RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 H7C1D1 291 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 ZRANB2O95218 330 aaKnown RBP eCLIP5.31□□□□□ -1.56
USP53-204ENST00000507906 NTRK1P04629 796 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 ZGLP1P0C6A0 271 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 PF4V1P10720 104 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 TACR1P25103 407 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 KIF11P52732 1056 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 PHC1P78364 1004 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 UBE4AQ14139 1066 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 EPM2AIP1Q7L775 607 aaPredicted RBP5.31□□□□□ -1.56
USP53-204ENST00000507906 SPRED2Q7Z698 418 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 TIFAQ96CG3 184 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 HRASLS5Q96KN8 279 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 ZDHHC5Q9C0B5 715 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 IMPACTQ9P2X3 320 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 SRPK3Q9UPE1 567 aa5.31□□□□□ -1.56
USP53-204ENST00000507906 VSTM5A8MXK1 200 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 SLC27A2O14975 620 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 SNUPNO95149 360 aaKnown RBP5.3□□□□□ -1.56
USP53-204ENST00000507906 H2AFB1P0C5Y9 115 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 H2AFB2P0C5Z0 115 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 LPOP22079 712 aaPredicted RBP5.3□□□□□ -1.56
USP53-204ENST00000507906 CCND1P24385 295 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 SPIRE1Q08AE8 756 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 MOGSQ13724 837 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 GALEQ14376 348 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 HSF5Q4G112 596 aaPredicted RBP5.3□□□□□ -1.56
USP53-204ENST00000507906 CATSPEREQ5SY80 951 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 SYCP2LQ5T4T6 812 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 CMTR2Q8IYT2 770 aaKnown RBP5.3□□□□□ -1.56
USP53-204ENST00000507906 ZNF610Q8N9Z0 462 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 UHMK1Q8TAS1 419 aaKnown RBP5.3□□□□□ -1.56
USP53-204ENST00000507906 CLEC4DQ8WXI8 215 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 RTF1Q92541 710 aaKnown RBP5.3□□□□□ -1.56
USP53-204ENST00000507906 ASIC4Q96FT7 647 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 EPB41L1Q9H4G0 881 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 PRDM12Q9H4Q4 367 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 SP110Q9HB58 689 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 SLC6A20Q9NP91 592 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 OBP2AQ9NY56 170 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.3□□□□□ -1.56
USP53-204ENST00000507906 DSEQ9UL01 958 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 SIT1Q9Y3P8 196 aa5.3□□□□□ -1.56
USP53-204ENST00000507906 A0A1W2PQ45 241 aaPredicted RBP5.29□□□□□ -1.56
USP53-204ENST00000507906 A0A1W2PQY0 241 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 TRIM75PA6NK02 468 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 CAND2O75155 1236 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 DGKIO75912 1065 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 TGFB1P01137 390 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 ENDOUP21128 410 aaKnown RBP5.29□□□□□ -1.56
USP53-204ENST00000507906 LSP1P33241 339 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 RECQLP46063 649 aaPredicted RBP5.29□□□□□ -1.56
USP53-204ENST00000507906 RTP1P59025 263 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 PRKCQQ04759 706 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 FAPQ12884 760 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 IKZF1Q13422 519 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 MSMPQ1L6U9 139 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 TIGD5Q53EQ6 642 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 ZNF574Q6ZN55 896 aaPredicted RBP5.29□□□□□ -1.56
USP53-204ENST00000507906 CEP128Q6ZU80 1094 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 RIOX2Q8IUF8 465 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 LZTR1Q8N653 840 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 JADE3Q92613 823 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 CCDC136Q96JN2 1154 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 C16orf92Q96LL3 132 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 SLC12A5Q9H2X9 1139 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 RXFP1Q9HBX9 757 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 PRDM7Q9NQW5 492 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 MKS1Q9NXB0 559 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 SLAMF8Q9P0V8 285 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 DDX20Q9UHI6 824 aaKnown RBP5.29□□□□□ -1.56
USP53-204ENST00000507906 VAV3Q9UKW4 847 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 ANKRD6Q9Y2G4 727 aa5.29□□□□□ -1.56
USP53-204ENST00000507906 NOC2LQ9Y3T9 749 aaKnown RBP5.29□□□□□ -1.56
USP53-204ENST00000507906 ACOT7O00154 380 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 CLASP2O75122 1294 aaKnown RBP5.28□□□□□ -1.56
USP53-204ENST00000507906 TADA3O75528 432 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 C4BPAP04003 597 aaKnown RBP5.28□□□□□ -1.56
USP53-204ENST00000507906 CD8BP10966 210 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 THBS2P35442 1172 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 FXR1P51114 621 aaKnown RBP eCLIP5.28□□□□□ -1.56
USP53-204ENST00000507906 GALK1P51570 392 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 GRM3Q14832 879 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 TMEM132BQ14DG7 1078 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 ZNF174Q15697 407 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 CPSF6Q16630 551 aaKnown RBP eCLIP5.28□□□□□ -1.56
USP53-204ENST00000507906 FIGNQ5HY92 759 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 TMEM240Q5SV17 173 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 GPR158Q5T848 1215 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 CCSAPQ6IQ19 270 aaPredicted RBP5.28□□□□□ -1.56
USP53-204ENST00000507906 CXorf57Q6NSI4 855 aaKnown RBP5.28□□□□□ -1.56
USP53-204ENST00000507906 SLC4A10Q6U841 1118 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 KSR2Q6VAB6 950 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 NFXL1Q6ZNB6 911 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 PNMA8AQ86V59 439 aaPredicted RBP5.28□□□□□ -1.56
USP53-204ENST00000507906 DGKHQ86XP1 1220 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 PANK1Q8TE04 598 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 USP33Q8TEY7 942 aa5.28□□□□□ -1.56
USP53-204ENST00000507906 BCL7CQ8WUZ0 217 aaPredicted RBP5.28□□□□□ -1.56
USP53-204ENST00000507906 ASB11Q8WXH4 323 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms