RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 MFSD5Q6N075 450 aa25.32■■□□□ 1.64
SNCB-204ENST00000508006 LENG9Q96B70 501 aa25.32■■□□□ 1.64
SNCB-204ENST00000508006 AP5M1Q9H0R1 490 aa25.32■■□□□ 1.64
SNCB-204ENST00000508006 DDX25Q9UHL0 483 aaKnown RBP25.32■■□□□ 1.64
SNCB-204ENST00000508006 VCANP13611 3396 aa25.32■■□□□ 1.64
SNCB-204ENST00000508006 NFASCO94856 1347 aa25.32■■□□□ 1.64
SNCB-204ENST00000508006 TBX3O15119 743 aa25.31■■□□□ 1.64
SNCB-204ENST00000508006 UBA1P22314 1058 aaKnown RBP25.31■■□□□ 1.64
SNCB-204ENST00000508006 PPIGQ13427 754 aaKnown RBP eCLIP25.31■■□□□ 1.64
SNCB-204ENST00000508006 CELF3Q5SZQ8 465 aaKnown RBP25.31■■□□□ 1.64
SNCB-204ENST00000508006 CCSAPQ6IQ19 270 aaPredicted RBP25.31■■□□□ 1.64
SNCB-204ENST00000508006 TLK2Q86UE8 772 aa25.31■■□□□ 1.64
SNCB-204ENST00000508006 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.31■■□□□ 1.64
SNCB-204ENST00000508006 ZNF576Q9H609 170 aa25.31■■□□□ 1.64
SNCB-204ENST00000508006 AGO4Q9HCK5 861 aaKnown RBP25.31■■□□□ 1.64
SNCB-204ENST00000508006 TBC1D22BQ9NU19 505 aa25.31■■□□□ 1.64
SNCB-204ENST00000508006 MYH15Q9Y2K3 1946 aa25.31■■□□□ 1.64
SNCB-204ENST00000508006 MYADML2A6NDP7 307 aa25.3■■□□□ 1.64
SNCB-204ENST00000508006 IPO5O00410 1097 aaKnown RBP25.3■■□□□ 1.64
SNCB-204ENST00000508006 TLR3O15455 904 aaKnown RBP25.3■■□□□ 1.64
SNCB-204ENST00000508006 TDP2O95551 362 aa25.3■■□□□ 1.64
SNCB-204ENST00000508006 ARP10275 920 aa25.3■■□□□ 1.64
SNCB-204ENST00000508006 KCNA2P16389 499 aa25.3■■□□□ 1.64
SNCB-204ENST00000508006 CST5P28325 142 aaPredicted RBP25.3■■□□□ 1.64
SNCB-204ENST00000508006 SP2Q02086 613 aa25.3■■□□□ 1.64
SNCB-204ENST00000508006 DHX37Q8IY37 1157 aaKnown RBP25.3■■□□□ 1.64
SNCB-204ENST00000508006 TMEM199Q8N511 208 aa25.3■■□□□ 1.64
SNCB-204ENST00000508006 TIFAQ96CG3 184 aa25.3■■□□□ 1.64
SNCB-204ENST00000508006 FAM20AQ96MK3 541 aa25.3■■□□□ 1.64
SNCB-204ENST00000508006 CDH23Q9H251 3354 aa25.29■■□□□ 1.64
SNCB-204ENST00000508006 A0A0U1RQG5 324 aaPredicted RBP25.29■■□□□ 1.64
SNCB-204ENST00000508006 ZSCAN22P10073 491 aaPredicted RBP25.29■■□□□ 1.64
SNCB-204ENST00000508006 ARHGAP1Q07960 439 aa25.29■■□□□ 1.64
SNCB-204ENST00000508006 RESTQ13127 1097 aa25.29■■□□□ 1.64
SNCB-204ENST00000508006 BRDTQ58F21 947 aaPredicted RBP25.29■■□□□ 1.64
SNCB-204ENST00000508006 TTC38Q5R3I4 469 aa25.29■■□□□ 1.64
SNCB-204ENST00000508006 MYSM1Q5VVJ2 828 aa25.29■■□□□ 1.64
SNCB-204ENST00000508006 METTL7BQ6UX53 244 aa25.29■■□□□ 1.64
SNCB-204ENST00000508006 RIT2Q99578 217 aa25.29■■□□□ 1.64
SNCB-204ENST00000508006 SDF4Q9BRK5 362 aa25.29■■□□□ 1.64
SNCB-204ENST00000508006 ZNF577Q9BSK1 485 aa25.29■■□□□ 1.64
SNCB-204ENST00000508006 TBX21Q9UL17 535 aa25.29■■□□□ 1.64
SNCB-204ENST00000508006 DOCK5Q9H7D0 1870 aa25.29■■□□□ 1.64
SNCB-204ENST00000508006 ARVCFO00192 962 aa25.28■■□□□ 1.64
SNCB-204ENST00000508006 DYNC1LI2O43237 492 aaPredicted RBP25.28■■□□□ 1.64
SNCB-204ENST00000508006 ATP9AO75110 1047 aa25.28■■□□□ 1.64
SNCB-204ENST00000508006 GGPS1O95749 300 aa25.28■■□□□ 1.64
SNCB-204ENST00000508006 CPT1AP50416 773 aa25.28■■□□□ 1.64
SNCB-204ENST00000508006 CDK7P50613 346 aa25.28■■□□□ 1.64
SNCB-204ENST00000508006 IRX5P78411 483 aaPredicted RBP25.28■■□□□ 1.64
SNCB-204ENST00000508006 OR6J1Q8NGC5 347 aa25.28■■□□□ 1.64
SNCB-204ENST00000508006 MLXIPQ9HAP2 919 aa25.28■■□□□ 1.64
SNCB-204ENST00000508006 A6NJR5 290 aa25.27■■□□□ 1.64
SNCB-204ENST00000508006 MSH4O15457 936 aa25.27■■□□□ 1.64
SNCB-204ENST00000508006 NEMFO60524 1076 aa25.27■■□□□ 1.64
SNCB-204ENST00000508006 BAG4O95429 457 aaKnown RBP25.27■■□□□ 1.64
SNCB-204ENST00000508006 TOB1P50616 345 aaPredicted RBP25.27■■□□□ 1.64
SNCB-204ENST00000508006 TMEM63BQ5T3F8 832 aa25.27■■□□□ 1.64
SNCB-204ENST00000508006 FERMT3Q86UX7 667 aa25.27■■□□□ 1.64
SNCB-204ENST00000508006 SLFN12Q8IYM2 578 aa25.27■■□□□ 1.64
SNCB-204ENST00000508006 PPTC7Q8NI37 304 aa25.27■■□□□ 1.64
SNCB-204ENST00000508006 ETNPPLQ8TBG4 499 aa25.27■■□□□ 1.64
SNCB-204ENST00000508006 SLC5A5Q92911 643 aa25.27■■□□□ 1.64
SNCB-204ENST00000508006 GAS2L1Q99501 681 aaPredicted RBP25.27■■□□□ 1.64
SNCB-204ENST00000508006 PPP1R12CQ9BZL4 782 aa25.27■■□□□ 1.64
SNCB-204ENST00000508006 KCNMB3Q9NPA1 279 aa25.27■■□□□ 1.64
SNCB-204ENST00000508006 SLC37A4O43826 429 aa25.26■■□□□ 1.63
SNCB-204ENST00000508006 ZEB2O60315 1214 aa25.26■■□□□ 1.63
SNCB-204ENST00000508006 KPNA6O60684 536 aa25.26■■□□□ 1.63
SNCB-204ENST00000508006 CSF2RAP15509 400 aa25.26■■□□□ 1.63
SNCB-204ENST00000508006 CYFIP1Q7L576 1253 aa25.26■■□□□ 1.63
SNCB-204ENST00000508006 COPS5Q92905 334 aa25.26■■□□□ 1.63
SNCB-204ENST00000508006 LAD1O00515 517 aa25.25■■□□□ 1.63
SNCB-204ENST00000508006 DHX15O43143 795 aaKnown RBP25.25■■□□□ 1.63
SNCB-204ENST00000508006 BRD1O95696 1058 aa25.25■■□□□ 1.63
SNCB-204ENST00000508006 DDIT3P35638 169 aa25.25■■□□□ 1.63
SNCB-204ENST00000508006 ITGB3BPQ13352 177 aaPredicted RBP25.25■■□□□ 1.63
SNCB-204ENST00000508006 FSCN1Q16658 493 aaKnown RBP25.25■■□□□ 1.63
SNCB-204ENST00000508006 TMEM240Q5SV17 173 aa25.25■■□□□ 1.63
SNCB-204ENST00000508006 PPM1EQ8WY54 764 aa25.25■■□□□ 1.63
SNCB-204ENST00000508006 JPH1Q9HDC5 661 aaPredicted RBP25.25■■□□□ 1.63
SNCB-204ENST00000508006 PRDM6Q9NQX0 595 aa25.25■■□□□ 1.63
SNCB-204ENST00000508006 SLC9A2Q9UBY0 812 aa25.25■■□□□ 1.63
SNCB-204ENST00000508006 TCEAL9Q9UHQ7 104 aa25.25■■□□□ 1.63
SNCB-204ENST00000508006 CTAGE5O15320 804 aa25.24■■□□□ 1.63
SNCB-204ENST00000508006 PPFIA4O75335 1185 aa25.24■■□□□ 1.63
SNCB-204ENST00000508006 BMP15O95972 392 aa25.24■■□□□ 1.63
SNCB-204ENST00000508006 F13A1P00488 732 aa25.24■■□□□ 1.63
SNCB-204ENST00000508006 ACRP10323 421 aa25.24■■□□□ 1.63
SNCB-204ENST00000508006 ATP2B1P20020 1258 aa25.24■■□□□ 1.63
SNCB-204ENST00000508006 MCM7P33993 719 aa25.24■■□□□ 1.63
SNCB-204ENST00000508006 NUCB2P80303 420 aa25.24■■□□□ 1.63
SNCB-204ENST00000508006 KRT76Q01546 638 aa25.24■■□□□ 1.63
SNCB-204ENST00000508006 CALCRLQ16602 461 aa25.24■■□□□ 1.63
SNCB-204ENST00000508006 C16orf59Q7L2K0 433 aa25.24■■□□□ 1.63
SNCB-204ENST00000508006 SPATA33Q96N06 139 aa25.24■■□□□ 1.63
SNCB-204ENST00000508006 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.24■■□□□ 1.63
SNCB-204ENST00000508006 GRXCR1A8MXD5 290 aa25.23■■□□□ 1.63
SNCB-204ENST00000508006 WNT7AO00755 349 aa25.23■■□□□ 1.63
SNCB-204ENST00000508006 PSMD10O75832 226 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms