RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 HSDL1Q3SXM5 330 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 MCMDC2Q4G0Z9 681 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 TRAF7Q6Q0C0 670 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 HFE2Q6ZVN8 426 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 ZNF589Q86UQ0 364 aaPredicted RBP6.71□□□□□ -1.34
GYPB-208ENST00000507009 FCHSD1Q86WN1 690 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 TMEM192Q8IY95 271 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 NEK9Q8TD19 979 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 SEPT8Q92599 483 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 ESR2Q92731 530 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 EVI5LQ96CN4 794 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 PABPC5Q96DU9 382 aaKnown RBP6.71□□□□□ -1.34
GYPB-208ENST00000507009 IWS1Q96ST2 819 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 PHOX2BQ99453 314 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 NSUN3Q9H649 340 aaKnown RBP6.71□□□□□ -1.34
GYPB-208ENST00000507009 MLXIPQ9HAP2 919 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 HELLSQ9NRZ9 838 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 TCP11L1Q9NUJ3 509 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 WDR70Q9NW82 654 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 MUTYHQ9UIF7 546 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 MRPL11Q9Y3B7 192 aaKnown RBP6.71□□□□□ -1.34
GYPB-208ENST00000507009 SUPT16HQ9Y5B9 1047 aaKnown RBP6.71□□□□□ -1.34
GYPB-208ENST00000507009 PCDHB15Q9Y5E8 787 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 EMSYQ7Z589 1322 aa6.71□□□□□ -1.34
GYPB-208ENST00000507009 DOCK5Q9H7D0 1870 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 ATG2AQ2TAZ0 1938 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 B4E1Z4 1266 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 H3BNC9 293 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 STXBP3O00186 592 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 HAS3O00219 553 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 NOP56O00567 594 aaKnown RBP6.7□□□□□ -1.34
GYPB-208ENST00000507009 ZNF213O14771 459 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 GRM6O15303 877 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 LINC01565O15544 149 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 KDM4AO75164 1064 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 SMIM10L2AP0DMW4 78 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 SMIM10L2BP0DMW5 78 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 SNHG28P0DPA3 235 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 GTF2F1P35269 517 aaKnown RBP eCLIP6.7□□□□□ -1.34
GYPB-208ENST00000507009 HTRA4P83105 476 aaPredicted RBP6.7□□□□□ -1.34
GYPB-208ENST00000507009 ARHGAP4P98171 946 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 PLEKHG4Q58EX7 1191 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 CELF3Q5SZQ8 465 aaKnown RBP6.7□□□□□ -1.34
GYPB-208ENST00000507009 UTP14CQ5TAP6 766 aaKnown RBP6.7□□□□□ -1.34
GYPB-208ENST00000507009 NYAP1Q6ZVC0 841 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 SERINC5Q86VE9 423 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 IQCA1Q86XH1 822 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 TRIM50Q86XT4 487 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 HOMER1Q86YM7 354 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 ADHFE1Q8IWW8 467 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 FIBCD1Q8N539 461 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 RGS22Q8NE09 1264 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 IL31RAQ8NI17 732 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 PIBF1Q8WXW3 757 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 GPKOWQ92917 476 aaPredicted RBP eCLIP6.7□□□□□ -1.34
GYPB-208ENST00000507009 IL17RAQ96F46 866 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 TTC14Q96N46 770 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 SAMD11Q96NU1 681 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 UPF3BQ9BZI7 483 aaKnown RBP6.7□□□□□ -1.34
GYPB-208ENST00000507009 RNF41Q9H4P4 317 aaPredicted RBP6.7□□□□□ -1.34
GYPB-208ENST00000507009 BCAS3Q9H6U6 928 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 SETD4Q9NVD3 440 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 CCDC171Q6TFL3 1326 aa6.7□□□□□ -1.34
GYPB-208ENST00000507009 RALGAPA2Q2PPJ7 1873 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.69□□□□□ -1.34
GYPB-208ENST00000507009 H3BRB1 525 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 LGALS2P05162 132 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 FGRP09769 529 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 PARP1P09874 1014 aaKnown RBP6.69□□□□□ -1.34
GYPB-208ENST00000507009 GHRP10912 638 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 UBA1P22314 1058 aaKnown RBP6.69□□□□□ -1.34
GYPB-208ENST00000507009 CCND2P30279 289 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 NDUFV1P49821 464 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 SP2Q02086 613 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 DLX2Q07687 328 aaPredicted RBP6.69□□□□□ -1.34
GYPB-208ENST00000507009 HYAL1Q12794 435 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 ASPRV1Q53RT3 343 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 MYSM1Q5VVJ2 828 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 DIEXFQ68CQ4 756 aaKnown RBP6.69□□□□□ -1.34
GYPB-208ENST00000507009 PACS2Q86VP3 889 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 RNF135Q8IUD6 432 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 STAG2Q8N3U4 1231 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 TOP1MTQ969P6 601 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 EMID1Q96A84 441 aaPredicted RBP6.69□□□□□ -1.34
GYPB-208ENST00000507009 MFSD14AQ96MC6 490 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 PDCD2LQ9BRP1 358 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 C16orf70Q9BSU1 422 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 AMNQ9BXJ7 453 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 RNPEPQ9H4A4 650 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 TUT1Q9H6E5 874 aaKnown RBP6.69□□□□□ -1.34
GYPB-208ENST00000507009 JMJD4Q9H9V9 463 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 ALG13Q9NP73 1137 aaKnown RBP6.69□□□□□ -1.34
GYPB-208ENST00000507009 FAM86C1Q9NVL1 165 aa6.69□□□□□ -1.34
GYPB-208ENST00000507009 TSR3Q9UJK0 312 aaKnown RBP6.69□□□□□ -1.34
GYPB-208ENST00000507009 KLRF2D3W0D1 207 aa6.68□□□□□ -1.34
GYPB-208ENST00000507009 OPLAHO14841 1288 aa6.68□□□□□ -1.34
GYPB-208ENST00000507009 MBTPS2O43462 519 aa6.68□□□□□ -1.34
GYPB-208ENST00000507009 PPP1R11O60927 126 aaPredicted RBP6.68□□□□□ -1.34
GYPB-208ENST00000507009 PPFIA4O75335 1185 aa6.68□□□□□ -1.34
GYPB-208ENST00000507009 LTBRP36941 435 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms