESYT2A0FGR8 921 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 FAM205CA6NFA0 338 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 SPDYE3A6NKU9 549 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 DDX39AO00148 427 aaKnown RBP9.88□□□□□ -0.83
SNCA-211ENST00000508895 FGBP02675 491 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 TCF7P36402 384 aaPredicted RBP9.88□□□□□ -0.83
SNCA-211ENST00000508895 SMAD3P84022 425 aaKnown RBP9.88□□□□□ -0.83
SNCA-211ENST00000508895 RBL2Q08999 1139 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 MTMR1Q13613 665 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 NEDD9Q14511 834 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 GNPTABQ3T906 1256 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 BRDTQ58F21 947 aaPredicted RBP9.88□□□□□ -0.83
SNCA-211ENST00000508895 EARS2Q5JPH6 523 aaKnown RBP9.88□□□□□ -0.83
SNCA-211ENST00000508895 MARCH8Q5T0T0 291 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 XRRA1Q6P2D8 792 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 CPLX2Q6PUV4 134 aaKnown RBP9.88□□□□□ -0.83
SNCA-211ENST00000508895 C7orf31Q8N865 590 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 OXER1Q8TDS5 423 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 LMBR1Q8WVP7 490 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 TRAPPC12Q8WVT3 735 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 ZSCAN31Q96LW9 406 aaPredicted RBP9.88□□□□□ -0.83
SNCA-211ENST00000508895 ORC3Q9UBD5 711 aaPredicted RBP9.88□□□□□ -0.83
SNCA-211ENST00000508895 KCNJ14Q9UNX9 436 aa9.88□□□□□ -0.83
SNCA-211ENST00000508895 LGR5O75473 907 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 SUPT20HL2P0C7V6 817 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 ATP4AP20648 1035 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 DNAJB2P25686 324 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 ACTR2P61160 394 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 DEFB103AP81534 67 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 AKAP17AQ02040 695 aaKnown RBP9.87□□□□□ -0.83
SNCA-211ENST00000508895 MKRN4PQ13434 485 aaPredicted RBP9.87□□□□□ -0.83
SNCA-211ENST00000508895 GRIN2CQ14957 1233 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 CEP55Q53EZ4 464 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 GPR153Q6NV75 609 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 NLRX1Q86UT6 975 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 SERINC5Q86VE9 423 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 CCDC148Q8NFR7 591 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 MYLIPQ8WY64 445 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 CDX2Q99626 313 aaPredicted RBP9.87□□□□□ -0.83
SNCA-211ENST00000508895 SEZ6LQ9BYH1 1024 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 NKX2-4Q9H2Z4 354 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 MYO7AQ13402 2215 aa9.87□□□□□ -0.83
SNCA-211ENST00000508895 PRRC2BQ5JSZ5 2229 aaKnown RBP9.87□□□□□ -0.83
SNCA-211ENST00000508895 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.86□□□□□ -0.83
SNCA-211ENST00000508895 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.86□□□□□ -0.83
SNCA-211ENST00000508895 C17orf102A2RUQ5 167 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms