RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 ARHGAP36Q6ZRI8 547 aa5.73□□□□□ -1.49
CHD1-203ENST00000505657 STK32CQ86UX6 486 aa5.73□□□□□ -1.49
CHD1-203ENST00000505657 DHX37Q8IY37 1157 aaKnown RBP5.73□□□□□ -1.49
CHD1-203ENST00000505657 SYNPOQ8N3V7 929 aa5.73□□□□□ -1.49
CHD1-203ENST00000505657 FEZ1Q99689 392 aa5.73□□□□□ -1.49
CHD1-203ENST00000505657 GORASP1Q9BQQ3 440 aa5.73□□□□□ -1.49
CHD1-203ENST00000505657 CELF4Q9BZC1 486 aaKnown RBP5.73□□□□□ -1.49
CHD1-203ENST00000505657 SRPK3Q9UPE1 567 aa5.73□□□□□ -1.49
CHD1-203ENST00000505657 ACOT7O00154 380 aa5.72□□□□□ -1.49
CHD1-203ENST00000505657 MAFKO60675 156 aa5.72□□□□□ -1.49
CHD1-203ENST00000505657 THBS2P35442 1172 aa5.72□□□□□ -1.49
CHD1-203ENST00000505657 IGFALSP35858 605 aa5.72□□□□□ -1.49
CHD1-203ENST00000505657 EPHA5P54756 1037 aa5.72□□□□□ -1.49
CHD1-203ENST00000505657 CRY1Q16526 586 aa5.72□□□□□ -1.49
CHD1-203ENST00000505657 TM4SF20Q53R12 229 aa5.72□□□□□ -1.49
CHD1-203ENST00000505657 TMEM177Q53S58 311 aa5.72□□□□□ -1.49
CHD1-203ENST00000505657 FAM47CQ5HY64 1035 aa5.72□□□□□ -1.49
CHD1-203ENST00000505657 ZCCHC8Q6NZY4 707 aaKnown RBP5.72□□□□□ -1.49
CHD1-203ENST00000505657 TEPPQ6URK8 271 aa5.72□□□□□ -1.49
CHD1-203ENST00000505657 KCTD1Q719H9 257 aa5.72□□□□□ -1.49
CHD1-203ENST00000505657 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.72□□□□□ -1.49
CHD1-203ENST00000505657 PROSER1Q86XN7 944 aa5.72□□□□□ -1.49
CHD1-203ENST00000505657 NINJ1Q92982 152 aa5.72□□□□□ -1.49
CHD1-203ENST00000505657 FAN1Q9Y2M0 1017 aa5.72□□□□□ -1.49
CHD1-203ENST00000505657 FAM90A27PA6NNH2 459 aa5.71□□□□□ -1.5
CHD1-203ENST00000505657 M0R2C6 588 aa5.71□□□□□ -1.5
CHD1-203ENST00000505657 ASLP04424 464 aa5.71□□□□□ -1.5
CHD1-203ENST00000505657 CYP2C8P10632 490 aa5.71□□□□□ -1.5
CHD1-203ENST00000505657 HTRA3P83110 453 aa5.71□□□□□ -1.5
CHD1-203ENST00000505657 LACTBP83111 547 aaPredicted RBP5.71□□□□□ -1.5
CHD1-203ENST00000505657 SEC23AQ15436 765 aa5.71□□□□□ -1.5
CHD1-203ENST00000505657 PAN2Q504Q3 1202 aaKnown RBP5.71□□□□□ -1.5
CHD1-203ENST00000505657 CPZQ66K79 652 aa5.71□□□□□ -1.5
CHD1-203ENST00000505657 CNKSR3Q6P9H4 555 aa5.71□□□□□ -1.5
CHD1-203ENST00000505657 NOSTRINQ8IVI9 506 aa5.71□□□□□ -1.5
CHD1-203ENST00000505657 NIM1KQ8IY84 436 aa5.71□□□□□ -1.5
CHD1-203ENST00000505657 TTLL11Q8NHH1 800 aa5.71□□□□□ -1.5
CHD1-203ENST00000505657 DACT3Q96B18 629 aaPredicted RBP5.71□□□□□ -1.5
CHD1-203ENST00000505657 TOE1Q96GM8 510 aaKnown RBP5.71□□□□□ -1.5
CHD1-203ENST00000505657 YIPF4Q9BSR8 244 aa5.71□□□□□ -1.5
CHD1-203ENST00000505657 SAMD15Q9P1V8 674 aa5.71□□□□□ -1.5
CHD1-203ENST00000505657 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.7□□□□□ -1.5
CHD1-203ENST00000505657 SMARCA5O60264 1052 aaPredicted RBP5.7□□□□□ -1.5
CHD1-203ENST00000505657 JMJD7P0C870 316 aa5.7□□□□□ -1.5
CHD1-203ENST00000505657 FAHP16930 419 aa5.7□□□□□ -1.5
CHD1-203ENST00000505657 MECP2P51608 486 aaKnown RBP5.7□□□□□ -1.5
CHD1-203ENST00000505657 ITGA1P56199 1179 aa5.7□□□□□ -1.5
CHD1-203ENST00000505657 DLX2Q07687 328 aaPredicted RBP5.7□□□□□ -1.5
CHD1-203ENST00000505657 SMAD4Q13485 552 aaKnown RBP5.7□□□□□ -1.5
CHD1-203ENST00000505657 VMACQ2NL98 169 aa5.7□□□□□ -1.5
CHD1-203ENST00000505657 VWA3BQ502W6 1294 aa5.7□□□□□ -1.5
CHD1-203ENST00000505657 PIK3R6Q5UE93 754 aa5.7□□□□□ -1.5
CHD1-203ENST00000505657 CDCA2Q69YH5 1023 aaPredicted RBP5.7□□□□□ -1.5
CHD1-203ENST00000505657 LIPIQ6XZB0 460 aa5.7□□□□□ -1.5
CHD1-203ENST00000505657 DBX2Q6ZNG2 339 aa5.7□□□□□ -1.5
CHD1-203ENST00000505657 ADGRG2Q8IZP9 1017 aa5.7□□□□□ -1.5
CHD1-203ENST00000505657 FNIP1Q8TF40 1166 aa5.7□□□□□ -1.5
CHD1-203ENST00000505657 ZSWIM3Q96MP5 696 aa5.7□□□□□ -1.5
CHD1-203ENST00000505657 PWWP2AQ96N64 755 aa5.7□□□□□ -1.5
CHD1-203ENST00000505657 TARS2Q9BW92 718 aaKnown RBP5.7□□□□□ -1.5
CHD1-203ENST00000505657 MAGEC2Q9UBF1 373 aaPredicted RBP5.7□□□□□ -1.5
CHD1-203ENST00000505657 PMF1-BGLAPU3KQ54 211 aa5.7□□□□□ -1.5
CHD1-203ENST00000505657 TRAF5O00463 557 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 KPNA6O60684 536 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 PTPN1P18031 435 aaKnown RBP5.69□□□□□ -1.5
CHD1-203ENST00000505657 GYS2P54840 703 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 ADAM9Q13443 819 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 RTP5Q14D33 572 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 ZNF385BQ569K4 471 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 FIGNQ5HY92 759 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 PHF19Q5T6S3 580 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 BTBD8Q5XKL5 378 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 CNNM4Q6P4Q7 775 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 HHIPL2Q6UWX4 724 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 TMC5Q6UXY8 1006 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 LRRTM3Q86VH5 581 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 TRIM48Q8IWZ4 208 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 MFSD3Q96ES6 412 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 KCNC2Q96PR1 638 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 PDGFDQ9GZP0 370 aaPredicted RBP5.69□□□□□ -1.5
CHD1-203ENST00000505657 MTFR1LQ9H019 292 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 INTS7Q9NVH2 962 aaKnown RBP5.69□□□□□ -1.5
CHD1-203ENST00000505657 SPATA6Q9NWH7 488 aaPredicted RBP5.69□□□□□ -1.5
CHD1-203ENST00000505657 ATP23Q9Y6H3 246 aa5.69□□□□□ -1.5
CHD1-203ENST00000505657 A0A1B0GTL3 188 aa5.68□□□□□ -1.5
CHD1-203ENST00000505657 RFXAPO00287 272 aa5.68□□□□□ -1.5
CHD1-203ENST00000505657 SCDO00767 359 aa5.68□□□□□ -1.5
CHD1-203ENST00000505657 FFAR3O14843 346 aa5.68□□□□□ -1.5
CHD1-203ENST00000505657 GSTA4O15217 222 aa5.68□□□□□ -1.5
CHD1-203ENST00000505657 C4BPAP04003 597 aaKnown RBP5.68□□□□□ -1.5
CHD1-203ENST00000505657 SYN1P17600 705 aa5.68□□□□□ -1.5
CHD1-203ENST00000505657 HSD3B2P26439 372 aa5.68□□□□□ -1.5
CHD1-203ENST00000505657 AFF3P51826 1226 aaKnown RBP5.68□□□□□ -1.5
CHD1-203ENST00000505657 KRTAP10-2P60368 255 aa5.68□□□□□ -1.5
CHD1-203ENST00000505657 NKX3-2P78367 333 aa5.68□□□□□ -1.5
CHD1-203ENST00000505657 PCBP1Q15365 356 aaKnown RBP eCLIP5.68□□□□□ -1.5
CHD1-203ENST00000505657 SKOR2Q2VWA4 1001 aaPredicted RBP5.68□□□□□ -1.5
CHD1-203ENST00000505657 DDX53Q86TM3 631 aaKnown RBP5.68□□□□□ -1.5
CHD1-203ENST00000505657 ZC3H18Q86VM9 953 aaKnown RBP5.68□□□□□ -1.5
CHD1-203ENST00000505657 LINC00482Q8N8I6 264 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms