RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 CCDC155Q8N6L0 562 aa17.12■□□□□ 0.33
TRIO-211ENST00000508343 NSUN7Q8NE18 718 aaKnown RBP17.12■□□□□ 0.33
TRIO-211ENST00000508343 CAGE1Q8TC20 777 aa17.12■□□□□ 0.33
TRIO-211ENST00000508343 TBCKQ8TEA7 893 aa17.12■□□□□ 0.33
TRIO-211ENST00000508343 SZT2Q5T011 3432 aa17.12■□□□□ 0.33
TRIO-211ENST00000508343 C17orf102A2RUQ5 167 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 IPO5O00410 1097 aaKnown RBP17.11■□□□□ 0.33
TRIO-211ENST00000508343 EDIL3O43854 480 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 ACRP10323 421 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 ZNF200P98182 395 aaPredicted RBP17.11■□□□□ 0.33
TRIO-211ENST00000508343 PTK7Q13308 1070 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 HIC1Q14526 733 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 PRR16Q569H4 304 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 TMEM240Q5SV17 173 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 PSRC1Q6PGN9 363 aaPredicted RBP17.11■□□□□ 0.33
TRIO-211ENST00000508343 ZNF365Q70YC5 407 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 GLG1Q92896 1179 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 SCLYQ96I15 445 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 LRCH3Q96II8 777 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 ZSCAN31Q96LW9 406 aaPredicted RBP17.11■□□□□ 0.33
TRIO-211ENST00000508343 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.11■□□□□ 0.331e-10■■□□□ 12.6
TRIO-211ENST00000508343 ZNF577Q9BSK1 485 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 RNPEPQ9H4A4 650 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 SMARCAD1Q9H4L7 1026 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 TBC1D22BQ9NU19 505 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 ERAP1Q9NZ08 941 aa17.11■□□□□ 0.33
TRIO-211ENST00000508343 DHX15O43143 795 aaKnown RBP17.1■□□□□ 0.33
TRIO-211ENST00000508343 LGR5O75473 907 aa17.1■□□□□ 0.33
TRIO-211ENST00000508343 ATG7O95352 703 aa17.1■□□□□ 0.33
TRIO-211ENST00000508343 IQCF3P0C7M6 154 aa17.1■□□□□ 0.33
TRIO-211ENST00000508343 GNAT1P11488 350 aa17.1■□□□□ 0.33
TRIO-211ENST00000508343 HOXC8P31273 242 aa17.1■□□□□ 0.33
TRIO-211ENST00000508343 ACTR2P61160 394 aa17.1■□□□□ 0.33
TRIO-211ENST00000508343 RABEP1Q15276 862 aa17.1■□□□□ 0.33
TRIO-211ENST00000508343 KRT25Q7Z3Z0 450 aa17.1■□□□□ 0.33
TRIO-211ENST00000508343 IL27Q8NEV9 243 aa17.1■□□□□ 0.33
TRIO-211ENST00000508343 AFAP1L1Q8TED9 768 aa17.1■□□□□ 0.33
TRIO-211ENST00000508343 ATP6V0A1Q93050 837 aa17.1■□□□□ 0.33
TRIO-211ENST00000508343 RNPC3Q96LT9 517 aaKnown RBP17.1■□□□□ 0.33
TRIO-211ENST00000508343 AZI2Q9H6S1 392 aa17.1■□□□□ 0.33
TRIO-211ENST00000508343 GJB4Q9NTQ9 266 aa17.1■□□□□ 0.33
TRIO-211ENST00000508343 SETD4Q9NVD3 440 aa17.1■□□□□ 0.33
TRIO-211ENST00000508343 JAK2O60674 1132 aa17.09■□□□□ 0.33
TRIO-211ENST00000508343 FGBP02675 491 aa17.09■□□□□ 0.33
TRIO-211ENST00000508343 RFC2P35250 354 aa17.09■□□□□ 0.33
TRIO-211ENST00000508343 RBL2Q08999 1139 aa17.09■□□□□ 0.33
TRIO-211ENST00000508343 ST3GAL1Q11201 340 aa17.09■□□□□ 0.33
TRIO-211ENST00000508343 NONOQ15233 471 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRIO-211ENST00000508343 GPR153Q6NV75 609 aa17.09■□□□□ 0.33
TRIO-211ENST00000508343 PLPPR4Q7Z2D5 763 aa17.09■□□□□ 0.33
TRIO-211ENST00000508343 SERINC5Q86VE9 423 aa17.09■□□□□ 0.33
TRIO-211ENST00000508343 DHX38Q92620 1227 aaKnown RBP17.09■□□□□ 0.33
TRIO-211ENST00000508343 LENG9Q96B70 501 aa17.09■□□□□ 0.33
TRIO-211ENST00000508343 PCYT2Q99447 389 aa17.09■□□□□ 0.33
TRIO-211ENST00000508343 LLPHQ9BRT6 129 aaKnown RBP17.09■□□□□ 0.33
TRIO-211ENST00000508343 SH2B1Q9NRF2 756 aaPredicted RBP17.09■□□□□ 0.33
TRIO-211ENST00000508343 EMSYQ7Z589 1322 aa17.09■□□□□ 0.33
TRIO-211ENST00000508343 NRCAMQ92823 1304 aa17.08■□□□□ 0.32
TRIO-211ENST00000508343 CYP3A7-CYP3A51PA0A087WV96 503 aa17.08■□□□□ 0.32
TRIO-211ENST00000508343 CCDC194A0A1B0GVG4 234 aa17.08■□□□□ 0.32
TRIO-211ENST00000508343 DDX39AO00148 427 aaKnown RBP17.08■□□□□ 0.32
TRIO-211ENST00000508343 TREHO43280 583 aa17.08■□□□□ 0.32
TRIO-211ENST00000508343 CCNE2O96020 404 aa17.08■□□□□ 0.32
TRIO-211ENST00000508343 PFKMP08237 780 aa17.08■□□□□ 0.32
TRIO-211ENST00000508343 CKBP12277 381 aa17.08■□□□□ 0.32
TRIO-211ENST00000508343 SELPP16109 830 aa17.08■□□□□ 0.32
TRIO-211ENST00000508343 CYP3A7P24462 503 aa17.08■□□□□ 0.32
TRIO-211ENST00000508343 ABHD15Q6UXT9 468 aa17.08■□□□□ 0.32
TRIO-211ENST00000508343 CCDC83Q8IWF9 413 aa17.08■□□□□ 0.32
TRIO-211ENST00000508343 UIMC1Q96RL1 719 aa17.08■□□□□ 0.32
TRIO-211ENST00000508343 IGKV6D-21A0A0A0MT36 114 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 MSH4O15457 936 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 PARNO95453 639 aaKnown RBP17.07■□□□□ 0.32
TRIO-211ENST00000508343 MARK3P27448 753 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 STAT5BP51692 787 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 ADAM17P78536 824 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 INF2Q27J81 1249 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 TRIM71Q2Q1W2 868 aaKnown RBP17.07■□□□□ 0.32
TRIO-211ENST00000508343 Q4G0T1 1027 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 RASIP1Q5U651 963 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 ZNF746Q6NUN9 644 aaPredicted RBP17.07■□□□□ 0.32
TRIO-211ENST00000508343 MOXD1Q6UVY6 613 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 DEFB128Q7Z7B8 93 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 OXER1Q8TDS5 423 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 HERVK_113Q902F9 699 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 TNPO1Q92973 898 aaKnown RBP17.07■□□□□ 0.32
TRIO-211ENST00000508343 VWCEQ96DN2 955 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 BRMS1Q9HCU9 246 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 GTF3C3Q9Y5Q9 886 aa17.07■□□□□ 0.32
TRIO-211ENST00000508343 LAMA2P24043 3122 aaKnown RBP17.06■□□□□ 0.32
TRIO-211ENST00000508343 ST18O60284 1047 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 SLC34A2O95436 690 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 KRT2P35908 639 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 SLC26A2P50443 739 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 SMAD3P84022 425 aaKnown RBP17.06■□□□□ 0.32
TRIO-211ENST00000508343 KRT76Q01546 638 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 PPFIA1Q13136 1202 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 TRIM29Q14134 588 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 MIS18BP1Q6P0N0 1132 aa17.06■□□□□ 0.32
TRIO-211ENST00000508343 LRRC8DQ7L1W4 858 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms