RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 SF3A1Q15459 793 aaKnown RBP5.47□□□□□ -1.53
SSBP2-206ENST00000506960 PRAMEF18Q5VWM3 479 aa5.47□□□□□ -1.53
SSBP2-206ENST00000506960 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.47□□□□□ -1.53
SSBP2-206ENST00000506960 CYP4F22Q6NT55 531 aa5.47□□□□□ -1.53
SSBP2-206ENST00000506960 NSMFQ6X4W1 530 aa5.47□□□□□ -1.53
SSBP2-206ENST00000506960 LBX2Q6XYB7 198 aa5.47□□□□□ -1.53
SSBP2-206ENST00000506960 PROSER1Q86XN7 944 aa5.47□□□□□ -1.53
SSBP2-206ENST00000506960 RBM12BQ8IXT5 1001 aaKnown RBP5.47□□□□□ -1.53
SSBP2-206ENST00000506960 DCAF4Q8WV16 495 aa5.47□□□□□ -1.53
SSBP2-206ENST00000506960 ZCCHC14Q8WYQ9 949 aaKnown RBP5.47□□□□□ -1.53
SSBP2-206ENST00000506960 MBD6Q96DN6 1003 aa5.47□□□□□ -1.53
SSBP2-206ENST00000506960 YTHDC1Q96MU7 727 aaKnown RBP5.47□□□□□ -1.53
SSBP2-206ENST00000506960 CLIC6Q96NY7 704 aa5.47□□□□□ -1.53
SSBP2-206ENST00000506960 TMEM209Q96SK2 561 aa5.47□□□□□ -1.53
SSBP2-206ENST00000506960 DEF6Q9H4E7 631 aa5.47□□□□□ -1.53
SSBP2-206ENST00000506960 PPP1R1BQ9UD71 204 aaPredicted RBP5.47□□□□□ -1.53
SSBP2-206ENST00000506960 B4GALT3O60512 393 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 IL13P35225 146 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 GRIN1Q05586 938 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 DPTQ07507 201 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 KIZQ2M2Z5 673 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 STYK1Q6J9G0 422 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 OTOP3Q7RTS5 596 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 LIMS2Q7Z4I7 341 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 AMER2Q8N7J2 671 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 TTLL11Q8NHH1 800 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 CLEC4DQ8WXI8 215 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 LCORQ96JN0 433 aaPredicted RBP5.46□□□□□ -1.54
SSBP2-206ENST00000506960 TRIM55Q9BYV6 548 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 HSPBP1Q9NZL4 362 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 CROTQ9UKG9 612 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 MSRB2Q9Y3D2 182 aa5.46□□□□□ -1.54
SSBP2-206ENST00000506960 TRAV20A0A0B4J274 112 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 C9orf118A6NHY6 69 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 MAFKO60675 156 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 LTFP02788 710 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 COL6A2P12110 1019 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 GPR85P60893 370 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 TUSC3Q13454 348 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 HABP4Q5JVS0 413 aaKnown RBP5.45□□□□□ -1.54
SSBP2-206ENST00000506960 PHF19Q5T6S3 580 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 SPATC1Q76KD6 591 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 TRIM48Q8IWZ4 208 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 LRRC47Q8N1G4 583 aaKnown RBP5.45□□□□□ -1.54
SSBP2-206ENST00000506960 UHMK1Q8TAS1 419 aaKnown RBP5.45□□□□□ -1.54
SSBP2-206ENST00000506960 SREK1Q8WXA9 508 aaKnown RBP5.45□□□□□ -1.54
SSBP2-206ENST00000506960 KCNJ15Q99712 375 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 ZFYVE21Q9BQ24 234 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 L2HGDHQ9H9P8 463 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 TESMINQ9Y4I5 508 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 TELO2Q9Y4R8 837 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 ASXL2Q76L83 1435 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 PCSK5Q92824 1860 aa5.45□□□□□ -1.54
SSBP2-206ENST00000506960 NKRFO15226 690 aaKnown RBP eCLIP5.44□□□□□ -1.54
SSBP2-206ENST00000506960 ADCY3O60266 1144 aa5.44□□□□□ -1.54
SSBP2-206ENST00000506960 CYP1A1P04798 512 aaPredicted RBP5.44□□□□□ -1.54
SSBP2-206ENST00000506960 COL6A1P12109 1028 aa5.44□□□□□ -1.54
SSBP2-206ENST00000506960 ATP2B1P20020 1258 aa5.44□□□□□ -1.54
SSBP2-206ENST00000506960 ABHD18Q0P651 414 aa5.44□□□□□ -1.54
SSBP2-206ENST00000506960 IFRD2Q12894 506 aaPredicted RBP5.44□□□□□ -1.54
SSBP2-206ENST00000506960 DTX3Q8N9I9 347 aa5.44□□□□□ -1.54
SSBP2-206ENST00000506960 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.44□□□□□ -1.54
SSBP2-206ENST00000506960 WRNIP1Q96S55 665 aa5.44□□□□□ -1.54
SSBP2-206ENST00000506960 TCAF1Q9Y4C2 921 aa5.44□□□□□ -1.54
SSBP2-206ENST00000506960 STK10O94804 968 aaKnown RBP5.43□□□□□ -1.54
SSBP2-206ENST00000506960 SOD2P04179 222 aa5.43□□□□□ -1.54
SSBP2-206ENST00000506960 GNAT1P11488 350 aa5.43□□□□□ -1.54
SSBP2-206ENST00000506960 GTF2F1P35269 517 aaKnown RBP eCLIP5.43□□□□□ -1.547e-7■■■■■ 41.5
SSBP2-206ENST00000506960 PKN3Q6P5Z2 889 aa5.43□□□□□ -1.54
SSBP2-206ENST00000506960 SCUBE1Q8IWY4 988 aa5.43□□□□□ -1.54
SSBP2-206ENST00000506960 ZNF669Q96BR6 464 aaPredicted RBP5.43□□□□□ -1.54
SSBP2-206ENST00000506960 CRAMP1Q96RY5 1269 aa5.43□□□□□ -1.54
SSBP2-206ENST00000506960 SPATA9Q9BWV2 254 aa5.43□□□□□ -1.54
SSBP2-206ENST00000506960 TMEM168Q9H0V1 697 aa5.43□□□□□ -1.54
SSBP2-206ENST00000506960 IPPKQ9H8X2 491 aa5.43□□□□□ -1.54
SSBP2-206ENST00000506960 CD248Q9HCU0 757 aa5.43□□□□□ -1.54
SSBP2-206ENST00000506960 DLL4Q9NR61 685 aa5.43□□□□□ -1.54
SSBP2-206ENST00000506960 USP35Q9P2H5 1018 aa5.43□□□□□ -1.54
SSBP2-206ENST00000506960 TRAF6Q9Y4K3 522 aa5.43□□□□□ -1.54
SSBP2-206ENST00000506960 MUSKO15146 869 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 CYP7B1O75881 506 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 FAHP16930 419 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 SELENOPP49908 381 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 SPIRE1Q08AE8 756 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 ICAM4Q14773 271 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 PAN2Q504Q3 1202 aaKnown RBP5.42□□□□□ -1.54
SSBP2-206ENST00000506960 VASNQ6EMK4 673 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 TRMT10BQ6PF06 316 aaKnown RBP5.42□□□□□ -1.54
SSBP2-206ENST00000506960 PLEKHH3Q7Z736 793 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 PALM2Q8IXS6 379 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 CKAP2LQ8IYA6 745 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 IFNL3Q8IZI9 196 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 VOPP1Q96AW1 172 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 PDGFDQ9GZP0 370 aaPredicted RBP5.42□□□□□ -1.54
SSBP2-206ENST00000506960 PPP4R1LQ9P1A2 415 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 FTSJ1Q9UET6 329 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 PFDN2Q9UHV9 154 aa5.42□□□□□ -1.54
SSBP2-206ENST00000506960 PDPK1O15530 556 aa5.41□□□□□ -1.54
SSBP2-206ENST00000506960 LAMTOR5O43504 91 aa5.41□□□□□ -1.54
SSBP2-206ENST00000506960 DIAPH1O60610 1272 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms