RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 B8ZZF3 427 aa8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 ACOT7O00154 380 aa8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 PRRG2O14669 202 aa8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 AMY2AP04746 511 aa8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 PYGMP11217 842 aa8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 PDE6AP16499 860 aa8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 SYN1P17600 705 aa8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 AMY2BP19961 511 aa8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 BMS1Q14692 1282 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 MCTP2Q6DN12 878 aa8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 VASNQ6EMK4 673 aa8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 ARHGAP36Q6ZRI8 547 aa8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 TXNDC5Q8NBS9 432 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 DDX1Q92499 740 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 WRNIP1Q96S55 665 aa8.07□□□□□ -1.12
TOPBP1-206ENST00000508524 MAN2B1O00754 1011 aa8.06□□□□□ -1.12
TOPBP1-206ENST00000508524 EFCAB14O75071 495 aa8.06□□□□□ -1.12
TOPBP1-206ENST00000508524 SRGAP2CP0DJJ0 459 aa8.06□□□□□ -1.12
TOPBP1-206ENST00000508524 IL13P35225 146 aa8.06□□□□□ -1.12
TOPBP1-206ENST00000508524 GPR19Q15760 415 aa8.06□□□□□ -1.12
TOPBP1-206ENST00000508524 PRAMEF18Q5VWM3 479 aa8.06□□□□□ -1.12
TOPBP1-206ENST00000508524 CD276Q5ZPR3 534 aa8.06□□□□□ -1.12
TOPBP1-206ENST00000508524 C16orf59Q7L2K0 433 aa8.06□□□□□ -1.12
TOPBP1-206ENST00000508524 FERMT3Q86UX7 667 aa8.06□□□□□ -1.12
TOPBP1-206ENST00000508524 YTHDC1Q96MU7 727 aaKnown RBP8.06□□□□□ -1.12
TOPBP1-206ENST00000508524 DLL4Q9NR61 685 aa8.06□□□□□ -1.12
TOPBP1-206ENST00000508524 CATSPERZQ9NTU4 200 aa8.06□□□□□ -1.12
TOPBP1-206ENST00000508524 CROTQ9UKG9 612 aa8.06□□□□□ -1.12
TOPBP1-206ENST00000508524 ZNF561-AS1K7EIQ3 104 aa8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 RASGRP1O95267 797 aa8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 CKMP06732 381 aa8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 COL6A1P12109 1028 aa8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 CNR2P34972 360 aa8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 NFE2L2Q16236 605 aa8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 SKOR2Q2VWA4 1001 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 PHF19Q5T6S3 580 aa8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 OSTM1Q86WC4 334 aa8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 PTRH1Q86Y79 214 aaKnown RBP8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 ZC3H7AQ8IWR0 971 aaKnown RBP8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 SCLYQ96I15 445 aa8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 DRC1Q96MC2 740 aa8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 MRPL4Q9BYD3 311 aaKnown RBP8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 SFMBT1Q9UHJ3 866 aa8.05□□□□□ -1.12
TOPBP1-206ENST00000508524 CCDC163A0A0D9SF12 145 aa8.04□□□□□ -1.12
TOPBP1-206ENST00000508524 CCDC66A2RUB6 948 aa8.04□□□□□ -1.12
TOPBP1-206ENST00000508524 MROH6A6NGR9 719 aa8.04□□□□□ -1.12
TOPBP1-206ENST00000508524 FAM90A27PA6NNH2 459 aa8.04□□□□□ -1.12
TOPBP1-206ENST00000508524 CYP7B1O75881 506 aa8.04□□□□□ -1.12
TOPBP1-206ENST00000508524 JAM2P57087 298 aa8.04□□□□□ -1.12
TOPBP1-206ENST00000508524 SKIDA1Q1XH10 827 aa8.04□□□□□ -1.12
TOPBP1-206ENST00000508524 FIGNQ5HY92 759 aa8.04□□□□□ -1.12
TOPBP1-206ENST00000508524 UBXN11Q5T124 520 aa8.04□□□□□ -1.12
TOPBP1-206ENST00000508524 SMURF1Q9HCE7 757 aa8.04□□□□□ -1.12
TOPBP1-206ENST00000508524 C9orf118A6NHY6 69 aa8.03□□□□□ -1.12
TOPBP1-206ENST00000508524 KCNQ2O43526 872 aa8.03□□□□□ -1.12
TOPBP1-206ENST00000508524 PTPN1P18031 435 aaKnown RBP8.03□□□□□ -1.12
TOPBP1-206ENST00000508524 BUD31P41223 144 aaPredicted RBP8.03□□□□□ -1.12
TOPBP1-206ENST00000508524 ST5P78524 1137 aa8.03□□□□□ -1.12
TOPBP1-206ENST00000508524 PFKPQ01813 784 aa8.03□□□□□ -1.12
TOPBP1-206ENST00000508524 BRAPQ7Z569 592 aa8.03□□□□□ -1.12
TOPBP1-206ENST00000508524 NLGN4XQ8N0W4 816 aa8.03□□□□□ -1.12
TOPBP1-206ENST00000508524 UBXN4Q92575 508 aa8.03□□□□□ -1.12
TOPBP1-206ENST00000508524 MBD6Q96DN6 1003 aa8.03□□□□□ -1.12
TOPBP1-206ENST00000508524 LCORQ96JN0 433 aaPredicted RBP8.03□□□□□ -1.12
TOPBP1-206ENST00000508524 BDH2Q9BUT1 245 aa8.03□□□□□ -1.12
TOPBP1-206ENST00000508524 L2HGDHQ9H9P8 463 aa8.03□□□□□ -1.12
TOPBP1-206ENST00000508524 NCOA5Q9HCD5 579 aaKnown RBP8.03□□□□□ -1.12
TOPBP1-206ENST00000508524 ZNF839A8K0R7 811 aa8.02□□□□□ -1.13
TOPBP1-206ENST00000508524 GSTA4O15217 222 aa8.02□□□□□ -1.13
TOPBP1-206ENST00000508524 KRT15P19012 456 aa8.02□□□□□ -1.13
TOPBP1-206ENST00000508524 DNM2P50570 870 aa8.02□□□□□ -1.13
TOPBP1-206ENST00000508524 LACTBP83111 547 aaPredicted RBP8.02□□□□□ -1.13
TOPBP1-206ENST00000508524 KIAA2012Q0VF49 1180 aa8.02□□□□□ -1.13
TOPBP1-206ENST00000508524 FAM47CQ5HY64 1035 aa8.02□□□□□ -1.13
TOPBP1-206ENST00000508524 BTBD8Q5XKL5 378 aa8.02□□□□□ -1.13
TOPBP1-206ENST00000508524 FGD2Q7Z6J4 655 aa8.02□□□□□ -1.13
TOPBP1-206ENST00000508524 MAGEB10Q96LZ2 347 aaPredicted RBP8.02□□□□□ -1.13
TOPBP1-206ENST00000508524 KRTAP4-9Q9BYQ8 210 aa8.02□□□□□ -1.13
TOPBP1-206ENST00000508524 TRIM39Q9HCM9 518 aa8.02□□□□□ -1.13
TOPBP1-206ENST00000508524 COQ6Q9Y2Z9 468 aa8.02□□□□□ -1.13
TOPBP1-206ENST00000508524 ATP23Q9Y6H3 246 aa8.02□□□□□ -1.13
TOPBP1-206ENST00000508524 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 KCNK3O14649 394 aa8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 CYP1A1P04798 512 aaPredicted RBP8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 CELA3BP08861 270 aa8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 ENO2P09104 434 aaPredicted RBP8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 DBPQ10586 325 aaPredicted RBP8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 SQSTM1Q13501 440 aa8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 CRY1Q16526 586 aa8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 TRMT10BQ6PF06 316 aaKnown RBP8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 CISD2Q8N5K1 135 aaKnown RBP8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 CELF4Q9BZC1 486 aaKnown RBP8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 ZSWIM4Q9H7M6 989 aa8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 KANSL2Q9H9L4 492 aa8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 KCND1Q9NSA2 647 aa8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 RIC8BQ9NVN3 520 aa8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 ZFP69BQ9UJL9 534 aa8.01□□□□□ -1.13
TOPBP1-206ENST00000508524 TCRBV16S1A1N1A0A5B0 115 aa8□□□□□ -1.13
TOPBP1-206ENST00000508524 B4GALT3O60512 393 aa8□□□□□ -1.13
TOPBP1-206ENST00000508524 IL18BPO95998 194 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms