RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 MICALL1Q8N3F8 863 aa14.93□□□□□ -0.02
HMGCS1-205ENST00000508319 GIMAP8Q8ND71 665 aaPredicted RBP14.93□□□□□ -0.02
HMGCS1-205ENST00000508319 LMBR1Q8WVP7 490 aa14.93□□□□□ -0.02
HMGCS1-205ENST00000508319 ATXN2LQ8WWM7 1075 aaKnown RBP14.93□□□□□ -0.02
HMGCS1-205ENST00000508319 CDHR1Q96JP9 859 aa14.93□□□□□ -0.02
HMGCS1-205ENST00000508319 SETD4Q9NVD3 440 aa14.93□□□□□ -0.02
HMGCS1-205ENST00000508319 RBM28Q9NW13 759 aaKnown RBP14.93□□□□□ -0.02
HMGCS1-205ENST00000508319 UBIAD1Q9Y5Z9 338 aa14.93□□□□□ -0.02
HMGCS1-205ENST00000508319 MTCH2Q9Y6C9 303 aa14.93□□□□□ -0.02
HMGCS1-205ENST00000508319 SPDYE3A6NKU9 549 aa14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 ZBTB43O43298 467 aa14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 LPXNO60711 386 aa14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 CTSHP09668 335 aa14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 TCF7P36402 384 aaPredicted RBP14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 MTMR1Q13613 665 aa14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 IKBKEQ14164 716 aa14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 RTN1Q16799 776 aa14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 PLEKHG4Q58EX7 1191 aa14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 UTP14CQ5TAP6 766 aaKnown RBP14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 KRT40Q6A162 431 aa14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 SYNE3Q6ZMZ3 975 aa14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 OSBPL7Q9BZF2 842 aa14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 PCDHA6Q9UN73 950 aa14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 PCDHA8Q9Y5H6 950 aa14.92□□□□□ -0.02
HMGCS1-205ENST00000508319 GNAT1P11488 350 aa14.91□□□□□ -0.02
HMGCS1-205ENST00000508319 NAPAP54920 295 aa14.91□□□□□ -0.02
HMGCS1-205ENST00000508319 ARHGAP4P98171 946 aa14.91□□□□□ -0.02
HMGCS1-205ENST00000508319 GRB10Q13322 594 aa14.91□□□□□ -0.02
HMGCS1-205ENST00000508319 KRT32Q14532 448 aa14.91□□□□□ -0.02
HMGCS1-205ENST00000508319 PPP1R18Q6NYC8 613 aa14.91□□□□□ -0.02
HMGCS1-205ENST00000508319 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.91□□□□□ -0.02
HMGCS1-205ENST00000508319 DBF4BQ8NFT6 615 aa14.91□□□□□ -0.02
HMGCS1-205ENST00000508319 ASB2Q96Q27 587 aa14.91□□□□□ -0.02
HMGCS1-205ENST00000508319 RAD9AQ99638 391 aa14.91□□□□□ -0.02
HMGCS1-205ENST00000508319 ZBED2Q9BTP6 218 aa14.91□□□□□ -0.02
HMGCS1-205ENST00000508319 RIC8AQ9NPQ8 531 aa14.91□□□□□ -0.02
HMGCS1-205ENST00000508319 FAM217BQ9NTX9 383 aaPredicted RBP14.91□□□□□ -0.02
HMGCS1-205ENST00000508319 PKD2L1Q9P0L9 805 aa14.91□□□□□ -0.02
HMGCS1-205ENST00000508319 KLF18A0A0U1RQI7 1052 aa14.9□□□□□ -0.02
HMGCS1-205ENST00000508319 GSTTP1A0A1W2PQM5 241 aa14.9□□□□□ -0.02
HMGCS1-205ENST00000508319 GOLGA8AA7E2F4 631 aa14.9□□□□□ -0.02
HMGCS1-205ENST00000508319 GOLGA8BA8MQT2 603 aa14.9□□□□□ -0.02
HMGCS1-205ENST00000508319 hCG_1984214I3L0E3 225 aa14.9□□□□□ -0.02
HMGCS1-205ENST00000508319 GTPBP6O43824 516 aaPredicted RBP14.9□□□□□ -0.02
HMGCS1-205ENST00000508319 CDC27P30260 824 aa14.9□□□□□ -0.02
HMGCS1-205ENST00000508319 RCAN1P53805 252 aa14.9□□□□□ -0.02
HMGCS1-205ENST00000508319 TEX2Q8IWB9 1127 aa14.9□□□□□ -0.02
HMGCS1-205ENST00000508319 ZNF713Q8N859 430 aaPredicted RBP14.9□□□□□ -0.02
HMGCS1-205ENST00000508319 PGBD1Q96JS3 809 aa14.9□□□□□ -0.02
HMGCS1-205ENST00000508319 JADE2Q9NQC1 790 aa14.9□□□□□ -0.02
HMGCS1-205ENST00000508319 COL4A6Q14031 1691 aa14.9□□□□□ -0.02
HMGCS1-205ENST00000508319 NRCAMQ92823 1304 aa14.9□□□□□ -0.02
HMGCS1-205ENST00000508319 LINC01553A4QN01 128 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 STXBP3O00186 592 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 CPA1P15085 419 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 MARK3P27448 753 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 MRPS5P82675 430 aaKnown RBP14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 FAM117BQ6P1L5 589 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 RUFY4Q6ZNE9 571 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 MYOCDQ8IZQ8 938 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 CYP2W1Q8TAV3 490 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 GDPD5Q8WTR4 605 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 SEPT1Q8WYJ6 367 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 KCNB2Q92953 911 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 EHMT1Q9H9B1 1298 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 KCNH7Q9NS40 1196 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 BARHL2Q9NY43 387 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 ERAP1Q9NZ08 941 aa14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 V9GY48 417 aaPredicted RBP14.89□□□□□ -0.03
HMGCS1-205ENST00000508319 NID2Q14112 1375 aa14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 MAFGO15525 162 aa14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 HMGB1P09429 215 aaKnown RBP14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 CLK2P49760 499 aaKnown RBP14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 ADCY7P51828 1080 aa14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 ERVK-21P61565 698 aa14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 HTRA4P83105 476 aaPredicted RBP14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 TFF2Q03403 129 aa14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 PPFIA1Q13136 1202 aa14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 FAM26DQ5JW98 314 aa14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 RPAINQ86UA6 219 aa14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 SEPT8Q92599 483 aa14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 ANO3Q9BYT9 981 aa14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 TSPYL2Q9H2G4 693 aaPredicted RBP14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 JPH1Q9HDC5 661 aaPredicted RBP14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 TUBE1Q9UJT0 475 aa14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 MTUS1Q9ULD2 1270 aa14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 INSL6Q9Y581 213 aa14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 NLRC5Q86WI3 1866 aa14.88□□□□□ -0.03
HMGCS1-205ENST00000508319 TCF20Q9UGU0 1960 aaKnown RBP14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 MBLAC1A4D2B0 266 aaPredicted RBP14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 FOSP01100 380 aaPredicted RBP14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 CHRNA1P02708 482 aa14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 AMHP03971 560 aa14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 HSPA4P34932 840 aa14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 ITGB3BPQ13352 177 aaPredicted RBP14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 AP3B2Q13367 1082 aa14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 GRIK4Q16099 956 aa14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 TAF2Q6P1X5 1199 aa14.87□□□□□ -0.03
HMGCS1-205ENST00000508319 SP7Q8TDD2 431 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms