RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 XIRP2A4UGR9 3374 aa14.69□□□□□ -0.06
NR1I3-225ENST00000508387 LCHNA4D1U4 455 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 CXCL10P02778 98 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 NEFLP07196 543 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 ACTN1P12814 892 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 TOB2Q14106 344 aaPredicted RBP14.68□□□□□ -0.06
NR1I3-225ENST00000508387 PFKFB3Q16875 520 aaPredicted RBP14.68□□□□□ -0.06
NR1I3-225ENST00000508387 JAKMIP3Q5VZ66 844 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 PPP1R18Q6NYC8 613 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 RUFY4Q6ZNE9 571 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 HERC6Q8IVU3 1022 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 LMBR1Q8WVP7 490 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 PPM1EQ8WY54 764 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 PCYT2Q99447 389 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 MXRA8Q9BRK3 442 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 AGXT2Q9BYV1 514 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 SLC28A3Q9HAS3 691 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 PCDHA11Q9Y5I1 949 aa14.68□□□□□ -0.06
NR1I3-225ENST00000508387 MICAL3Q7RTP6 2002 aa14.67□□□□□ -0.06
NR1I3-225ENST00000508387 DLL1O00548 723 aa14.67□□□□□ -0.06
NR1I3-225ENST00000508387 DTNBO60941 627 aa14.67□□□□□ -0.06
NR1I3-225ENST00000508387 REC8O95072 547 aa14.67□□□□□ -0.06
NR1I3-225ENST00000508387 SCG2P13521 617 aa14.67□□□□□ -0.06
NR1I3-225ENST00000508387 RCAN1P53805 252 aa14.67□□□□□ -0.06
NR1I3-225ENST00000508387 CCT2P78371 535 aaKnown RBP14.67□□□□□ -0.06
NR1I3-225ENST00000508387 ADAM17P78536 824 aa14.67□□□□□ -0.06
NR1I3-225ENST00000508387 ARHGAP4P98171 946 aa14.67□□□□□ -0.06
NR1I3-225ENST00000508387 ITGB3BPQ13352 177 aaPredicted RBP14.67□□□□□ -0.06
NR1I3-225ENST00000508387 NTRK3Q16288 839 aa14.67□□□□□ -0.06
NR1I3-225ENST00000508387 CNKSR3Q6P9H4 555 aa14.67□□□□□ -0.06
NR1I3-225ENST00000508387 RASGRP4Q8TDF6 673 aa14.67□□□□□ -0.06
NR1I3-225ENST00000508387 SLC9A7Q96T83 725 aa14.67□□□□□ -0.06
NR1I3-225ENST00000508387 USP26Q9BXU7 913 aa14.67□□□□□ -0.06
NR1I3-225ENST00000508387 KCNH7Q9NS40 1196 aa14.67□□□□□ -0.06
NR1I3-225ENST00000508387 DDX39AO00148 427 aaKnown RBP14.66□□□□□ -0.06
NR1I3-225ENST00000508387 BAIAP3O94812 1187 aa14.66□□□□□ -0.06
NR1I3-225ENST00000508387 IGFBP4P22692 258 aa14.66□□□□□ -0.06
NR1I3-225ENST00000508387 CCDC85BQ15834 202 aaPredicted RBP14.66□□□□□ -0.06
NR1I3-225ENST00000508387 KRT40Q6A162 431 aa14.66□□□□□ -0.06
NR1I3-225ENST00000508387 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.66□□□□□ -0.06
NR1I3-225ENST00000508387 GAS2L1Q99501 681 aaPredicted RBP14.66□□□□□ -0.06
NR1I3-225ENST00000508387 UPF3BQ9BZI7 483 aaKnown RBP14.66□□□□□ -0.06
NR1I3-225ENST00000508387 ZNF215Q9UL58 517 aaPredicted RBP14.66□□□□□ -0.06
NR1I3-225ENST00000508387 RSPH10B2B2RC85 870 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 FAM86B1E9PN63 330 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 hCG_1984214I3L0E3 225 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 FAM86B2P0C5J1 330 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 RSPH10BP0C881 870 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 PDIA3P30101 505 aaKnown RBP14.65□□□□□ -0.06
NR1I3-225ENST00000508387 SREBF1P36956 1147 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 KCNJ6P48051 423 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 TAP1Q03518 808 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 MKRN4PQ13434 485 aaPredicted RBP14.65□□□□□ -0.06
NR1I3-225ENST00000508387 FAM117BQ6P1L5 589 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 RUFY3Q7L099 469 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 ZNF713Q8N859 430 aaPredicted RBP14.65□□□□□ -0.06
NR1I3-225ENST00000508387 DBF4BQ8NFT6 615 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 SEPT1Q8WYJ6 367 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 CDHR1Q96JP9 859 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 COL25A1Q9BXS0 654 aaPredicted RBP14.65□□□□□ -0.06
NR1I3-225ENST00000508387 SLC26A6Q9BXS9 759 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 EHMT1Q9H9B1 1298 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 AGO4Q9HCK5 861 aaKnown RBP14.65□□□□□ -0.06
NR1I3-225ENST00000508387 JPH1Q9HDC5 661 aaPredicted RBP14.65□□□□□ -0.06
NR1I3-225ENST00000508387 VPS54Q9P1Q0 977 aa14.65□□□□□ -0.06
NR1I3-225ENST00000508387 TRANK1O15050 2925 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 PRPF3O43395 683 aaKnown RBP14.64□□□□□ -0.07
NR1I3-225ENST00000508387 LGR5O75473 907 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 CCNE2O96020 404 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 IGBP1P78318 339 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 PPFIA1Q13136 1202 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 AP3B2Q13367 1082 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 GRIK4Q16099 956 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 CEP55Q53EZ4 464 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 MICALL1Q8N3F8 863 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 FBXL16Q8N461 479 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 GIMAP8Q8ND71 665 aaPredicted RBP14.64□□□□□ -0.07
NR1I3-225ENST00000508387 TRAPPC12Q8WVT3 735 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 CRYGNQ8WXF5 182 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 GLG1Q92896 1179 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 ZSWIM6Q9HCJ5 1215 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 SLC9A2Q9UBY0 812 aa14.64□□□□□ -0.07
NR1I3-225ENST00000508387 IGLV3-22A0A075B6J6 115 aa14.63□□□□□ -0.07
NR1I3-225ENST00000508387 EDIL3O43854 480 aa14.63□□□□□ -0.07
NR1I3-225ENST00000508387 TLL1O43897 1013 aa14.63□□□□□ -0.07
NR1I3-225ENST00000508387 PSMA5P28066 241 aa14.63□□□□□ -0.07
NR1I3-225ENST00000508387 ACTR2P61160 394 aa14.63□□□□□ -0.07
NR1I3-225ENST00000508387 STK3Q13188 491 aa14.63□□□□□ -0.07
NR1I3-225ENST00000508387 PLEKHG4Q58EX7 1191 aa14.63□□□□□ -0.07
NR1I3-225ENST00000508387 MARCH8Q5T0T0 291 aa14.63□□□□□ -0.07
NR1I3-225ENST00000508387 PHOSPHO2Q8TCD6 241 aa14.63□□□□□ -0.07
NR1I3-225ENST00000508387 ARNTL2Q8WYA1 636 aa14.63□□□□□ -0.07
NR1I3-225ENST00000508387 ZMYND12Q9H0C1 365 aa14.63□□□□□ -0.07
NR1I3-225ENST00000508387 PPP4R2Q9NY27 417 aa14.63□□□□□ -0.07
NR1I3-225ENST00000508387 EMSYQ7Z589 1322 aa14.63□□□□□ -0.07
NR1I3-225ENST00000508387 CCDC196A0A1B0GTZ2 297 aa14.62□□□□□ -0.07
NR1I3-225ENST00000508387 ESYT2A0FGR8 921 aa14.62□□□□□ -0.07
NR1I3-225ENST00000508387 MEIS1O00470 390 aa14.62□□□□□ -0.07
NR1I3-225ENST00000508387 PARNO95453 639 aaKnown RBP14.62□□□□□ -0.07
NR1I3-225ENST00000508387 FOSP01100 380 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms