RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 TBX3O15119 743 aa16.97■□□□□ 0.31
RNF4-210ENST00000508235 GAS7O60861 476 aa16.97■□□□□ 0.31
RNF4-210ENST00000508235 CHMP4BP1P59074 171 aa16.97■□□□□ 0.31
RNF4-210ENST00000508235 KIAA0753Q2KHM9 967 aa16.97■□□□□ 0.31
RNF4-210ENST00000508235 FAM47CQ5HY64 1035 aa16.97■□□□□ 0.31
RNF4-210ENST00000508235 EARS2Q5JPH6 523 aaKnown RBP16.97■□□□□ 0.31
RNF4-210ENST00000508235 LRCH2Q5VUJ6 765 aa16.97■□□□□ 0.31
RNF4-210ENST00000508235 MIS18BP1Q6P0N0 1132 aa16.97■□□□□ 0.31
RNF4-210ENST00000508235 NOSTRINQ8IVI9 506 aa16.97■□□□□ 0.31
RNF4-210ENST00000508235 SMAP1Q8IYB5 467 aaPredicted RBP16.97■□□□□ 0.31
RNF4-210ENST00000508235 SLC5A5Q92911 643 aa16.97■□□□□ 0.31
RNF4-210ENST00000508235 TNPO1Q92973 898 aaKnown RBP16.97■□□□□ 0.31
RNF4-210ENST00000508235 SMARCAD1Q9H4L7 1026 aa16.97■□□□□ 0.31
RNF4-210ENST00000508235 ERAP1Q9NZ08 941 aa16.97■□□□□ 0.31
RNF4-210ENST00000508235 NOL7Q9UMY1 257 aaKnown RBP16.97■□□□□ 0.31
RNF4-210ENST00000508235 EMSYQ7Z589 1322 aa16.96■□□□□ 0.31
RNF4-210ENST00000508235 DHX15O43143 795 aaKnown RBP16.96■□□□□ 0.31
RNF4-210ENST00000508235 MARCH6O60337 910 aa16.96■□□□□ 0.31
RNF4-210ENST00000508235 ATG7O95352 703 aa16.96■□□□□ 0.31
RNF4-210ENST00000508235 BAG4O95429 457 aaKnown RBP16.96■□□□□ 0.31
RNF4-210ENST00000508235 HSP90AA1P07900 732 aaKnown RBP16.96■□□□□ 0.31
RNF4-210ENST00000508235 U2AF2P26368 475 aaKnown RBP eCLIP16.96■□□□□ 0.31
RNF4-210ENST00000508235 SFNP31947 248 aa16.96■□□□□ 0.31
RNF4-210ENST00000508235 TRAPPC10P48553 1259 aa16.96■□□□□ 0.31
RNF4-210ENST00000508235 FAAP100Q0VG06 881 aa16.96■□□□□ 0.31
RNF4-210ENST00000508235 ORC2Q13416 577 aaPredicted RBP16.96■□□□□ 0.31
RNF4-210ENST00000508235 UTP14CQ5TAP6 766 aaKnown RBP16.96■□□□□ 0.31
RNF4-210ENST00000508235 FAM160B1Q5W0V3 765 aa16.96■□□□□ 0.31
RNF4-210ENST00000508235 SLFN12Q8IYM2 578 aa16.96■□□□□ 0.31
RNF4-210ENST00000508235 GLG1Q92896 1179 aa16.96■□□□□ 0.31
RNF4-210ENST00000508235 PRDM5Q9NQX1 630 aaPredicted RBP16.96■□□□□ 0.31
RNF4-210ENST00000508235 TMEM39AQ9NV64 488 aa16.96■□□□□ 0.31
RNF4-210ENST00000508235 KAT6AQ92794 2004 aa16.96■□□□□ 0.3
RNF4-210ENST00000508235 MYH9P35579 1960 aaKnown RBP16.95■□□□□ 0.3
RNF4-210ENST00000508235 PDE4DIPQ5VU43 2346 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 FAM205CA6NFA0 338 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 H0YGN5 161 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 SLC37A4O43826 429 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 B4GALT4O60513 344 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 LGR5O75473 907 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 CD4P01730 458 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 SLC26A2P50443 739 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 JAK3P52333 1124 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 PRPF38BQ5VTL8 546 aaKnown RBP16.95■□□□□ 0.3
RNF4-210ENST00000508235 MCTP1Q6DN14 999 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 RDM1Q8NG50 284 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 ETNPPLQ8TBG4 499 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 PDLIM7Q9NR12 457 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 GTF2IRD1Q9UHL9 959 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 NOD1Q9Y239 953 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 SAMM50Q9Y512 469 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 PCDHA10Q9Y5I2 948 aa16.95■□□□□ 0.3
RNF4-210ENST00000508235 WDR64B1ANS9 1081 aa16.94■□□□□ 0.3
RNF4-210ENST00000508235 BACH1O14867 736 aa16.94■□□□□ 0.3
RNF4-210ENST00000508235 KIAA0355O15063 1070 aa16.94■□□□□ 0.3
RNF4-210ENST00000508235 PSMD10O75832 226 aa16.94■□□□□ 0.3
RNF4-210ENST00000508235 CCNE2O96020 404 aa16.94■□□□□ 0.3
RNF4-210ENST00000508235 PSAPP07602 524 aa16.94■□□□□ 0.3
RNF4-210ENST00000508235 GNAT1P11488 350 aa16.94■□□□□ 0.3
RNF4-210ENST00000508235 STAT5BP51692 787 aa16.94■□□□□ 0.3
RNF4-210ENST00000508235 ABHD15Q6UXT9 468 aa16.94■□□□□ 0.3
RNF4-210ENST00000508235 PLPPR4Q7Z2D5 763 aa16.94■□□□□ 0.3
RNF4-210ENST00000508235 TRIM50Q86XT4 487 aa16.94■□□□□ 0.3
RNF4-210ENST00000508235 LBHD1Q9BQE6 289 aaPredicted RBP16.94■□□□□ 0.3
RNF4-210ENST00000508235 KCNMB3Q9NPA1 279 aa16.94■□□□□ 0.3
RNF4-210ENST00000508235 HDAC6Q9UBN7 1215 aa16.94■□□□□ 0.3
RNF4-210ENST00000508235 ZMYND8Q9ULU4 1186 aaPredicted RBP16.94■□□□□ 0.3
RNF4-210ENST00000508235 WDR81Q562E7 1941 aa16.94■□□□□ 0.3
RNF4-210ENST00000508235 IGKV6D-21A0A0A0MT36 114 aa16.93■□□□□ 0.3
RNF4-210ENST00000508235 NEMFO60524 1076 aa16.93■□□□□ 0.3
RNF4-210ENST00000508235 PDIA4P13667 645 aaKnown RBP16.93■□□□□ 0.3
RNF4-210ENST00000508235 RAG1P15918 1043 aa16.93■□□□□ 0.3
RNF4-210ENST00000508235 SYN1P17600 705 aa16.93■□□□□ 0.3
RNF4-210ENST00000508235 CALCRLQ16602 461 aa16.93■□□□□ 0.3
RNF4-210ENST00000508235 PTGISQ16647 500 aa16.93■□□□□ 0.3
RNF4-210ENST00000508235 AFAP1L1Q8TED9 768 aa16.93■□□□□ 0.3
RNF4-210ENST00000508235 UIMC1Q96RL1 719 aa16.93■□□□□ 0.3
RNF4-210ENST00000508235 TRPV6Q9H1D0 765 aa16.93■□□□□ 0.3
RNF4-210ENST00000508235 ZNF302Q9NR11 478 aa16.93■□□□□ 0.3
RNF4-210ENST00000508235 TRMT13Q9NUP7 481 aaKnown RBP16.93■□□□□ 0.3
RNF4-210ENST00000508235 TELO2Q9Y4R8 837 aa16.93■□□□□ 0.3
RNF4-210ENST00000508235 LTBP2Q14767 1821 aa16.92■□□□□ 0.3
RNF4-210ENST00000508235 C17orf102A2RUQ5 167 aa16.92■□□□□ 0.3
RNF4-210ENST00000508235 KIF28PB7ZC32 967 aa16.92■□□□□ 0.3
RNF4-210ENST00000508235 ATP2B1P20020 1258 aa16.92■□□□□ 0.3
RNF4-210ENST00000508235 MCM7P33993 719 aa16.92■□□□□ 0.3
RNF4-210ENST00000508235 RILPL1Q5EBL4 403 aa16.92■□□□□ 0.3
RNF4-210ENST00000508235 TTC38Q5R3I4 469 aa16.92■□□□□ 0.3
RNF4-210ENST00000508235 POTEDQ86YR6 584 aa16.92■□□□□ 0.3
RNF4-210ENST00000508235 CCDC155Q8N6L0 562 aa16.92■□□□□ 0.3
RNF4-210ENST00000508235 DISC1Q9NRI5 854 aa16.92■□□□□ 0.3
RNF4-210ENST00000508235 TBX21Q9UL17 535 aa16.92■□□□□ 0.3
RNF4-210ENST00000508235 NRCAMQ92823 1304 aa16.92■□□□□ 0.3
RNF4-210ENST00000508235 MKI67P46013 3256 aaKnown RBP16.91■□□□□ 0.3
RNF4-210ENST00000508235 TRIM43BA6NCK2 446 aa16.91■□□□□ 0.3
RNF4-210ENST00000508235 TIMP1P01033 207 aa16.91■□□□□ 0.3
RNF4-210ENST00000508235 SMIM10L2AP0DMW4 78 aa16.91■□□□□ 0.3
RNF4-210ENST00000508235 SMIM10L2BP0DMW5 78 aa16.91■□□□□ 0.3
RNF4-210ENST00000508235 PPP2R5CQ13362 524 aa16.91■□□□□ 0.3
RNF4-210ENST00000508235 BFSP2Q13515 415 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms