RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ZDHHC14Q8IZN3 488 aa7.58□□□□□ -1.2
DHFR-204ENST00000508282 TRIM39Q9HCM9 518 aa7.58□□□□□ -1.2
DHFR-204ENST00000508282 SRPK3Q9UPE1 567 aa7.58□□□□□ -1.2
DHFR-204ENST00000508282 ZNF561-AS1K7EIQ3 104 aa7.57□□□□□ -1.2
DHFR-204ENST00000508282 ACOT7O00154 380 aa7.57□□□□□ -1.2
DHFR-204ENST00000508282 MAN2B1O00754 1011 aa7.57□□□□□ -1.2
DHFR-204ENST00000508282 RAPGEF3O95398 923 aa7.57□□□□□ -1.2
DHFR-204ENST00000508282 KRT15P19012 456 aa7.57□□□□□ -1.2
DHFR-204ENST00000508282 JAM2P57087 298 aa7.57□□□□□ -1.2
DHFR-204ENST00000508282 ST5P78524 1137 aa7.57□□□□□ -1.2
DHFR-204ENST00000508282 ZNF761Q86XN6 746 aaPredicted RBP7.57□□□□□ -1.2
DHFR-204ENST00000508282 PTRH1Q86Y79 214 aaKnown RBP7.57□□□□□ -1.2
DHFR-204ENST00000508282 MAGEB10Q96LZ2 347 aaPredicted RBP7.57□□□□□ -1.2
DHFR-204ENST00000508282 CLUHP3Q96NS8 147 aa7.57□□□□□ -1.2
DHFR-204ENST00000508282 TMEM209Q96SK2 561 aa7.57□□□□□ -1.2
DHFR-204ENST00000508282 TCRBV16S1A1N1A0A5B0 115 aa7.56□□□□□ -1.2
DHFR-204ENST00000508282 PLD2O14939 933 aa7.56□□□□□ -1.2
DHFR-204ENST00000508282 KCNA6P17658 529 aa7.56□□□□□ -1.2
DHFR-204ENST00000508282 DNM2P50570 870 aa7.56□□□□□ -1.2
DHFR-204ENST00000508282 CRY1Q16526 586 aa7.56□□□□□ -1.2
DHFR-204ENST00000508282 FAM47CQ5HY64 1035 aa7.56□□□□□ -1.2
DHFR-204ENST00000508282 NT5DC1Q5TFE4 455 aa7.56□□□□□ -1.2
DHFR-204ENST00000508282 ADAMTS17Q8TE56 1095 aa7.56□□□□□ -1.2
DHFR-204ENST00000508282 CLIC6Q96NY7 704 aa7.56□□□□□ -1.2
DHFR-204ENST00000508282 SMURF1Q9HCE7 757 aa7.56□□□□□ -1.2
DHFR-204ENST00000508282 COQ6Q9Y2Z9 468 aa7.56□□□□□ -1.2
DHFR-204ENST00000508282 FAM90A27PA6NNH2 459 aa7.55□□□□□ -1.2
DHFR-204ENST00000508282 DDX3XO00571 662 aaKnown RBP eCLIP7.55□□□□□ -1.21e-12■□□□□ 8.6
DHFR-204ENST00000508282 GSTA4O15217 222 aa7.55□□□□□ -1.2
DHFR-204ENST00000508282 NOBOXO60393 691 aa7.55□□□□□ -1.2
DHFR-204ENST00000508282 ZNF28P17035 718 aa7.55□□□□□ -1.2
DHFR-204ENST00000508282 MLLT6P55198 1093 aaPredicted RBP7.55□□□□□ -1.2
DHFR-204ENST00000508282 LACTBP83111 547 aaPredicted RBP7.55□□□□□ -1.2
DHFR-204ENST00000508282 CD276Q5ZPR3 534 aa7.55□□□□□ -1.2
DHFR-204ENST00000508282 ABHD17CQ6PCB6 329 aa7.55□□□□□ -1.2
DHFR-204ENST00000508282 NLGN4XQ8N0W4 816 aa7.55□□□□□ -1.2
DHFR-204ENST00000508282 DTX3Q8N9I9 347 aa7.55□□□□□ -1.2
DHFR-204ENST00000508282 RNPC3Q96LT9 517 aaKnown RBP7.55□□□□□ -1.2
DHFR-204ENST00000508282 TMEM260Q9NX78 707 aa7.55□□□□□ -1.2
DHFR-204ENST00000508282 KCNK3O14649 394 aa7.54□□□□□ -1.2
DHFR-204ENST00000508282 PPP1R12AO14974 1030 aaPredicted RBP7.54□□□□□ -1.2
DHFR-204ENST00000508282 PTPN1P18031 435 aaKnown RBP7.54□□□□□ -1.2
DHFR-204ENST00000508282 CTSWP56202 376 aa7.54□□□□□ -1.2
DHFR-204ENST00000508282 FIGNQ5HY92 759 aa7.54□□□□□ -1.2
DHFR-204ENST00000508282 PHF19Q5T6S3 580 aa7.54□□□□□ -1.2
DHFR-204ENST00000508282 BTBD8Q5XKL5 378 aa7.54□□□□□ -1.2
DHFR-204ENST00000508282 VASNQ6EMK4 673 aa7.54□□□□□ -1.2
DHFR-204ENST00000508282 LILRA6Q6PI73 481 aa7.54□□□□□ -1.2
DHFR-204ENST00000508282 CISD2Q8N5K1 135 aaKnown RBP7.54□□□□□ -1.2
DHFR-204ENST00000508282 CELF4Q9BZC1 486 aaKnown RBP7.54□□□□□ -1.2
DHFR-204ENST00000508282 ADAM7Q9H2U9 754 aa7.54□□□□□ -1.2
DHFR-204ENST00000508282 DLL4Q9NR61 685 aa7.54□□□□□ -1.2
DHFR-204ENST00000508282 RTEL1Q9NZ71 1219 aa7.54□□□□□ -1.2
DHFR-204ENST00000508282 CROTQ9UKG9 612 aa7.54□□□□□ -1.2
DHFR-204ENST00000508282 ATP23Q9Y6H3 246 aa7.54□□□□□ -1.2
DHFR-204ENST00000508282 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.53□□□□□ -1.2
DHFR-204ENST00000508282 ESYT3A0FGR9 886 aa7.53□□□□□ -1.2
DHFR-204ENST00000508282 KRTAP9-7A8MTY7 169 aa7.53□□□□□ -1.2
DHFR-204ENST00000508282 GJA9P57773 515 aa7.53□□□□□ -1.2
DHFR-204ENST00000508282 RGL3Q3MIN7 710 aa7.53□□□□□ -1.2
DHFR-204ENST00000508282 FNDC3BQ53EP0 1204 aaKnown RBP7.53□□□□□ -1.2
DHFR-204ENST00000508282 PRAMEF18Q5VWM3 479 aa7.53□□□□□ -1.2
DHFR-204ENST00000508282 MCTP2Q6DN12 878 aa7.53□□□□□ -1.2
DHFR-204ENST00000508282 OVCH1Q7RTY7 1134 aa7.53□□□□□ -1.2
DHFR-204ENST00000508282 FRMD5Q7Z6J6 570 aa7.53□□□□□ -1.2
DHFR-204ENST00000508282 USP40Q9NVE5 1235 aa7.53□□□□□ -1.2
DHFR-204ENST00000508282 ENO2P09104 434 aaPredicted RBP7.52□□□□□ -1.21
DHFR-204ENST00000508282 COL6A1P12109 1028 aa7.52□□□□□ -1.21
DHFR-204ENST00000508282 IL13P35225 146 aa7.52□□□□□ -1.21
DHFR-204ENST00000508282 PFKPQ01813 784 aa7.52□□□□□ -1.21
DHFR-204ENST00000508282 SKIDA1Q1XH10 827 aa7.52□□□□□ -1.21
DHFR-204ENST00000508282 FAM26FQ5R3K3 315 aa7.52□□□□□ -1.21
DHFR-204ENST00000508282 FSTL4Q6MZW2 842 aa7.52□□□□□ -1.21
DHFR-204ENST00000508282 HHIPL2Q6UWX4 724 aa7.52□□□□□ -1.21
DHFR-204ENST00000508282 TXNDC5Q8NBS9 432 aaKnown RBP7.52□□□□□ -1.21
DHFR-204ENST00000508282 ZCCHC14Q8WYQ9 949 aaKnown RBP7.52□□□□□ -1.21
DHFR-204ENST00000508282 WRNIP1Q96S55 665 aa7.52□□□□□ -1.21
DHFR-204ENST00000508282 RIC8BQ9NVN3 520 aa7.52□□□□□ -1.21
DHFR-204ENST00000508282 ZNF839A8K0R7 811 aa7.51□□□□□ -1.21
DHFR-204ENST00000508282 ASMTLO95671 621 aa7.51□□□□□ -1.21
DHFR-204ENST00000508282 APPP05067 770 aa7.51□□□□□ -1.21
DHFR-204ENST00000508282 DBPQ10586 325 aaPredicted RBP7.51□□□□□ -1.21
DHFR-204ENST00000508282 SEC23AQ15436 765 aa7.51□□□□□ -1.21
DHFR-204ENST00000508282 IGSF22Q8N9C0 903 aa7.51□□□□□ -1.21
DHFR-204ENST00000508282 YTHDC1Q96MU7 727 aaKnown RBP7.51□□□□□ -1.21
DHFR-204ENST00000508282 DUSP10Q9Y6W6 482 aa7.51□□□□□ -1.21
DHFR-204ENST00000508282 CLASP2O75122 1294 aaKnown RBP7.5□□□□□ -1.21
DHFR-204ENST00000508282 CYP7B1O75881 506 aa7.5□□□□□ -1.21
DHFR-204ENST00000508282 DNAJC8O75937 253 aaPredicted RBP7.5□□□□□ -1.21
DHFR-204ENST00000508282 C4BPAP04003 597 aaKnown RBP7.5□□□□□ -1.21
DHFR-204ENST00000508282 GJA4P35212 333 aa7.5□□□□□ -1.21
DHFR-204ENST00000508282 NFIXQ14938 502 aa7.5□□□□□ -1.21
DHFR-204ENST00000508282 TM4SF20Q53R12 229 aa7.5□□□□□ -1.21
DHFR-204ENST00000508282 CPZQ66K79 652 aa7.5□□□□□ -1.21
DHFR-204ENST00000508282 EP400NLQ6ZTU2 488 aa7.5□□□□□ -1.21
DHFR-204ENST00000508282 NOSTRINQ8IVI9 506 aa7.5□□□□□ -1.21
DHFR-204ENST00000508282 DDX1Q92499 740 aaKnown RBP7.5□□□□□ -1.21
DHFR-204ENST00000508282 TEPSINQ96N21 525 aa7.5□□□□□ -1.21
DHFR-204ENST00000508282 L2HGDHQ9H9P8 463 aa7.5□□□□□ -1.21
DHFR-204ENST00000508282 SLC39A2Q9NP94 309 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms