RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 TELO2Q9Y4R8 837 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 REV3LO60673 3130 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 KIAA1671Q9BY89 1806 aa9.52□□□□□ -0.89
SNF8-204ENST00000506104 PNMA6FA0A0J9YX94 578 aa9.51□□□□□ -0.89
SNF8-204ENST00000506104 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.51□□□□□ -0.89
SNF8-204ENST00000506104 PALM3A6NDB9 673 aaPredicted RBP9.51□□□□□ -0.89
SNF8-204ENST00000506104 IGHDP01880 384 aa9.51□□□□□ -0.89
SNF8-204ENST00000506104 NBR1Q14596 966 aa9.51□□□□□ -0.89
SNF8-204ENST00000506104 SEC23AQ15436 765 aa9.51□□□□□ -0.89
SNF8-204ENST00000506104 SPOUT1Q5T280 376 aaKnown RBP9.51□□□□□ -0.89
SNF8-204ENST00000506104 USP17L6PQ6QN14 398 aa9.51□□□□□ -0.89
SNF8-204ENST00000506104 METTL7BQ6UX53 244 aa9.51□□□□□ -0.89
SNF8-204ENST00000506104 RUFY4Q6ZNE9 571 aa9.51□□□□□ -0.89
SNF8-204ENST00000506104 NLRX1Q86UT6 975 aa9.51□□□□□ -0.89
SNF8-204ENST00000506104 TICAM2Q86XR7 235 aa9.51□□□□□ -0.89
SNF8-204ENST00000506104 LMBR1Q8WVP7 490 aa9.51□□□□□ -0.89
SNF8-204ENST00000506104 APBB2Q92870 758 aa9.51□□□□□ -0.89
SNF8-204ENST00000506104 PABPC5Q96DU9 382 aaKnown RBP9.51□□□□□ -0.89
SNF8-204ENST00000506104 RRP36Q96EU6 259 aaKnown RBP9.51□□□□□ -0.89
SNF8-204ENST00000506104 GPR20Q99678 358 aa9.51□□□□□ -0.89
SNF8-204ENST00000506104 C11orf84Q9BUA3 381 aaPredicted RBP9.51□□□□□ -0.89
SNF8-204ENST00000506104 MYL10Q9BUA6 226 aa9.51□□□□□ -0.89
SNF8-204ENST00000506104 SENP2Q9HC62 589 aa9.51□□□□□ -0.89
SNF8-204ENST00000506104 MAP3K20Q9NYL2 800 aaKnown RBP9.51□□□□□ -0.89
SNF8-204ENST00000506104 M0QZ92 97 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 GRM6O15303 877 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 FIBPO43427 364 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 PPFIA3O75145 1194 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 GTF2F1P35269 517 aaKnown RBP eCLIP9.5□□□□□ -0.89
SNF8-204ENST00000506104 TCF7P36402 384 aaPredicted RBP9.5□□□□□ -0.89
SNF8-204ENST00000506104 NDUFV1P49821 464 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 NT5C2P49902 561 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 MRPS9P82933 396 aaKnown RBP9.5□□□□□ -0.89
SNF8-204ENST00000506104 NUCB1Q02818 461 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 TMEM62Q0P6H9 643 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 PPFIA1Q13136 1202 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 MKRN4PQ13434 485 aaPredicted RBP9.5□□□□□ -0.89
SNF8-204ENST00000506104 RAB11FIP4Q86YS3 637 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 SAMD3Q8N6K7 520 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 NCOA7Q8NI08 942 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 CTCFLQ8NI51 663 aaPredicted RBP9.5□□□□□ -0.89
SNF8-204ENST00000506104 SP7Q8TDD2 431 aaPredicted RBP9.5□□□□□ -0.89
SNF8-204ENST00000506104 DNAJB3Q8WWF6 145 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 RUFY2Q8WXA3 655 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 ZBTB10Q96DT7 871 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 UPF3BQ9BZI7 483 aaKnown RBP9.5□□□□□ -0.89
SNF8-204ENST00000506104 ALG13Q9NP73 1137 aaKnown RBP9.5□□□□□ -0.89
SNF8-204ENST00000506104 LRFN2Q9ULH4 789 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 SPTBN5Q9NRC6 3674 aaKnown RBP9.5□□□□□ -0.89
SNF8-204ENST00000506104 TRANK1O15050 2925 aa9.5□□□□□ -0.89
SNF8-204ENST00000506104 hCG_1642624A0A1W2PR95 340 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 SPATA31C2B4DYI2 1134 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 STXBP3O00186 592 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 LINC01565O15544 149 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 CAND2O75155 1236 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 CHRNA1P02708 482 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 HOXD8P13378 290 aaPredicted RBP9.49□□□□□ -0.89
SNF8-204ENST00000506104 BMPR1AP36894 532 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 MRE11P49959 708 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 PTH1RQ03431 593 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 ZP2Q05996 745 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 SEMA3FQ13275 785 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 GRIK4Q16099 956 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 SLC35G1Q2M3R5 365 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 CASC1Q6TDU7 716 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 RBM23Q86U06 439 aaKnown RBP9.49□□□□□ -0.89
SNF8-204ENST00000506104 SMC5Q8IY18 1101 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 CMTR1Q8N1G2 835 aaKnown RBP9.49□□□□□ -0.89
SNF8-204ENST00000506104 CCDC82Q8N4S0 544 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 EXOC6Q8TAG9 804 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 NEK9Q8TD19 979 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 MICAL1Q8TDZ2 1067 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 MTMR8Q96EF0 704 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 IL25Q9H293 177 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 RIOX1Q9H6W3 641 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 MUTYHQ9UIF7 546 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 TUBE1Q9UJT0 475 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 TRPC6Q9Y210 931 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 GINS2Q9Y248 185 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 CDY2AQ9Y6F7 541 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 EVPLQ92817 2033 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 ADGRA3Q8IWK6 1321 aa9.49□□□□□ -0.89
SNF8-204ENST00000506104 MUC6Q6W4X9 2439 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 CCDC69A6NI79 296 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 E7EWF7 191 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 CYTH3O43739 400 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 STAM2O75886 525 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 CYP21A2P08686 494 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 RXRAP19793 462 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 CD52P31358 61 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 IRS1P35568 1242 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 DLX2Q07687 328 aaPredicted RBP9.48□□□□□ -0.89
SNF8-204ENST00000506104 HYAL1Q12794 435 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 LPIN1Q14693 890 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 UBE2SQ16763 222 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 ADHFE1Q8IWW8 467 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 SEPT1Q8WYJ6 367 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 PPP2R3CQ969Q6 453 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 FBXL18Q96ME1 805 aa9.48□□□□□ -0.89
SNF8-204ENST00000506104 INPP4AQ96PE3 977 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms